FC868819
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DDX31_DICDI (Probable ATP-dependent RNA helicase ddx31 OS=Dictyostelium discoideum GN=ddx31 PE=3 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 2.659e-22 Identity = 62/164 (37.80%), Postives = 95/164 (57.93%), Query Frame = 3 Query: 177 TPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLF 668 T +Q A+I + D V A TGSGKTL++++P+V+ L R +II+PTRELSSQIY Q + + +++GG A+ +I + G N+L+ TPGRL D ++ N++ +LDEAD+LLD+GF+K ++ II+ L +RT F Sbjct: 232 THIQEASITPILKGNDALVKAQTGSGKTLSYLIPVVQKLTEQRVTRSDGCYC-VIITPTRELSSQIYEELQKLLKPFYWIVPGIIMGGENRSAEKARIRK-GINILVATPGRLLDHLQNTQSFPTDNIKWCILDEADKLLDLGFEKDVTTIINLLDSKKRTMKF 393
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DBP3_ASPNC (ATP-dependent RNA helicase dbp3 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=dbp3 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.659e-22 Identity = 67/167 (40.12%), Postives = 103/167 (61.68%), Query Frame = 3 Query: 177 TPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP-KLRRTGLFSS 674 T +Q+AT P L S +DV A TGSGKTL F +P ++ L+ ++ KP++ ++ISPTREL+ QI+ F + L D+K + GG VK + ++ + A +++ TPGRL D+ V D ++ LVLDEADR+LD GF++ I II +P R+T +F++ Sbjct: 102 TAIQSATWPFLFSGRDVIGIAETGSGKTLGFGLPCLKNLQDSAKKGKPYKPTAVMISPTRELAMQIHDQISKF-AELVDIKVACIFGG--VKKEEQREALKTAAIVVATPGRLKDLQNDGSV-DLGKVKYLVLDEADRMLDKGFEQDIKDIIRPMPVSKRQTVMFTA 264
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DED1_YEAST (ATP-dependent RNA helicase DED1 OS=Saccharomyces cerevisiae GN=DED1 PE=1 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 3.473e-22 Identity = 66/181 (36.46%), Postives = 107/181 (59.12%), Query Frame = 3 Query: 120 PALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQI----------MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYII 632 P L +LE + A F TPVQ ++P++ + +D+ A TGSGKT F+ P++ + + +P +I++PTREL++QI+ A+ F + VK+ ++ GG + +++IE G +LL+ TPGRL D++ER + N++ LVLDEADR+LDMGF+ QI +I+ Sbjct: 147 PPLDGLLLENIKLARFTKPTPVQKYSVPIVANGRDLMACAQTGSGKTGGFLFPVLSESFKTGPSPQPESQGSFYQRKAYPTAVIMAPTRELATQIFDEAKKF-TYRSWVKACVVYGGSPIGNQLREIER-GCDLLVATPGRLNDLLERGKI-SLANVKYLVLDEADRMLDMGFEPQIRHIV 324
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DED1_YEAS7 (ATP-dependent RNA helicase DED1 OS=Saccharomyces cerevisiae (strain YJM789) GN=DED1 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.473e-22 Identity = 66/181 (36.46%), Postives = 107/181 (59.12%), Query Frame = 3 Query: 120 PALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQI----------MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYII 632 P L +LE + A F TPVQ ++P++ + +D+ A TGSGKT F+ P++ + + +P +I++PTREL++QI+ A+ F + VK+ ++ GG + +++IE G +LL+ TPGRL D++ER + N++ LVLDEADR+LDMGF+ QI +I+ Sbjct: 147 PPLDGLLLENIKLARFTKPTPVQKYSVPIVANGRDLMACAQTGSGKTGGFLFPVLSESFKTGPSPQPESQGSFYQRKAYPTAVIMAPTRELATQIFDEAKKF-TYRSWVKACVVYGGSPIGNQLREIER-GCDLLVATPGRLNDLLERGKI-SLANVKYLVLDEADRMLDMGFEPQIRHIV 324
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: RH8_ARATH (DEAD-box ATP-dependent RNA helicase 8 OS=Arabidopsis thaliana GN=RH8 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.535e-22 Identity = 61/183 (33.33%), Postives = 108/183 (59.02%), Query Frame = 3 Query: 126 LSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSS 674 L +L + E GFE +P+Q +IP+ + +D+ A G+GKT AF +P++E + + ++ I +II PTREL+ Q V + L ++ ++ GG +K D+ ++ + +LL+GTPGR+ D+ ++ V ++ +LV+DEAD+LL FQ + ++IS LP+ R+ +FS+ Sbjct: 138 LKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEKIDQDNNV-----IQAVIIVPTRELALQTSQVCKELGKHL-KIQVMVTTGGTSLKDDIMRLYQP-VHLLVGTPGRILDLTKK-GVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISFLPESRQILMFSA 312
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: RH17_ARATH (DEAD-box ATP-dependent RNA helicase 17 OS=Arabidopsis thaliana GN=RH17 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.535e-22 Identity = 65/177 (36.72%), Postives = 100/177 (56.50%), Query Frame = 3 Query: 114 LKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRAS-SARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRL 641 L LS+ + E + GFE T VQA IP++ S +DV V+A TG+GKT+A++ PL+ L+ S + H ++I PTREL Q+Y + + + ++GG E KA K +G ++LI TPGRL D ++ +NL ++ DEAD +L++G+ K+I II L Sbjct: 36 LDTKLSDQLKERM---GFEAPTLVQAQAIPVILSGRDVLVNAPTGTGKTIAYLAPLIHHLQGHSPKVDRSHGTFALVIVPTRELCLQVYETLEKLLHRFHWIVPGYVMGG-EKKAKEKARLRKGISILIATPGRLLDHLKNTASFVHKNLRWVIFDEADSILELGYGKEIEQIIKLL 208
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DDX3_DICDI (Probable ATP-dependent RNA helicase ddx3 OS=Dictyostelium discoideum GN=ddx3 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.535e-22 Identity = 74/219 (33.79%), Postives = 120/219 (54.79%), Query Frame = 3 Query: 60 VRMESNPNKALTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVE-ILRRASSARKPHQIMG---------MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP----KLRRTGLFSS 674 + +E++ + F+D+ L + +L + A + TPVQ + +P++ +D+ A TGSGKT AF+ P++ IL + P G ++++PTREL+ QI+ A F P V SV++ GG EV + ++ + G ++L+ T GRL D++ R V ++ LVLDEADR+LDMGF+ QI IIS + R+T +FS+ Sbjct: 234 ISIETSEHICAPLNSFADVD--LGDVLLGNIKHAKYTKPTPVQKSALPIILKNRDLMACAQTGSGKTAAFLFPIISGILLDGAPEAPPAYKPGVPRAACPRALVLAPTRELAQQIFDEANKFSYGSP-VSSVVIYGGAEVFHQINEL-DRGCDILVATTGRLVDLLMRGRV-SLSKIKYLVLDEADRMLDMGFEPQIRQIISEFDMPGCRDRQTLMFSA 447
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DBP7_PHANO (ATP-dependent RNA helicase DBP7 OS=Phaeosphaeria nodorum GN=DBP7 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.535e-22 Identity = 61/169 (36.09%), Postives = 99/169 (58.58%), Query Frame = 3 Query: 186 QAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQ----------IMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTG 662 +AA L+ D + A TGSGKTLA+++P+V+ L S+ K H+ + +I++PTRELS QI V + + + + ++GG + K++ ++ + G N+L+ TPGRL D +E + LD N+ LVLDE DRL+++GF+++I I+ L LR G Sbjct: 214 KAAITQLVKDDSDAFIQAETGSGKTLAYLLPIVQRLMELSANMKKHKDDDAVQRNSGLFAIIMAPTRELSKQIALVLEKLLGCAHWLVATTVIGGEKKKSEKARLRK-GINILVATPGRLADHLEHTEALDVSNVRWLVLDEGDRLMELGFEQEIQKIVGAL-NLRMRG 380
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DBP3_ASPOR (ATP-dependent RNA helicase dbp3 OS=Aspergillus oryzae GN=dbp3 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.535e-22 Identity = 68/167 (40.72%), Postives = 102/167 (61.08%), Query Frame = 3 Query: 159 AGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVP-LVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRR 656 + F+ T +Q+AT PLL + +DV A TGSGKTLAF +P L +I A + +KP++ + +IISPTREL+ QIY F ++ V+ + GGV + + ++ G +++ TPGRL D+ V D ++ LVLDEADR+LD GF++ I II +P +R Sbjct: 98 SSFKSPTSIQSATWPLLFAGRDVIGIAETGSGKTLAFGLPCLKKIQDSAMTKQKPYRPLAVIISPTRELAMQIYDQLLKFSGSV-GVRVACVFGGVRKEEQREALKTAG--VVVATPGRLKDLQNDGSV-DLGKVKYLVLDEADRMLDKGFEQDIKDIIRPMPVSKR 260
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: RH5_ARATH (DEAD-box ATP-dependent RNA helicase 5 OS=Arabidopsis thaliana GN=RH5 PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.923e-22 Identity = 70/203 (34.48%), Postives = 116/203 (57.14%), Query Frame = 3 Query: 84 KALTETRFSDLKPALSEPVLEALAEA--GFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVP-LVEILRR---ASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSS 674 K + E +++ LK + E + + FE +P+Q+ T P L +D+ A TGSGKTLAF +P ++ +L++ K +++SPTREL+ QI V + +KS+ + GG + I G +++IGTPGRL D++E +VL ++ +VLDEADR+LDMGF++ + +I+S K+R+ +FS+ Sbjct: 105 KGVEEAKYAALKTFAESNLPENVLDCCKTFEKPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAIMHVLKKNKKIGGGSKKVNPTCLVLSPTRELAVQISDVLREAGEPC-GLKSICVYGGSSKGPQISAIRS-GVDIVIGTPGRLRDLIES-NVLRLSDVSFVVLDEADRMLDMGFEEPVRFILSNTNKVRQMVMFSA 304 The following BLAST results are available for this feature:
BLAST of FC868819 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868819 ID=FC868819; Name=FC868819; organism=Citrus clementina; type=EST; length=685bpback to top |