FC868787

Overview
NameFC868787
Unique NameFC868787
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: ADH1_NEUCR (Alcohol dehydrogenase 1 OS=Neurospora crassa GN=adh-1 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.489e-15
Identity = 44/149 (29.53%), Postives = 70/149 (46.98%), Query Frame = 1
Query:  211 RETGDEDVRLKVLYCGICHTDLSNIKNEWGFSL-FPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGL 654
            ++ G ++V + V Y G+CHTDL  +K +W  +   P+V GHE AG V                       +C +C  C    E  CP  +L+  +++       G +  + +A   ++ + P    L+  AP+LCAGITVY  LK  G+
Sbjct:   30 QKPGPDEVLINVKYSGVCHTDLHAMKGDWPLATKMPLVGGHEGAGVVVAKGELVTEVEVGDHAGIKWLNGSCLACSFCMQADEPLCPHALLSGYTVD-------GSFQQYAIAKAAHVAKIPKGCDLETTAPVLCAGITVYKGLKESGV 171          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: ADH1_EMENI (Alcohol dehydrogenase 1 OS=Emericella nidulans GN=alcA PE=3 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 7.658e-15
Identity = 52/166 (31.33%), Postives = 74/166 (44.58%), Query Frame = 1
Query:  220 GDEDVRLKVLYCGICHTDLSNIKNEWGFSL-FPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGLVSRCQ 714
            G + + +K+ Y G+CHTDL  +   W   +  P+V GHE AG V                       +C  CE C    +  C +  L  S    DGT     +  + +    +  + P  +PLDAAAP+LCAGITVY  LK  G+   +++    A  GL S  Q
Sbjct:   30 GPDQILVKIRYSGVCHTDLHAMMGHWPIPVKMPLVGGHEGAGIVVAKGELVHEFEIGDQAGIKWLNGSCGECEFCRQSDDPLCARAQL--SGYTVDGT-----FQQYALGKASHASKIPAGVPLDAAAPVLCAGITVYKGLKEAGVRPGQTVAIVGAGGGLGSLAQ 188          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: ADH5_YEAST (Alcohol dehydrogenase 5 OS=Saccharomyces cerevisiae GN=ADH5 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.202e-13
Identity = 51/165 (30.91%), Postives = 72/165 (43.64%), Query Frame = 1
Query:  214 ETGDEDVRLKVLYCGICHTDLSNIKNEWGFSL-FPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGLVS 705
            E    ++ + V Y G+CH+DL     +W F L FP++ GHE AG V +                      C SCE C    E+ CP   L  +    DGT     + ++  A+       P ++ L   AP+LCAGITVY  LK   +   + +  S A  GL S
Sbjct:   31 EPKPNEILVHVKYSGVCHSDLHAWHGDWPFQLKFPLIGGHEGAGVVVKLGSNVKGWKVGDFAGIKWLNGTCMSCEYCEVGNESQCP--YLDGTGFTHDGT-----FQEYATADAVQAAHIPPNVNLAEVAPILCAGITVYKALKRANVIPGQWVTISGACGGLGS 188          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: ADH5_SACPS (Alcohol dehydrogenase 5 OS=Saccharomyces pastorianus GN=ADH5 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.202e-13
Identity = 51/165 (30.91%), Postives = 72/165 (43.64%), Query Frame = 1
Query:  214 ETGDEDVRLKVLYCGICHTDLSNIKNEWGFSL-FPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGLVS 705
            E    ++ + V Y G+CH+DL     +W F L FP++ GHE AG V +                      C SCE C    E+ CP   L  +    DGT     + ++  A+       P ++ L   AP+LCAGITVY  LK   +   + +  S A  GL S
Sbjct:   31 EPKPNEILVHVKYSGVCHSDLHAWHGDWPFQLKFPLIGGHEGAGVVVKLGSNVKGWKVGDFAGIKWLNGTCMSCEYCEVGNESQCP--YLDGTGFTHDGT-----FQEYATADAVQAAHIPPNVNLAEVAPILCAGITVYKALKRANVIPGQWVTISGACGGLGS 188          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: ADH3_KLULA (Alcohol dehydrogenase 3, mitochondrial OS=Kluyveromyces lactis GN=ADH3 PE=3 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 9.361e-13
Identity = 50/160 (31.25%), Postives = 67/160 (41.88%), Query Frame = 1
Query:  229 DVRLKVLYCGICHTDLSNIKNEWGF-SLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGLVS 705
            ++ + V Y G+CHTDL   K +W   +  P+V GHE AG V                       +C SCE C    E+ CP   L+       G    G +  +  A+     R P    L   AP+LCAG+TVY  LK   L   + +  S A  GL S
Sbjct:   59 EILINVKYSGVCHTDLHAWKGDWPLPTKLPLVGGHEGAGVVVAMGENVKGWNIGDFAGIKWLNGSCMSCEYCELSNESNCPDADLS-------GYTHDGSFQQYATADAVQAARIPKGTDLAEVAPILCAGVTVYKALKSANLKAGDWVAISGAAGGLGS 211          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: ADH2_EMENI (Alcohol dehydrogenase 2 OS=Emericella nidulans GN=alcB PE=3 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.223e-12
Identity = 43/149 (28.86%), Postives = 63/149 (42.28%), Query Frame = 1
Query:  214 ETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPG----HEIAGEVTEXXXXXXXXXXXXXXXXXXXXX--ACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLK 642
            E GD +V + + + G+CH+D   + N W    FP  PG    HE  G+V +                       AC  C  C +  +  C             G  T G +  +++   +Y+   PD +P   AAPLLCAG+TVY+ LK
Sbjct:   32 EPGDNEVLINLTHSGVCHSDFGIMTNTWKILPFPTQPGQVGGHEGVGKVVKLGAGAEASGLKIGDRVGVKWISSACGQCPPCQDGADGLCFNQ-------KVSGYYTPGTFQQYVLGPAQYVTPIPDGLPSAEAAPLLCAGVTVYASLK 173          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: ADH2_KLULA (Alcohol dehydrogenase 2 OS=Kluyveromyces lactis GN=ADH2 PE=3 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.085e-12
Identity = 50/160 (31.25%), Postives = 67/160 (41.88%), Query Frame = 1
Query:  229 DVRLKVLYCGICHTDLSNIKNEWGF-SLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGLVS 705
            ++ + V Y G+CHTDL   K +W   +  P+V GHE AG V                       +C SCE C    E+ CP   L+       G    G +  +  A+     R P    L   AP+LCAG+TVY  LK   L   + +  S A  GL S
Sbjct:   33 ELLINVKYSGVCHTDLHAWKGDWPLPTKLPLVGGHEGAGVVVAMGENVKGWNIGDFAGIKWLNGSCMSCEYCELSNESNCPDADLS-------GYTHDGSFQQYATADAVQAARIPKGTDLAEVAPILCAGVTVYKALKSADLKAGDWVAISGACGGLGS 185          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: ADH1_KLUMA (Alcohol dehydrogenase 1 OS=Kluyveromyces marxianus GN=ADH1 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.085e-12
Identity = 49/160 (30.63%), Postives = 68/160 (42.50%), Query Frame = 1
Query:  229 DVRLKVLYCGICHTDLSNIKNEWGFSL-FPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGLVS 705
            ++ + V Y G+CHTDL   + +W      P+V GHE AG V                       +C SCE C    E  CPK  L+       G    G +  +  A+     R P ++ L   AP+LCAG+TVY  LK   +   + +  S A  GL S
Sbjct:   33 ELLINVKYSGVCHTDLHAWQGDWPLDTKLPLVGGHEGAGIVVAMGENVTGWEIGDYAGIKWLNGSCMSCEECELSNEPNCPKADLS-------GYTHDGSFQQYATADAVQAARIPKNVDLAEVAPILCAGVTVYKALKSAHIKAGDWVAISGACGGLGS 185          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: ADH2_PICST (Alcohol dehydrogenase 2 OS=Pichia stipitis GN=ADH2 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.646e-12
Identity = 50/160 (31.25%), Postives = 65/160 (40.62%), Query Frame = 1
Query:  229 DVRLKVLYCGICHTDLSNIKNEWGFSL-FPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGLVS 705
            ++ + V Y G+CHTDL   K +W      P+V GHE AG V                       +C  CE C    E+ CP   L+       G    G +  +  A+     R P    L   AP+LCAGITVY  LK   L   + +  S A  GL S
Sbjct:   33 ELLINVKYSGVCHTDLHAWKGDWPLDTKLPLVGGHEGAGVVVALGENVTGWEIGDYAGIKWINGSCLQCEYCVTAHESNCPDADLS-------GYTHDGSFQQYATADAIQAARIPKGTDLALIAPILCAGITVYKALKTAQLQAGQWVAVSGAAGGLGS 185          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: ADH1_KLULA (Alcohol dehydrogenase 1 OS=Kluyveromyces lactis GN=ADH1 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.646e-12
Identity = 49/160 (30.63%), Postives = 68/160 (42.50%), Query Frame = 1
Query:  229 DVRLKVLYCGICHTDLSNIKNEWGF-SLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGLVS 705
            ++ + V Y G+CHTDL   K +W   +  P+V GHE AG V                       +C SCE C    E+ CP+  L+       G    G +  +  A+     + P    L   AP+LCAG+TVY  LK   L   + +  S A  GL S
Sbjct:   35 ELLINVKYSGVCHTDLHAWKGDWPLPTKLPLVGGHEGAGVVVAMGENVKGWKIGDFAGIKWLNGSCMSCEYCELSNESNCPEADLS-------GYTHDGSFQQYATADAVQAAKIPVGTDLAEVAPVLCAGVTVYKALKSANLKAGDWVAISGAAGGLGS 187          
The following BLAST results are available for this feature:
BLAST of FC868787 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
ADH1_NEUCR4.489e-1529.53Alcohol dehydrogenase 1 OS=Neurospora crassa GN=ad... [more]
ADH1_EMENI7.658e-1531.33Alcohol dehydrogenase 1 OS=Emericella nidulans GN=... [more]
ADH5_YEAST4.202e-1330.91Alcohol dehydrogenase 5 OS=Saccharomyces cerevisia... [more]
ADH5_SACPS4.202e-1330.91Alcohol dehydrogenase 5 OS=Saccharomyces pastorian... [more]
ADH3_KLULA9.361e-1331.25Alcohol dehydrogenase 3, mitochondrial OS=Kluyvero... [more]
ADH2_EMENI1.223e-1228.86Alcohol dehydrogenase 2 OS=Emericella nidulans GN=... [more]
ADH2_KLULA2.085e-1231.25Alcohol dehydrogenase 2 OS=Kluyveromyces lactis GN... [more]
ADH1_KLUMA2.085e-1230.63Alcohol dehydrogenase 1 OS=Kluyveromyces marxianus... [more]
ADH2_PICST4.646e-1231.25Alcohol dehydrogenase 2 OS=Pichia stipitis GN=ADH2... [more]
ADH1_KLULA4.646e-1230.63Alcohol dehydrogenase 1 OS=Kluyveromyces lactis GN... [more]

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Properties
Property NameValue
Genbank descriptionC31004G07EF AbioticL1 Citrus clementina cDNA clone C31004G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868787 ID=FC868787; Name=FC868787; organism=Citrus clementina; type=EST; length=717bp
TGTACACACATGAATATTCATATGAAACAAAAACAAAAACAGGTACTTTC
ACTCGTCTCATCACGTCGTTCAAACCACTATAATAATGATAACATTGCCG
TTCTCTCATCCAAAATGGCAAAATCACGAGAAGAAGAACATCCAGTAAAG
GCCTTTGGGTGGGCAGCCCGAGACAGCTCCGGCCATCTCTCCCCATTCAA
ATTCTCCAGAAGGGAAACGGGTGATGAGGATGTGAGGCTGAAGGTATTGT
ATTGTGGGATCTGCCATACTGATCTCTCCAACATCAAGAATGAATGGGGC
TTCTCTCTCTTCCCTATGGTTCCTGGGCATGAAATTGCAGGGGAAGTGAC
AGAAGTTGGTAGCAAAGTAAGAAAGGTTAAAGTGGGAGATAAAGTTGGAG
TTGGATGCATGGTCGGTGCATGCCACAGCTGCGAGAGCTGTGCCAATGAC
CTTGAAAATTACTGTCCGAAAATGATACTCACCTACAGTTCCATTAACAC
TGACGGAACAATCACATACGGAGGCTACTCTGATCACATGGTTGCCAATG
AGCGCTACATTGTTCGATTCCCTGATAGCATGCCCCTTGATGCTGCTGCC
CCCCTGCTTTGCGCCGGGATTACCGTGTACAGTCCATTGAAATACTTTGG
ACTAGCAGAACAGGAAAGCATGTAGGCATCGTTGGCCTTGGCGGGCTTGG
TCAGTCGCTGTCAAATT
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