FC868831
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868831 vs. ExPASy Swiss-Prot
Match: AMT13_SOLLC (Ammonium transporter 1 member 3 OS=Solanum lycopersicum GN=AMT1-3 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.244e-33 Identity = 75/134 (55.97%), Postives = 87/134 (64.93%), Query Frame = 2 Query: 218 AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDXXXXXXXXXXXXXXXXXXTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWXXXXXXXXXXXXXXXERTQFVAYLIYSSFLTGFVYLVVSHW 619 ++++ YLLFSAYLVF MQLGFAMLCAGSVRAKN MNIMLTNV+D SN FIG FALK P+S++DYS+FLYQW ERTQF AYL++S FLTGFVY VV+HW Sbjct: 12 SINAIYLLFSAYLVFVMQLGFAMLCAGSVRAKNAMNIMLTNVVDAVVGSLSYYLFGFAFAFGD-SNPFIGASYFALKDIPSSSYDYSFFLYQWAFAIAVAGITSGSIAERTQFTAYLVFSFFLTGFVYPVVAHW 144
BLAST of FC868831 vs. ExPASy Swiss-Prot
Match: AMT1_CAEEL (Putative ammonium transporter 1 OS=Caenorhabditis elegans GN=amt-1 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 9.271e-13 Identity = 43/136 (31.62%), Postives = 64/136 (47.06%), Query Frame = 2 Query: 221 VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDXXXXXXXXXXXXXXXXXXTPSNG---FIGRHNFALKSFPTSNFDYSYFLYQWXXXXXXXXXXXXXXXERTQFVAYLIYSSFLTGFVYLVVSHW 619 V+S +L A ++F MQ GFA L AG+VR+KNT NI++ N+LD G F+G F L F DY F +Q+ ER +F+ Y+ Y + ++ F+Y V++HW Sbjct: 29 VNSFFLCSMALIIFFMQCGFAYLEAGAVRSKNTTNILIKNLLDSCICIIGYWAIGWALAYGDSGEGVNLFVGHSQFFLSGFS----DYPRFFFQYVFSATAATIVSGAVAERCEFITYVTYCTVISTFIYPVLTHW 160
BLAST of FC868831 vs. ExPASy Swiss-Prot
Match: AMT3_DICDI (Ammonium transporter 3 OS=Dictyostelium discoideum GN=amtC PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.895e-11 Identity = 42/136 (30.88%), Postives = 66/136 (48.53%), Query Frame = 2 Query: 215 YAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDXXXXXXXXXXXXXXXXXXTPS-NGFIGRHNFALKSFPTSNFDYSYFLYQWXXXXXXXXXXXXXXXERTQFVAYLIYSSFLTGFVYLVVSHW 619 + +D++++L +A LVF MQ GF ML AG VRAKNT +I+L N+++ + N F+G NF L + Y+Y++ QW ER Q Y++++ T +Y V+HW Sbjct: 22 FYMDTSWVLDAANLVFFMQAGFGMLEAGMVRAKNTKSILLKNLINTAICAISYYCVGHSFAYGKVNPNSFVGFGNFFLMDYT----HYAYWMIQWAYAATATTIATGAMAERLQLHCYILFTLVQTILIYPFVAHW 153 The following BLAST results are available for this feature:
BLAST of FC868831 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868831 ID=FC868831; Name=FC868831; organism=Citrus clementina; type=EST; length=619bpback to top |