FC868845

Overview
NameFC868845
Unique NameFC868845
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868845 vs. ExPASy Swiss-Prot
Match: XTHB_PHAAN (Probable xyloglucan endotransglucosylase/hydrolase protein B OS=Phaseolus angularis GN=XTHB PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.419e-34
Identity = 76/178 (42.70%), Postives = 107/178 (60.11%), Query Frame = 2
Query:  149 VPFDEGYSHLFGHDNLVVHRDGKSVHLSLDE-TGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFP-AKPMSLYATIWDGSDWAT 676
            VPF   Y   +  D++     G  + L LD+ TG+GF +   YL G FS +IK+    +AG V AF +S+ +     HDEIDFEFLGN  G+ + +QTN++  G     RE+R  LWFDP+  +H+YS+LW   QI+F +D IPIR FK    +G  FP  +PM +Y ++W+  DWAT
Sbjct:   30 VPFGRNYIPTWAFDHIKYFNGGSEIQLHLDKYTGTGFQTKGSYLFGHFSMNIKMVPGDSAGTVTAFCLSSQNA---EHDEIDFEFLGNRTGQPYILQTNVFTGGKGD--REQRIYLWFDPTKAYHRYSVLWNMYQIVFLVDNIPIRVFKNLKELGVKFPFNQPMKVYNSLWNADDWAT 202          
BLAST of FC868845 vs. ExPASy Swiss-Prot
Match: XTH1_SOLLC (Probable xyloglucan endotransglucosylase/hydrolase 1 OS=Solanum lycopersicum GN=XTH1 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.853e-34
Identity = 76/185 (41.08%), Postives = 111/185 (60.00%), Query Frame = 2
Query:  131 YRNLPI-VPFDEGYSHLFGHDNLVVHRDGKSVHLSLDET-GSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFP-AKPMSLYATIWDGSDWAT 676
            Y   P+ VPF + Y   +   ++     G +  L LD + G+GF S   YL G FS  ++L    +AGVV AFY+S+ +     HDEIDFEFLGN  G+ + +QTN++  G  +  RE+R  LWFDP+  +H YS+LW    I+ ++D +PIR FK +  +G  FP  +PM +Y+++WD  DWAT
Sbjct:   24 YPRRPVDVPFWKNYEPSWASHHIKFLNGGTTTDLILDRSSGAGFQSKKSYLFGHFSMKMRLVGGDSAGVVTAFYLSSNNA---EHDEIDFEFLGNRTGQPYILQTNVFTGGKGN--REQRIYLWFDPTKGYHSYSVLWNTYLIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWAT 203          
BLAST of FC868845 vs. ExPASy Swiss-Prot
Match: XTH18_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 18 OS=Arabidopsis thaliana GN=XTH18 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.853e-34
Identity = 75/159 (47.17%), Postives = 103/159 (64.78%), Query Frame = 2
Query:  206 RDGKSVHLSLDET-GSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAK-PMSLYATIWDGSDWAT 676
            RDGK + LSLD++ GSGF S+  +L+G     +KL    +AG V  FY+ +        DEIDFEFLGN+ G  + + TN+Y  GS    +E++++LWFDP+ +FH Y I W   +IIF +DGIPIREFK + S+G  FP K PM LYA++W+   WAT
Sbjct:   47 RDGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKSPGT---TWDEIDFEFLGNLSGHPYTLHTNVYTKGSGD--KEQQFHLWFDPTVNFHTYCITWNPQRIIFTVDGIPIREFKNSESIGVPFPTKQPMRLYASLWEAEHWAT 200          
BLAST of FC868845 vs. ExPASy Swiss-Prot
Match: XTH20_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 20 OS=Arabidopsis thaliana GN=XTH20 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.569e-33
Identity = 72/157 (45.86%), Postives = 101/157 (64.33%), Query Frame = 2
Query:  212 GKSVHLSLDE-TGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPA-KPMSLYATIWDGSDWAT 676
            G  + LSLD+ +GSGF SH  +L+G     +KL    +AG V  FY+ +        DEIDFEFLGNI G  + + TN+Y  G+    +E++++LWFDP+ DFH Y I+W   ++IF IDGIPIREFK + ++G  FP  +PM LYA++W+   WAT
Sbjct:   49 GNLLSLSLDKFSGSGFQSHQEFLYGKVEVQMKLVPGNSAGTVTTFYLKSPGT---TWDEIDFEFLGNISGHPYTLHTNVYTKGTGD--KEQQFHLWFDPTVDFHTYCIIWNPQRVIFTIDGIPIREFKNSEALGVPFPKHQPMRLYASLWEAEHWAT 200          
BLAST of FC868845 vs. ExPASy Swiss-Prot
Match: XTH16_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 16 OS=Arabidopsis thaliana GN=XTH16 PE=2 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 1.569e-33
Identity = 73/176 (41.48%), Postives = 105/176 (59.66%), Query Frame = 2
Query:  155 FDEGYSHLFGHDNLVVHRDGKSVHLSLDE-TGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPA-KPMSLYATIWDGSDWAT 676
            F+E +   +G     +   GK + LSLD  +GSGF S   YL G     +KL A  +AG V A+Y+S+       HDEIDFEFLGN  GK + + TN++  G  +  RE+++ LWFDP+ +FH YS++W    IIF +D +PIR F     +G  FP  +PM +Y+++W+  DWAT
Sbjct:   27 FNEEFDLTWGEHRGKIFSGGKMLSLSLDRVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSEG---PTHDEIDFEFLGNETGKPYVLHTNVFAQGKGN--REQQFYLWFDPTKNFHTYSLVWRPQHIIFMVDNVPIRVFNNAEQLGVPFPKNQPMKIYSSLWNADDWAT 197          
BLAST of FC868845 vs. ExPASy Swiss-Prot
Match: XTH7_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 7 OS=Arabidopsis thaliana GN=XTH7 PE=2 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 2.049e-33
Identity = 71/176 (40.34%), Postives = 107/176 (60.80%), Query Frame = 2
Query:  155 FDEGYSHLFGHDNLVVHRDGKSVHLSLD-ETGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPA-KPMSLYATIWDGSDWAT 676
            F++ +   +   ++     G+++ L LD  +G GF S   YL G  S  IKL    +AG V AFYM++    +   DE+DFEFLGN  G+ + +QTN++ +G     RE+R NLWFDPS DFH+Y+I W   +I+FY+D +PIR +K   +    +P  +PM +Y+T+W+  DWAT
Sbjct:   34 FEDDFRIAWSDTHITQIDGGRAIQLKLDPSSGCGFASKKQYLFGRVSMKIKLIPGDSAGTVTAFYMNSDT--DSVRDELDFEFLGNRSGQPYTVQTNVFAHGKGD--REQRVNLWFDPSRDFHEYAISWNHLRIVFYVDNVPIRVYKNNEARKVPYPRFQPMGVYSTLWEADDWAT 205          
BLAST of FC868845 vs. ExPASy Swiss-Prot
Match: XTH17_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 17 OS=Arabidopsis thaliana GN=XTH17 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.049e-33
Identity = 73/159 (45.91%), Postives = 102/159 (64.15%), Query Frame = 2
Query:  206 RDGKSVHLSLDET-GSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAK-PMSLYATIWDGSDWAT 676
            RDGK + LSLD++ GSGF S+  +L+G     +KL    +AG V  FY+ +        DEIDFEFLGNI G  + + TN+Y  G+    +E++++LWFDP+ +FH Y I W   +IIF +DGIPIREFK   ++G  FP + PM LYA++W+   WAT
Sbjct:   47 RDGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKSPGT---TWDEIDFEFLGNISGHPYTLHTNVYTKGTGD--KEQQFHLWFDPTVNFHTYCITWNPQRIIFTVDGIPIREFKNPEAIGVPFPTRQPMRLYASLWEAEHWAT 200          
BLAST of FC868845 vs. ExPASy Swiss-Prot
Match: XTH10_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 10 OS=Arabidopsis thaliana GN=XTH10 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.049e-33
Identity = 75/158 (47.47%), Postives = 101/158 (63.92%), Query Frame = 2
Query:  209 DGKSVHLSLD-ETGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFP-AKPMSLYATIWDGSDWAT 676
            DG+S  L LD E+G+ F S   +L G     IKL    + G VVA+YMS+    + N DEIDFEFLGN+ G+ + +QTN+Y  G  +  REER +LWFDP+ DFH YSILW   QI+F +D IPIR ++     G  +P  +PMS+ A++W+G  WAT
Sbjct:   55 DGRSRTLKLDQESGASFSSIQTFLFGQIDMKIKLIRGSSQGTVVAYYMSSD---QPNRDEIDFEFLGNVNGQPYILQTNVYAEGLDN--REERIHLWFDPAKDFHTYSILWNIHQIVFMVDQIPIRLYRNHGEKGVAYPRLQPMSVQASLWNGESWAT 207          
BLAST of FC868845 vs. ExPASy Swiss-Prot
Match: BRU1_SOYBN (Brassinosteroid-regulated protein BRU1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.676e-33
Identity = 74/176 (42.05%), Postives = 106/176 (60.23%), Query Frame = 2
Query:  155 FDEGYSHLFGHDNLVVHRDGKSVHLSLDE-TGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPA-KPMSLYATIWDGSDWAT 676
            F + +   +G D   +   G+ + LSLD+ +GSGF S   YL G     +KL A  +AG V A+Y+S+       HDEIDFEFLGN+ G  + + TNI+  G  +  RE+++ LWFDP+ +FH YSI+W    IIF +D  PIR FK    +G  FP  +PM +Y+++W+  DWAT
Sbjct:   32 FYQDFDLTWGGDRAKIFNGGQLLSLSLDKVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQG---PTHDEIDFEFLGNLSGDPYILHTNIFTQGKGN--REQQFYLWFDPTRNFHTYSIIWKPQHIIFLVDNTPIRVFKNAEPLGVPFPKNQPMRIYSSLWNADDWAT 202          
BLAST of FC868845 vs. ExPASy Swiss-Prot
Match: XTH23_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis thaliana GN=XTH23 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.495e-33
Identity = 73/161 (45.34%), Postives = 101/161 (62.73%), Query Frame = 2
Query:  200 VHRDGKSVHLSLDE-TGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPA-KPMSLYATIWDGSDWAT 676
            +  +G  + LSLD+ +GSGF S + YL G     IKL A  +AG V A+Y+ +        DEIDFEFLGN+ G  + + TN++  G     RE+++ LWFDP+ DFH YSILW   +IIF +DG PIREFK   S G  FP  +PM +Y+++W+  +WAT
Sbjct:   41 ITNNGDLLTLSLDKASGSGFQSKNEYLFGKIDMQIKLVAGNSAGTVTAYYLKSPG---STWDEIDFEFLGNLSGDPYTLHTNVFTQGKGD--REQQFKLWFDPTSDFHTYSILWNPQRIIFSVDGTPIREFKNMESQGTLFPKNQPMRMYSSLWNAEEWAT 196          
The following BLAST results are available for this feature:
BLAST of FC868845 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
XTHB_PHAAN1.419e-3442.70Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH1_SOLLC1.853e-3441.08Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH18_ARATH1.853e-3447.17Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH20_ARATH1.569e-3345.86Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH16_ARATH1.569e-3341.48Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH7_ARATH2.049e-3340.34Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH17_ARATH2.049e-3345.91Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH10_ARATH2.049e-3347.47Probable xyloglucan endotransglucosylase/hydrolase... [more]
BRU1_SOYBN2.676e-3342.05Brassinosteroid-regulated protein BRU1 OS=Glycine ... [more]
XTH23_ARATH3.495e-3345.34Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionC31005E08EF AbioticL1 Citrus clementina cDNA clone C31005E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868845 ID=FC868845; Name=FC868845; organism=Citrus clementina; type=EST; length=698bp
GCACATATATATATAAACATACACTCACAGAGACAGAGCAAAAACAGAGA
GAGAAGAAAAGATGGTGGTGTCTTATGAGGGTTGTTTTCTTCTAGTATTT
TCTCTTCTTGCTGTGGTTGCTTCTGGGTTGTACAGAAACCTGCCTATTGT
GCCTTTTGATGAAGGGTATAGTCATTTGTTTGGGCATGATAATCTTGTTG
TTCATAGAGATGGAAAATCTGTTCATTTATCTCTAGATGAAACAGGGTCT
GGATTTGTGTCACATGACCTCTATCTTCATGGTTTCTTCAGTGCTTCAAT
AAAGTTGCCTGCTGATTATACTGCCGGCGTTGTTGTTGCCTTCTATATGT
CAAATGGTGACATGTTTGAGAAGAATCATGATGAAATAGACTTTGAGTTC
TTGGGTAATATTAGAGGCAAAAATTGGAGGATTCAGACTAATATTTATGG
CAATGGAAGCACCAGCATTGGAAGAGAAGAGAGATACAATCTCTGGTTTG
ATCCTTCTGATGATTTCCATCAGTACAGTATTCTCTGGACTGATTCCCAG
ATCATATTTTATATAGACGGTATTCCAATTAGGGAGTTTAAGAGAACTGC
ATCTATGGGAGGAGATTTTCCTGCTAAGCCGATGTCTTTGTACGCCACAA
TCTGGGATGGCTCTGATTGGGCTACAATGGTGGNCAATACCGAGTGAA
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