FC868797
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_PELPB (Serine hydroxymethyltransferase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=glyA PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 7.042e-34 Identity = 80/160 (50.00%), Postives = 103/160 (64.38%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 L+ D E+ + I E RQ + LELI SENFTS +VMQA GSVMTNKY+EGYPG RYYGG E++D+AE+L + RA + F D VNVQ SGS +N V ++LKP DRIM LDL HGGHL+HG ++ +E Y ++ TG ID ++ Sbjct: 6 LQKQDSELFEAIAKETGRQTETLELIASENFTSRAVMQACGSVMTNKYAEGYPGKRYYGGCEFVDIAENLARDRAKKLFGCD----YVNVQPHSGSSANMAVLFSVLKPGDRIMGLDLSHGGHLTHG-----SSVNFSGQMYEAHSYGVDRETGCIDMNK 156
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_GEOSM (Serine hydroxymethyltransferase OS=Geobacter sp. (strain M21) GN=glyA PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 7.042e-34 Identity = 75/160 (46.88%), Postives = 102/160 (63.75%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 LE DP +A++I HE RQ LELI SENF S +V++A GSV+TNKY+EGYPG RYYGG +D+ E+L RA E F D VNVQ SGS +N VY ++LKP D ++ ++L HGGHL+HG ++ F +PY +++ T IDY++ Sbjct: 4 LETFDPAVAEVIRHETERQEYNLELIASENFVSPAVLEAQGSVLTNKYAEGYPGKRYYGGCHCVDVVENLAIDRAKELFGAD----HVNVQPHSGSQANMAVYFSVLKPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLFNIVPYGVSKETQTIDYEE 154
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_THEAB (Serine hydroxymethyltransferase OS=Thermosipho africanus (strain TCF52B) GN=glyA PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.197e-34 Identity = 76/156 (48.72%), Postives = 100/156 (64.10%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 DPEI D+I E RQ GLELI SENF S++V++A+GSV+TNKY+EGYPG RYYGG E++D+AE L + RA E F + NVQ SGS +N Y A+ +P D IM + L HGGHL+HG ++ + +PY +N T IDYD+ Sbjct: 9 DPEIYDVILKEWERQEYGLELIASENFASLAVIEAMGSVLTNKYAEGYPGRRYYGGCEWVDVAEKLARDRAKELFNVK----YANVQPHSGSQANMGAYFAVSEPGDTIMGMSLSHGGHLTHG-----ASVNFSGRIYNVVPYGVNPETEVIDYDE 155
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_SYNWW (Serine hydroxymethyltransferase OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=glyA PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.197e-34 Identity = 78/157 (49.68%), Postives = 100/157 (63.69%), Query Frame = 1 Query: 226 VDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 VDPE+A+ IE E+ARQ LELI SENF S +VM A GSVMTNKY+EG PGARYYGG EY+D+ E L + R E F + NVQ SG+ +N VY A L+P IM ++L HGGHL+HG K++ +F + Y +N T IDY++ Sbjct: 11 VDPEVAEAIEKEEARQNNKLELIASENFVSRAVMAAQGSVMTNKYAEGLPGARYYGGCEYVDIVEELARDRVKEIFGAE----HANVQPHSGAQANTAVYFAALQPGQTIMGMNLNHGGHLTHG-----SKVNISGKYFNIVDYGVNRDTERIDYEE 158
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_OENOB (Serine hydroxymethyltransferase OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=glyA PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.197e-34 Identity = 74/156 (47.44%), Postives = 100/156 (64.10%), Query Frame = 1 Query: 226 VDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 693 +DP++A + E+ RQ +EL+ SENF S +V QA GSV+TNKYSEGYPG RYYGGNEYID+AE+L +RA E F + NVQ SGS +NF+ Y A L P D+I+ ++L GGHL+HG +S +E Y+++ T +DYD Sbjct: 6 LDPQLAKAVSGEEERQRHNIELVASENFVSKAVRQAQGSVLTNKYSEGYPGKRYYGGNEYIDIAENLAIERAKELFGVS----YANVQPHSGSSANFEAYMAFLHPGDKILGMNLDSGGHLTHG-----ASVSFSGKMYEAQSYKVDSETELLDYD 152
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_BACV8 (Serine hydroxymethyltransferase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=glyA PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.197e-34 Identity = 78/156 (50.00%), Postives = 97/156 (62.18%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 D I DIIE E RQ KG+ELI SENF S VMQA+GS +TNKY+EGYPG RYYGG E +D +E + R + F + W NVQ SG+ +N V+ A+L P D+ M L+L HGGHLSHG +T I + Y LN+ TG +DYDQ Sbjct: 4 DDLIFDIIEKEHQRQLKGIELIASENFVSDQVMQAMGSCLTNKYAEGYPGKRYYGGCEVVDQSEQIAIDRLKQIFGAE---W-ANVQPHSGAQANAAVFLAVLNPGDKFMGLNLAHGGHLSHGSLVNTS-----GIIYTPCEYNLNKETGRVDYDQ 150
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_SYNFM (Serine hydroxymethyltransferase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=glyA PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.569e-33 Identity = 78/160 (48.75%), Postives = 104/160 (65.00%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 LE +DPEIAD+I E+ RQ LELI SENF S +V +A GSV+TNKY+EGYPG RYYGG E++DMAE L Q+RA + F D E NVQ SGS +N ++ A+L+P D ++ +DL GGHL+HG +S + + Y + + T ID+DQ Sbjct: 4 LERIDPEIADVICEEEKRQRGKLELIASENFVSEAVREAQGSVLTNKYAEGYPGKRYYGGCEFVDMAERLAQERAKKLF--DAEY--ANVQPHSGSQANMAIFFAVLQPGDTVLGMDLRQGGHLTHG-----SPVSFSGKLYNVVSYGVRKDTEQIDFDQ 154
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_CHLPD (Serine hydroxymethyltransferase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=glyA PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.569e-33 Identity = 78/157 (49.68%), Postives = 101/157 (64.33%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYID 687 L++ D E+ + + +E RQ + LELI SENFTS +VMQA GSVMTNKY+EGYPG RYYGG E++D+AE+L + RA + F VNVQ SGS +N V ++LKP DRIM LDL HGGHL+HG ++ +E Y + TG ID Sbjct: 6 LQMQDKEVFEAVVNETVRQTETLELIASENFTSRAVMQACGSVMTNKYAEGYPGKRYYGGCEFVDVAENLARDRAKKLFNCS----YVNVQPHSGSSANMAVLFSVLKPGDRIMGLDLSHGGHLTHG-----SPVNFSGQLYEAHSYGVRRETGCID 153
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_CHLPB (Serine hydroxymethyltransferase OS=Chlorobium phaeobacteroides (strain BS1) GN=glyA PE=3 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 1.569e-33 Identity = 82/160 (51.25%), Postives = 102/160 (63.75%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 L+ D I D I E RQ + LELI SENF S +VM+A GSVMTNKY+EGYPG RYYGG E++D+AE+L + RA + F D VNVQ SGS +N V A+LKP DRIM LDL HGGHL+HG K++ FE Y ++ TG ID ++ Sbjct: 6 LQRQDKGIFDAITAEVRRQTETLELIASENFASRAVMEACGSVMTNKYAEGYPGKRYYGGCEFVDIAENLARDRAKKLFGCD----YVNVQPHSGSSANMGVLFAVLKPGDRIMGLDLSHGGHLTHG-----SKVNFSGQLFEAHSYGVDRETGCIDMNK 156
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_DESDA (Serine hydroxymethyltransferase OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=glyA PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.049e-33 Identity = 78/155 (50.32%), Postives = 96/155 (61.94%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 693 DPEIA I E RQ LELI SEN S +V +A GSV+TNKY+EGYPG RYYGG EY+DM E+L Q+RA F + VNVQ SGS +N Y A+LKP D I+ +DL HGGHL+HG ++ F+ + Y + TG IDYD Sbjct: 8 DPEIAKAIALESQRQMGKLELIASENIVSTAVREAQGSVLTNKYAEGYPGKRYYGGCEYVDMVETLAQERAKLLF----DAQYVNVQPHSGSQANMAAYLAVLKPGDTILGMDLSHGGHLTHG-----SPVNFSGRLFKIISYGVQRETGRIDYD 153 The following BLAST results are available for this feature:
BLAST of FC868797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868797 ID=FC868797; Name=FC868797; organism=Citrus clementina; type=EST; length=697bpback to top |