FC868846

Overview
NameFC868846
Unique NameFC868846
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868846 vs. ExPASy Swiss-Prot
Match: CHS1_CAMSI (Chalcone synthase 1 OS=Camellia sinensis GN=CHS1 PE=2 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 1.399e-82
Identity = 148/207 (71.50%), Postives = 172/207 (83.09%), Query Frame = 3
Query:   78 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENKQGSRVLVVCSENTIPTFRGPSYTHID 698
            MVT+E+IR+AQRAEG AT++AI TATPPNCV Q+ YPDYYF ITNSEH              SMI+KR+M LTEEILK NP +C +M  SLDARQD+ +VEVPKLGKEAATKAIKEWGQPKS ITHL+FCT++GVDMPGADYQLT+L+GL P VKR+M+YQQGC+AG T+LRLAKDLAEN +G+RVLVVCSE T  TFRGPS TH+D
Sbjct:    1 MVTVEDIRRAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHKAELKEKFKRMCDKSMIKKRYMYLTEEILKENPQVCEYMAPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLD 207          
BLAST of FC868846 vs. ExPASy Swiss-Prot
Match: CHSY_HYPAN (Chalcone synthase OS=Hypericum androsaemum PE=1 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 1.827e-82
Identity = 147/207 (71.01%), Postives = 169/207 (81.64%), Query Frame = 3
Query:   78 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENKQGSRVLVVCSENTIPTFRGPSYTHID 698
            MVT+EE+RKAQRAEG AT++AI TA PPNCV QA YPDYYF ITNSEH              S I+KR+M L EE+LK NPNMC +M  SLDARQDI +VEVPKLGKEAA KAIKEWGQPKS ITHL+FCT++GVDMPGADYQLT+L+GL P VKR+M+YQQGC+AG T+LRLAKDLAEN +G+RVLVVCSE T  TFRGP+ TH+D
Sbjct:    1 MVTVEEVRKAQRAEGPATVMAIGTAVPPNCVDQATYPDYYFRITNSEHKAELKEKFQRMCDKSQIKKRYMYLNEEVLKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPTDTHLD 207          
BLAST of FC868846 vs. ExPASy Swiss-Prot
Match: CHS5_SOYBN (Chalcone synthase 5 OS=Glycine max GN=CHS5 PE=3 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 1.827e-82
Identity = 148/207 (71.50%), Postives = 173/207 (83.57%), Query Frame = 3
Query:   78 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENKQGSRVLVVCSENTIPTFRGPSYTHID 698
            MV++EEIR+AQRAEG AT++AI TATPPNCV Q+ YPDYYF ITNSEHMT            SMI+KR+M L EEILK NP++C +M  SLDARQD+ ++EVPKLGKEAATKAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAEN +G+RVLVVCSE T  TFRGP+ TH+D
Sbjct:    1 MVSVEEIRQAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMYLNEEILKENPSVCAYMAPSLDARQDMVVMEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPTDTHLD 207          
BLAST of FC868846 vs. ExPASy Swiss-Prot
Match: CHS3_RUTGR (Chalcone synthase 3 OS=Ruta graveolens GN=CHS3 PE=2 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 1.827e-82
Identity = 152/206 (73.79%), Postives = 168/206 (81.55%), Query Frame = 3
Query:   81 VTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENKQGSRVLVVCSENTIPTFRGPSYTHID 698
            VT+EEIRKAQRA+G AT+LAI TATP N V QADYPDYYF IT SEHMT            SMIRKR+M LTEEILK NPNMC +M  SLDARQDI +VEVPKLGKEAA KAIKEWGQPKS ITHLIFCT++GVDMPG DYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAEN +G+RVLVVCSE T  TFRGP  TH+D
Sbjct:    4 VTVEEIRKAQRADGPATVLAIGTATPANYVTQADYPDYYFRITKSEHMTDLKEKFKRMCDKSMIRKRYMHLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAAKAIKEWGQPKSKITHLIFCTTSGVDMPGCDYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPVDTHLD 209          
BLAST of FC868846 vs. ExPASy Swiss-Prot
Match: CHSY_PHAVU (Chalcone synthase 17 OS=Phaseolus vulgaris GN=CHS17 PE=2 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 2.387e-82
Identity = 152/207 (73.43%), Postives = 170/207 (82.13%), Query Frame = 3
Query:   78 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENKQGSRVLVVCSENTIPTFRGPSYTHID 698
            MV++ EIR+AQRAEG ATILAI TATP NCV Q+ YPDYYF ITNSEHMT            SMI+KR+M L EEILK NPNMC +M  SLDARQDI +VEVPKLGKEAA KAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAEN +G+RVLVVCSE T  TFRGPS TH+D
Sbjct:    1 MVSVSEIRQAQRAEGPATILAIGTATPSNCVDQSTYPDYYFRITNSEHMTDLKEKFQRMCDKSMIKKRYMHLNEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLD 207          
BLAST of FC868846 vs. ExPASy Swiss-Prot
Match: CHS2_CITSI (Chalcone synthase 2 OS=Citrus sinensis GN=CHS2 PE=2 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 2.387e-82
Identity = 151/207 (72.95%), Postives = 170/207 (82.13%), Query Frame = 3
Query:   78 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENKQGSRVLVVCSENTIPTFRGPSYTHID 698
            M T++EIR AQRA+G AT+LAI TATP + V QADYPDYYF IT SEHMT            SMI+KR+M LTEEILK NPNMC +M  SLDARQDI +VEVPKLGKEAATKAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+LIGL P VKR M+YQQGC+AG T+LRLAKDLAEN +G+RVLVVCSE T  TFRGP+ TH+D
Sbjct:    1 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLD 207          
BLAST of FC868846 vs. ExPASy Swiss-Prot
Match: CHS6_SOYBN (Chalcone synthase 6 OS=Glycine max GN=CHS6 PE=3 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 3.117e-82
Identity = 149/207 (71.98%), Postives = 171/207 (82.61%), Query Frame = 3
Query:   78 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENKQGSRVLVVCSENTIPTFRGPSYTHID 698
            MV++EEIRKAQRAEG AT++AI TATPPNCV Q+ YPDYYF ITNS+HM             SMI+KR+M L EEILK NP++C +M  SLDARQD+ +VEVPKLGKEAATKAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAEN  G+RVLVVCSE T  TFRGPS TH+D
Sbjct:    1 MVSVEEIRKAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSDHMNELKEKFKRMCDKSMIKKRYMYLNEEILKENPSVCAYMEPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVLRLAKDLAENNTGARVLVVCSEITAVTFRGPSDTHLD 207          
BLAST of FC868846 vs. ExPASy Swiss-Prot
Match: CHS6_IPOBA (Chalcone synthase DII OS=Ipomoea batatas GN=CHS-DII PE=2 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 3.117e-82
Identity = 148/207 (71.50%), Postives = 171/207 (82.61%), Query Frame = 3
Query:   78 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENKQGSRVLVVCSENTIPTFRGPSYTHID 698
            MVT+EE+RKAQRAEG ATILAI TATP NCV Q+ YPDYYF ITNSEH T            SMI KR+M LTEEILK NP+ C +M  SLDARQDI++VEVPKLGKEAA  AIKEWGQPKS ITH++FCT++GVDMPGADYQLT+L+GL P VKR+M+YQQGC+AG T+LRLAKDLAEN +G+RVL+VCSE T+ TFRGPS TH+D
Sbjct:    1 MVTVEEVRKAQRAEGPATILAIGTATPANCVNQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMITKRYMHLTEEILKENPSFCEYMAPSLDARQDIAVVEVPKLGKEAAQSAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLIVCSEITVVTFRGPSETHLD 207          
BLAST of FC868846 vs. ExPASy Swiss-Prot
Match: CHS2_SOLLC (Chalcone synthase 2 OS=Solanum lycopersicum GN=CHS2 PE=2 SV=2)

HSP 1 Score: 304.679 bits (779), Expect = 3.117e-82
Identity = 148/207 (71.50%), Postives = 172/207 (83.09%), Query Frame = 3
Query:   78 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENKQGSRVLVVCSENTIPTFRGPSYTHID 698
            MVT+EE+R+AQRA+G ATI+AI TATP NCV Q+ YPDYYF ITNSEHMT            SMI KR+M LTEEILK NPN+C +M  SLDARQDI +VEVPKLGKEAA KAIKEWGQPKS ITH++FCT++GVDMPGADYQLT+L+GL P VKR+M+YQQGC+AG T++RLAKDLAEN +G+RVLVVCSE T  TFRGPS TH+D
Sbjct:    1 MVTVEEVRRAQRAKGPATIMAIGTATPSNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMINKRYMHLTEEILKENPNICEYMAPSLDARQDIVVVEVPKLGKEAAQKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVIRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLD 207          
BLAST of FC868846 vs. ExPASy Swiss-Prot
Match: CHSY_BETVE (Chalcone synthase OS=Betula verrucosa GN=CHS PE=2 SV=2)

HSP 1 Score: 303.908 bits (777), Expect = 5.317e-82
Identity = 147/207 (71.01%), Postives = 169/207 (81.64%), Query Frame = 3
Query:   78 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENKQGSRVLVVCSENTIPTFRGPSYTHID 698
            M ++EEIRKAQRA G AT+LAI TATP NC+ QADYPDYYF IT S+HMT            SMI+KR+M L EEIL  NPNMC +M  SLDARQ I +VEVPKLGKEAATKAIKEWGQPKS ITHL+FCT++GVDMPGADYQLT+L+GL P VKR+M+YQQGC+AG T+LRLAKDLAEN +G+RVLVVCSE T  TFRGP+ TH+D
Sbjct:    1 MASVEEIRKAQRAHGPATVLAIGTATPSNCITQADYPDYYFRITKSDHMTELKEKFKRMCDKSMIKKRYMYLNEEILNENPNMCAYMAPSLDARQTIVVVEVPKLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPTDTHLD 207          
The following BLAST results are available for this feature:
BLAST of FC868846 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHS1_CAMSI1.399e-8271.50Chalcone synthase 1 OS=Camellia sinensis GN=CHS1 P... [more]
CHSY_HYPAN1.827e-8271.01Chalcone synthase OS=Hypericum androsaemum PE=1 SV... [more]
CHS5_SOYBN1.827e-8271.50Chalcone synthase 5 OS=Glycine max GN=CHS5 PE=3 SV... [more]
CHS3_RUTGR1.827e-8273.79Chalcone synthase 3 OS=Ruta graveolens GN=CHS3 PE=... [more]
CHSY_PHAVU2.387e-8273.43Chalcone synthase 17 OS=Phaseolus vulgaris GN=CHS1... [more]
CHS2_CITSI2.387e-8272.95Chalcone synthase 2 OS=Citrus sinensis GN=CHS2 PE=... [more]
CHS6_SOYBN3.117e-8271.98Chalcone synthase 6 OS=Glycine max GN=CHS6 PE=3 SV... [more]
CHS6_IPOBA3.117e-8271.50Chalcone synthase DII OS=Ipomoea batatas GN=CHS-DI... [more]
CHS2_SOLLC3.117e-8271.50Chalcone synthase 2 OS=Solanum lycopersicum GN=CHS... [more]
CHSY_BETVE5.317e-8271.01Chalcone synthase OS=Betula verrucosa GN=CHS PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionC31005E09EF AbioticL1 Citrus clementina cDNA clone C31005E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868846 ID=FC868846; Name=FC868846; organism=Citrus clementina; type=EST; length=700bp
AGACACAATCGCGAAAGCGCATACTTATTAATTAACTAAGTTTAAGTACT
GTTTTGGAAGCAATCTGACGATCAGAGATGGTAACAATGGAGGAGATTAG
AAAGGCTCAGCGAGCCGAGGGCCTGGCGACCATCCTCGCCATCAGCACGG
CAACGCCGCCCAATTGTGTCATCCAAGCTGATTATCCTGACTATTACTTC
GGGATCACCAACAGCGAGCACATGACTGAGCTCAAAGAGAAGTTCAAGCT
CTTGTGTGAGAAGTCGATGATAAGAAAGCGTCACATGTGCTTAACAGAAG
AGATTTTAAAAGCAAACCCTAATATGTGCTTACACATGGGGACATCACTC
GATGCGCGCCAGGACATTTCTCTTGTTGAAGTACCAAAGCTTGGCAAAGA
GGCGGCAACCAAAGCTATCAAAGAATGGGGACAGCCCAAATCCAATATCA
CCCATCTCATTTTCTGCACATCTGCAGGCGTCGACATGCCTGGCGCTGAC
TATCAGCTCACAAGACTCATCGGCCTCAACCCGGATGTTAAGCGTATGAT
GATATATCAACAAGGGTGTTATGCTGGCGCCACCATCCTTCGTCTTGCTA
AAGATTTGGCTGAAAACAAACAGGGCTCTCGTGTTCTTGTTGTTTGTTCT
GAGAACACAATCCCCACTTTCCGTGGGCCGTCTTATACCCATATTGATTC
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