FC868787

Overview
NameFC868787
Unique NameFC868787
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: ADH6_YEAST (NADP-dependent alcohol dehydrogenase 6 OS=Saccharomyces cerevisiae GN=ADH6 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.259e-25
Identity = 57/170 (33.53%), Postives = 87/170 (51.18%), Query Frame = 1
Query:  139 HPVKAFGWAARDSSGHLSP--FKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXX-ACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPL 639
            +P K  G A +      +P   K+  +   D D+ +K+  CG+C +D+      WG    P+V GHEI G+V +                      +C  C+ C ND E YC K + TYS    DG ++ GGY++++  +E ++V  P+++P   AAPLLC G+TVYSPL
Sbjct:    3 YPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPL 172          

HSP 2 Score: 26.9498 bits (58), Expect = 1.259e-25
Identity = 11/13 (84.62%), Postives = 12/13 (92.31%), Query Frame = 3
Query:  663 GKHVGIVGLGGLG 701
            GK VGIVGLGG+G
Sbjct:  180 GKKVGIVGLGGIG 192          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: YL498_MIMIV (Probable zinc-type alcohol dehydrogenase-like protein L498 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L498 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.171e-23
Identity = 57/214 (26.64%), Postives = 102/214 (47.66%), Query Frame = 1
Query:   25 KQKQKQVLSLVSSRRSNHYNNDNIAVLSSKMAKSREEEHPVKAFGWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTY--------SSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLK 642
            K K++Q+ S +   +    +  ++  L ++  KS ++   + A G+   D    +    F R++  + +V +++ Y GICH+D   I  EW    FP++PGHE+ G V +                     +C  C+ C + +E +C                 I   G ITYGGYS+ ++  + ++ +FP ++ ++  APL+CAG T YSPL+
Sbjct:   32 KYKERQIYSNLKKPQPIDESVISLYSLKNEYQKSPDK---MTALGFGVTDVGKPVELLVFDRKKPTNNEVSIEIYYTGICHSDWHFIVGEWKAD-FPLIPGHELIGRVIDIGPNVDKYSIGDIVCVSPVIDSCGHCKMCTHHIEQHCMNGATEIYNQKTRLPGDIKPSGPITYGGYSNIVIIKQHFVYKFPKNLDIERCAPLMCAGATTYSPLR 241          

HSP 2 Score: 24.6386 bits (52), Expect = 3.171e-23
Identity = 10/13 (76.92%), Postives = 11/13 (84.62%), Query Frame = 3
Query:  663 GKHVGIVGLGGLG 701
            G  VGIVG+GGLG
Sbjct:  248 GMKVGIVGIGGLG 260          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: YJGB_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yjgB OS=Escherichia coli (strain K12) GN=yjgB PE=3 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 3.404e-22
Identity = 52/162 (32.10%), Postives = 90/162 (55.56%), Query Frame = 1
Query:  160 WAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXA--CHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPL 639
            +AA+++ G L  +++   E   +DV ++V YCGICH+DLS I NEWGFS +P+V GHE+ G V                       A  C  C++C +  +  C +      ++ T   +  GG+++ + A+ ++++  P+++ +++A PLLC GITV+ PL
Sbjct:    7 YAAKEAGGELEVYEYDPGELRPQDVEVQVDYCGICHSDLSMIDNEWGFSQYPLVAGHEVIGRVVALGSAAQDKGLQVGQRVGIGWTARSCGHCDACISGNQINCEQ-----GAVPT--IMNRGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKPL 161          

HSP 2 Score: 22.3274 bits (46), Expect = 3.404e-22
Identity = 7/10 (70.00%), Postives = 10/10 (100.00%), Query Frame = 3
Query:  672 VGIVGLGGLG 701
            VG++G+GGLG
Sbjct:  172 VGVIGIGGLG 181          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: ADH7_YEAST (NADP-dependent alcohol dehydrogenase 7 OS=Saccharomyces cerevisiae GN=ADH7 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.974e-20
Identity = 52/154 (33.77%), Postives = 74/154 (48.05%), Query Frame = 1
Query:  184 HLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXX-ACHSCESCANDLENYCPK-MILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPL 639
            H     F  +  GD DV +++  CGIC +D       WG      + GHEI G V +                      AC  CE C +D E YC    +LT  +   DG I+ GG++ H+  +E + ++ P+++P   AAPLLC GITV+SPL
Sbjct:   20 HPKLVSFDPKPFGDHDVDVEIEACGICGSDFHIAVGNWGPVPENQILGHEIIGRVVKVGSKCHTGVKIGDRVGVGAQALACFECERCKSDNEQYCTNDHVLTMWTPYKDGYISQGGFASHVRLHEHFAIQIPENIPSPLAAPLLCGGITVFSPL 173          

HSP 2 Score: 26.5646 bits (57), Expect = 2.974e-20
Identity = 10/13 (76.92%), Postives = 12/13 (92.31%), Query Frame = 3
Query:  663 GKHVGIVGLGGLG 701
            GK VGIVG+GG+G
Sbjct:  181 GKRVGIVGIGGIG 193          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: ADH1_ASPFN (Alcohol dehydrogenase 1 OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=adh1 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 4.796e-17
Identity = 55/168 (32.74%), Postives = 77/168 (45.83%), Query Frame = 1
Query:  160 WA--ARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSL-FPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGL 654
            WA  A    G L   +    + G +++ +KV Y G+CHTDL  +K +W   +  P+V GHE AG V                       +C +CE C    E  CP   L  S    DGT     +  + +    +  + P ++PLDA AP+LCAGITVY  LK  G+
Sbjct:    8 WAQVAEQKGGPLIYKQIPVPKPGPDEILVKVRYSGVCHTDLHALKGDWPLPVKMPLVGGHEGAGVVVARGDLVTEFEIGDHAGLKWLNGSCLACEFCKQADEPLCPNASL--SGYTVDGT-----FQQYAIGKATHASKLPKNVPLDAVAPVLCAGITVYKGLKESGV 168          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: ADH_SCHPO (Alcohol dehydrogenase OS=Schizosaccharomyces pombe GN=adh1 PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 8.182e-17
Identity = 47/144 (32.64%), Postives = 71/144 (49.31%), Query Frame = 1
Query:  214 ETGDEDVRLKVLYCGICHTDLSNIKNEWGF-SLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLK 642
            E G ++V + + Y G+CHTDL  ++ +W   +  P++ GHE AG V +                     +C +CE C    E  CP + L  S    DGT     +  + +AN  +    P+S+PL+ AAP++CAGIT Y  LK
Sbjct:   30 EPGQDEVLVNIKYTGVCHTDLHALQGDWPLPAKMPLIGGHEGAGVVVKVGAGVTRLKIGDRVGVKWMNSSCGNCEYCMKAEETICPHIQL--SGYTVDGT-----FQHYCIANATHATIIPESVPLEVAAPIMCAGITCYRALK 166          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: ADH2_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus GN=adh PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.329e-16
Identity = 46/149 (30.87%), Postives = 67/149 (44.97%), Query Frame = 1
Query:  208 RRETGDEDVRLKVLYCGICHTDLSNIKNEWGFS-LFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFG 651
            R +  + +V +K+  CG+CHTDL     +W      P++PGHE  G V E                     AC  CE C    E  CP  +    S++       GGY+++  A   Y+ + PD++     AP+LCAG+T Y  LK  G
Sbjct:   20 RPKLEEGEVLVKIEACGVCHTDLHAAHGDWPIKPKLPLIPGHEGVGIVVEVAKGVKSIKVGDRVGIPWLYSACGECEYCLTGQETLCPHQLNGGYSVD-------GGYAEYCKAPADYVAKIPDNLDPVEVAPILCAGVTTYKALKVSG 161          

HSP 2 Score: 22.7126 bits (47), Expect = 1.329e-16
Identity = 9/16 (56.25%), Postives = 12/16 (75.00%), Query Frame = 3
Query:  654 SRTGKHVGIVGLGGLG 701
            +R G+ V I G+GGLG
Sbjct:  162 ARPGEWVAIYGIGGLG 177          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: ADH3_EMENI (Alcohol dehydrogenase 3 OS=Emericella nidulans GN=alcC PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.396e-16
Identity = 57/168 (33.93%), Postives = 78/168 (46.43%), Query Frame = 1
Query:  220 GDEDVRLKVLYCGICHTDLSNIKNEWGF-SLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXX--ACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGLVSRCQ 714
            G +++ +K+ Y G+CHTDL  +K +W   S  P++ GHE AG V                         +C SCE C    E  CP   L  S    DGT     +  + +       + PD++PLDAAAP+LCAGITVY  LK  G    +++    A  GL S  Q
Sbjct:   30 GPDEILVKMRYSGVCHTDLHAMKGDWPLPSKMPLIGGHEGAGVVVAKGELVKDEDFKIGDRAGIKWLNGSCLSCEMCMQADEPLCPHASL--SGYTVDGT-----FQQYTIGKAALASKIPDNVPLDAAAPILCAGITVYKGLKESGARPGQTVAIVGAGGGLGSLAQ 190          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: ADH1_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus GN=adhT PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 1.083e-15
Identity = 42/142 (29.58%), Postives = 66/142 (46.48%), Query Frame = 1
Query:  229 DVRLKVLYCGICHTDLSNIKNEWGFS-LFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFG 651
            +V +++  CG+CHTDL     +W      P++PGHE  G + E                     AC  C+ C +  E  C +      S++       GGY+++  A   Y+V+ PD++  + AAP+ CAG+T Y  LK  G
Sbjct:   27 EVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGVIEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCERQQNAGYSVD-------GGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTG 161          

HSP 2 Score: 21.557 bits (44), Expect = 1.083e-15
Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 3
Query:  654 SRTGKHVGIVGLGGLG 701
            ++ G+ V I G+GGLG
Sbjct:  162 AKPGEWVAIYGIGGLG 177          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: ADH3_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 2.377e-15
Identity = 43/142 (30.28%), Postives = 65/142 (45.77%), Query Frame = 1
Query:  229 DVRLKVLYCGICHTDLSNIKNEWGFS-LFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFG 651
            +V +++  CG+CHTDL     +W      P++PGHE  G V E                     AC  C+ C +  E  C        S++       GGY+++  A   Y+V+ PD++  + AAP+ CAG+T Y  LK  G
Sbjct:   27 EVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVD-------GGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTG 161          

HSP 2 Score: 21.557 bits (44), Expect = 2.377e-15
Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 3
Query:  654 SRTGKHVGIVGLGGLG 701
            ++ G+ V I G+GGLG
Sbjct:  162 AKPGEWVAIYGIGGLG 177          
The following BLAST results are available for this feature:
BLAST of FC868787 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
ADH6_YEAST1.259e-2533.53NADP-dependent alcohol dehydrogenase 6 OS=Saccharo... [more]
YL498_MIMIV3.171e-2326.64Probable zinc-type alcohol dehydrogenase-like prot... [more]
YJGB_ECOLI3.404e-2232.10Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
ADH7_YEAST2.974e-2033.77NADP-dependent alcohol dehydrogenase 7 OS=Saccharo... [more]
ADH1_ASPFN4.796e-1732.74Alcohol dehydrogenase 1 OS=Aspergillus flavus (str... [more]
ADH_SCHPO8.182e-1732.64Alcohol dehydrogenase OS=Schizosaccharomyces pombe... [more]
ADH2_BACST1.329e-1630.87Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
ADH3_EMENI1.396e-1633.93Alcohol dehydrogenase 3 OS=Emericella nidulans GN=... [more]
ADH1_BACST1.083e-1529.58Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
ADH3_BACST2.377e-1530.28Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]

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Properties
Property NameValue
Genbank descriptionC31004G07EF AbioticL1 Citrus clementina cDNA clone C31004G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868787 ID=FC868787; Name=FC868787; organism=Citrus clementina; type=EST; length=717bp
TGTACACACATGAATATTCATATGAAACAAAAACAAAAACAGGTACTTTC
ACTCGTCTCATCACGTCGTTCAAACCACTATAATAATGATAACATTGCCG
TTCTCTCATCCAAAATGGCAAAATCACGAGAAGAAGAACATCCAGTAAAG
GCCTTTGGGTGGGCAGCCCGAGACAGCTCCGGCCATCTCTCCCCATTCAA
ATTCTCCAGAAGGGAAACGGGTGATGAGGATGTGAGGCTGAAGGTATTGT
ATTGTGGGATCTGCCATACTGATCTCTCCAACATCAAGAATGAATGGGGC
TTCTCTCTCTTCCCTATGGTTCCTGGGCATGAAATTGCAGGGGAAGTGAC
AGAAGTTGGTAGCAAAGTAAGAAAGGTTAAAGTGGGAGATAAAGTTGGAG
TTGGATGCATGGTCGGTGCATGCCACAGCTGCGAGAGCTGTGCCAATGAC
CTTGAAAATTACTGTCCGAAAATGATACTCACCTACAGTTCCATTAACAC
TGACGGAACAATCACATACGGAGGCTACTCTGATCACATGGTTGCCAATG
AGCGCTACATTGTTCGATTCCCTGATAGCATGCCCCTTGATGCTGCTGCC
CCCCTGCTTTGCGCCGGGATTACCGTGTACAGTCCATTGAAATACTTTGG
ACTAGCAGAACAGGAAAGCATGTAGGCATCGTTGGCCTTGGCGGGCTTGG
TCAGTCGCTGTCAAATT
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