FC868896
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868896 vs. ExPASy Swiss-Prot
Match: CYSKP_CAPAN (Cysteine synthase, chloroplastic/chromoplastic OS=Capsicum annuum PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.970e-21 Identity = 47/63 (74.60%), Postives = 56/63 (88.89%), Query Frame = 1 Query: 109 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGK 297 I +DVT+LIG+TPMVYLN +V GCVA IAAKLE+M+PC SVKDRI +SMI DAE+KGLI+PGK Sbjct: 67 IAEDVTQLIGNTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMISDAEEKGLISPGK 129 HSP 2 Score: 72.4034 bits (176), Expect = 2.451e-12 Identity = 35/45 (77.78%), Postives = 41/45 (91.11%), Query Frame = 3 Query: 543 KTVLIEITSGNTGIGLAFIAASRGYKLIIIMPXTYSIERRIILRA 677 KTVL+E TSGNTGIGLAFIAASRGYKLI+ MP + S+ERR+IL+A Sbjct: 129 KTVLVEPTSGNTGIGLAFIAASRGYKLILTMPASMSLERRVILKA 173
BLAST of FC868896 vs. ExPASy Swiss-Prot
Match: CYSKP_SOLTU (Cysteine synthase, chloroplastic/chromoplastic OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.107e-20 Identity = 48/72 (66.67%), Postives = 59/72 (81.94%), Query Frame = 1 Query: 82 SSSMEDKCEIKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGK 297 SS+ + I +DVT+LIG+TPMVYLN + GCVA IAAKLE+M+PC SVKDRI +SMI DAE+KGLI+PGK Sbjct: 60 SSTEIEGLNIAEDVTQLIGNTPMVYLNTIAKGCVANIAAKLEIMEPCCSVKDRIGFSMIVDAEEKGLISPGK 131 HSP 2 Score: 72.4034 bits (176), Expect = 2.451e-12 Identity = 35/45 (77.78%), Postives = 41/45 (91.11%), Query Frame = 3 Query: 543 KTVLIEITSGNTGIGLAFIAASRGYKLIIIMPXTYSIERRIILRA 677 KTVL+E TSGNTGIGLAFIAASRGYKLI+ MP + S+ERR+IL+A Sbjct: 131 KTVLVEPTSGNTGIGLAFIAASRGYKLILTMPASMSLERRVILKA 175
BLAST of FC868896 vs. ExPASy Swiss-Prot
Match: CYSKP_ARATH (Cysteine synthase, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=OASB PE=1 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 2.467e-20 Identity = 47/63 (74.60%), Postives = 53/63 (84.13%), Query Frame = 1 Query: 109 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGK 297 I + +LIG TPMVYLNNVV GCVA +AAKLE+M+PC SVKDRI YSMI DAE+KGLITPGK Sbjct: 75 IADNAAQLIGKTPMVYLNNVVKGCVASVAAKLEIMEPCCSVKDRIGYSMITDAEEKGLITPGK 137 HSP 2 Score: 70.4774 bits (171), Expect = 9.312e-12 Identity = 33/45 (73.33%), Postives = 41/45 (91.11%), Query Frame = 3 Query: 543 KTVLIEITSGNTGIGLAFIAASRGYKLIIIMPXTYSIERRIILRA 677 K+VL+E TSGNTGIGLAFIAAS+GYKLI+ MP + S+ERR++LRA Sbjct: 137 KSVLVESTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLRA 181
BLAST of FC868896 vs. ExPASy Swiss-Prot
Match: CYSKP_SPIOL (Cysteine synthase, chloroplastic/chromoplastic OS=Spinacia oleracea GN=CYSK PE=1 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 2.727e-19 Identity = 47/63 (74.60%), Postives = 52/63 (82.54%), Query Frame = 1 Query: 109 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGK 297 I +DV++LIG TPMVYLNNV G VA IAAKLE M+PC SVKDRI YSMI DAE KG+ITPGK Sbjct: 67 IAEDVSQLIGKTPMVYLNNVSKGSVANIAAKLESMEPCCSVKDRIGYSMIDDAEQKGVITPGK 129
BLAST of FC868896 vs. ExPASy Swiss-Prot
Match: CYSKM_ARATH (Cysteine synthase, mitochondrial OS=Arabidopsis thaliana GN=OASC PE=1 SV=3) HSP 1 Score: 94.7449 bits (234), Expect = 4.652e-19 Identity = 44/67 (65.67%), Postives = 53/67 (79.10%), Query Frame = 1 Query: 97 DKCEIKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGK 297 D I +V++LIG TPMVYLN++ GCVA IAAKLE+M+PC SVKDRI YSM+ DAE KG I+PGK Sbjct: 109 DGLNIADNVSQLIGKTPMVYLNSIAKGCVANIAAKLEIMEPCCSVKDRIGYSMVTDAEQKGFISPGK 175 HSP 2 Score: 68.5514 bits (166), Expect = 3.539e-11 Identity = 32/45 (71.11%), Postives = 41/45 (91.11%), Query Frame = 3 Query: 543 KTVLIEITSGNTGIGLAFIAASRGYKLIIIMPXTYSIERRIILRA 677 K+VL+E TSGNTGIGLAFIAASRGY+LI+ MP + S+ERR++L+A Sbjct: 175 KSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKA 219
BLAST of FC868896 vs. ExPASy Swiss-Prot
Match: CYSK4_ARATH (Probable cysteine synthase, chloroplastic OS=Arabidopsis thaliana GN=At3g03630 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 8.773e-18 Identity = 44/63 (69.84%), Postives = 50/63 (79.37%), Query Frame = 1 Query: 109 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGK 297 I +DVT+LIG TPMVYLN V DGC+A IAAKLE M+PC SVKDRI SMI +AE+ G ITP K Sbjct: 99 IAEDVTQLIGSTPMVYLNRVTDGCLADIAAKLESMEPCRSVKDRIGLSMINEAENSGAITPRK 161
BLAST of FC868896 vs. ExPASy Swiss-Prot
Match: CYSK_SYNY3 (Cysteine synthase OS=Synechocystis sp. (strain PCC 6803) GN=cysK PE=3 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 5.508e-12 Identity = 36/66 (54.55%), Postives = 47/66 (71.21%), Query Frame = 1 Query: 106 EIKKDVTELIGHTPMVYLNNV--VDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGK 297 +I ++TELIG TP+V LN + ++GC A+I KLE M P +SVKDRI +MI AE +GLI PGK Sbjct: 2 KIASNITELIGRTPLVRLNRIPLLEGCGAKIVVKLEGMNPAASVKDRIGINMINRAEQEGLIEPGK 67
BLAST of FC868896 vs. ExPASy Swiss-Prot
Match: CYSK_MYCTU (Cysteine synthase A OS=Mycobacterium tuberculosis GN=cysK PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.227e-11 Identity = 37/75 (49.33%), Postives = 48/75 (64.00%), Query Frame = 1 Query: 109 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKVF----NGNSPI 321 I +D+T+LIG TP+V L V DG VA I AKLE P +SVKDRI +M++ AE GLI P + +GN+ I Sbjct: 3 IAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLIKPDTIILEPTSGNTGI 77
BLAST of FC868896 vs. ExPASy Swiss-Prot
Match: CYSK_MYCBO (Cysteine synthase A OS=Mycobacterium bovis GN=cysK PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.227e-11 Identity = 37/75 (49.33%), Postives = 48/75 (64.00%), Query Frame = 1 Query: 109 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKVF----NGNSPI 321 I +D+T+LIG TP+V L V DG VA I AKLE P +SVKDRI +M++ AE GLI P + +GN+ I Sbjct: 3 IAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLIKPDTIILEPTSGNTGI 77
BLAST of FC868896 vs. ExPASy Swiss-Prot
Match: CYSK_MYCLE (Cysteine synthase A OS=Mycobacterium leprae GN=cysK PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.570e-11 Identity = 36/75 (48.00%), Postives = 49/75 (65.33%), Query Frame = 1 Query: 109 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKVF----NGNSPI 321 I +DVT+L+G+TP+V L V +G +A + AKLE P +SVKDRI +MI AE+ GLI P V +GN+ I Sbjct: 3 IAEDVTQLVGNTPLVRLRRVTEGALADVVAKLESFNPANSVKDRIGVAMIDTAEEAGLIKPDTVILEPTSGNTGI 77 The following BLAST results are available for this feature:
BLAST of FC868896 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868896 ID=FC868896; Name=FC868896; organism=Citrus clementina; type=EST; length=679bpback to top |