FC868909
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868909 vs. ExPASy Swiss-Prot
Match: Y2748_LISMF (UPF0189 protein LMOf2365_2748 OS=Listeria monocytogenes serotype 4b (strain F2365) GN=LMOf2365_2748 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.738e-25 Identity = 68/145 (46.90%), Postives = 90/145 (62.07%), Query Frame = 1 Query: 262 LVIKKGDITKWSVDGSSDAIVNPANERMLGGGGADGAIHRAAGPELREACCKVPEVRPEVRCPIGEARITPGFKLPASHVIHTVGPIYDADSNPEAS-LRNAYKNSLSVAKENNIQYIAFTAISCGVYGYPYEEAAAVALSTVQE 693 + + KGDIT+ VD IVN AN +LGGGG DGAIH+AAGP+L + C +V + CP GEA IT L AS++IH VGPI+ + EA+ L + Y +L +A + IAF IS GVYG+P + AA VAL TV++ Sbjct: 3 ITVVKGDITEQDVD----VIVNAANPGLLGGGGVDGAIHQAAGPDLLKECQEV--INRIGTCPAGEAVITSAGDLQASYIIHAVGPIWKDGEHQEANKLASCYWKALDLAAGKELTSIAFPNISTGVYGFPKKLAAEVALYTVRK 141
BLAST of FC868909 vs. ExPASy Swiss-Prot
Match: Y2902_LISIN (UPF0189 protein lin2902 OS=Listeria innocua GN=lin2902 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.840e-24 Identity = 67/145 (46.21%), Postives = 90/145 (62.07%), Query Frame = 1 Query: 262 LVIKKGDITKWSVDGSSDAIVNPANERMLGGGGADGAIHRAAGPELREACCKVPEVRPEVRCPIGEARITPGFKLPASHVIHTVGPIYDADSNPEAS-LRNAYKNSLSVAKENNIQYIAFTAISCGVYGYPYEEAAAVALSTVQE 693 + + KGDIT+ +VD IVN AN +LGGGG DGAIH+AAGP+L + C +V + CP GEA IT L A +IH VGPI+ + EA+ L + Y +L +A ++ IAF IS GVYG+P + AA VAL TV++ Sbjct: 3 ITVVKGDITEQNVD----VIVNAANPGLLGGGGVDGAIHQAAGPDLLKECQEV--INRIGSCPAGEAVITSAGDLKAHFIIHAVGPIWKDGEHQEANKLASCYWKALDLAAGKDLTSIAFPNISTGVYGFPKKLAAEVALYTVRK 141
BLAST of FC868909 vs. ExPASy Swiss-Prot
Match: Y995_THETN (UPF0189 protein TTE0995 OS=Thermoanaerobacter tengcongensis GN=TTE0995 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.016e-24 Identity = 65/141 (46.10%), Postives = 84/141 (59.57%), Query Frame = 1 Query: 274 KGDITKWSVDGSSDAIVNPANERMLGGGGADGAIHRAAGPELREACCKVPEVRPEVRCPIGEARITPGFKLPASHVIHTVGPIY-DADSNPEASLRNAYKNSLSVAKENNIQYIAFTAISCGVYGYPYEEAAAVALSTVQE 693 KG+I VD DAIVN AN ++GGGG DGAIH+A GP + E + E + CP G A IT L A +VIH VGPI+ + N + L +AY SL +A E N++ IAF +IS G YG+P E AA +AL V + Sbjct: 9 KGNI----VDQEVDAIVNAANSSLIGGGGVDGAIHKAGGPAIAEELKVIRE--KQGGCPTGHAVITGAGNLKAKYVIHAVGPIWKGGNHNEDNLLASAYIESLKLADEYNVKTIAFPSISTGAYGFPVERAARIALRVVSD 143
BLAST of FC868909 vs. ExPASy Swiss-Prot
Match: Y6450_STRCO (UPF0189 protein SCO6450 OS=Streptomyces coelicolor GN=SCO6450 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.242e-23 Identity = 60/142 (42.25%), Postives = 81/142 (57.04%), Query Frame = 1 Query: 262 LVIKKGDITKWSVDGSSDAIVNPANERMLGGGGADGAIHRAAGPELREACCKVPEVRPEVRCPIGEARITPGFKLPASHVIHTVGPIYDADSNPEASLRNAYKNSLSVAKENNIQYIAFTAISCGVYGYPYEEAAAVALSTV 687 + + +GDIT+ S +DAIVN AN +LGGGG DGAIHR GP + C ++ P G A T L A VIHTVGP++ A + L + Y+ SL A E + +AF AIS GVY +P ++AA +A+ TV Sbjct: 4 ITLVQGDITRQS----ADAIVNAANSSLLGGGGVDGAIHRRGGPAILAECRRLRAGHLGKGLPTGRAVATTAGDLDARWVIHTVGPVWSATEDRSGLLASCYRESLRTADELGARTVAFPAISTGVYRWPMDDAARIAVETV 141
BLAST of FC868909 vs. ExPASy Swiss-Prot
Match: Y1951_FUSNN (UPF0189 protein FN1951 OS=Fusobacterium nucleatum subsp. nucleatum GN=FN1951 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.107e-22 Identity = 63/137 (45.99%), Postives = 81/137 (59.12%), Query Frame = 1 Query: 277 GDITKWSVDGSSDAIVNPANERMLGGGGADGAIHRAAGPELREACCKVPEVRPEVRCPIGEARITPGFKLPASHVIHTVGPIYDADSNPEAS-LRNAYKNSLSVAKENNIQYIAFTAISCGVYGYPYEEAAAVALST 684 GDITK +AIVN AN + GGG GAI +AAG EL + C ++ C GEA IT G+ LP ++IHTVGP Y N EA L +AY SL +A E I+ IAF +IS G+Y +P +E A +AL+T Sbjct: 11 GDITKIP---EVEAIVNAANSSLEMGGGVCGAIFKAAGSELAQECKEIGG------CNTGEAVITKGYNLPNKYIIHTVGPRYSTGENREAERLASAYYESLKLANEKGIRRIAFPSISTGIYRFPVDEGAKIALTT 138
BLAST of FC868909 vs. ExPASy Swiss-Prot
Match: Y189_ACISE (UPF0189 protein OS=Acinetobacter sp. (strain ED45-25) PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.594e-22 Identity = 57/139 (41.01%), Postives = 86/139 (61.87%), Query Frame = 1 Query: 274 KGDITKWSVDGSSDAIVNPANERMLGGGGADGAIHRAAGPELREACCKVPEVRPEVRCPIGEARITPGFKLPASHVIHTVGPIY-DADSNPEASLRNAYKNSLSVAKENNIQYIAFTAISCGVYGYPYEEAAAVALSTV 687 + DIT ++V AIVN AN+ +LGGGG D IH+ AGP ++E C ++ + + CP G+A +T LPA ++IH VGP + D + N L +AY N+L A E + ++F IS GVYG+P ++AA +A+ T+ Sbjct: 8 QADITAFAVH----AIVNSANKSLLGGGGLDYVIHKKAGPLMKEECVRLNQEKG--GCPTGQAEVTTAGNLPAKYLIHAVGPRWLDGEHNEPQLLCDAYSNALFKANEIHALTVSFPCISTGVYGFPPQKAAEIAIGTI 140
BLAST of FC868909 vs. ExPASy Swiss-Prot
Match: Y189_STRNO (UPF0189 protein in sno 5'region OS=Streptomyces nogalater PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.043e-21 Identity = 57/143 (39.86%), Postives = 81/143 (56.64%), Query Frame = 1 Query: 262 LVIKKGDITKWSVDGSSDAIVNPANERMLGGGGADGAIHRAAGPELREACCKVPEVRPEVRCPIGEARITPGFKLPASHVIHTVGPIYDADSNPEASLRNAYKNSLSVAKENNIQYIAFTAISCGVYGYPYEEAAAVALSTVQ 690 + + +GDIT+ +DA+VN AN +LGGGG DGAIHR GP + C + R P G A T L A VIHTVGP++ + + L + Y+ SL +A E + +AF A+S GVY +P +AA +A+ TV+ Sbjct: 4 ITLVQGDITRQH----ADALVNAANSSLLGGGGVDGAIHRRGGPAILAECRALRASRYGEGLPTGRAVATTAGDLDARWVIHTVGPVWSSTEDRSDLLASCYRESLRLAGELGARTVAFPALSTGVYRWPMGDAARIAVETVR 142
BLAST of FC868909 vs. ExPASy Swiss-Prot
Match: GDAP2_NEMVE (Protein GDAP2 homolog OS=Nematostella vectensis GN=gdap2 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.853e-21 Identity = 58/148 (39.19%), Postives = 87/148 (58.78%), Query Frame = 1 Query: 253 SAALVIKKGDITKWSVDGSSDAIVNPANERMLGGGGADGAIHRAAGPELREACCKVPEVRPEVRCPIGEARITPGFKLPASHVIHTVGPIYDA--DSNPEASLRNAYKNSLSVAKENNIQYIAFTAISCGVYGYPYEEAAAVALSTVQ 690 +A +V+ GDITK + +DAIVN NE + G +HRAAGPEL + C + + C GEA+I+ G+ LPA +VIHTVGP Y+ + E++L + Y+N++ + +EN I I ++ GYP E+ A +AL TV+ Sbjct: 50 NAKVVLWNGDITKLA----ADAIVNTTNESLSDRGALSERVHRAAGPELMQECRQ-----QLLGCRTGEAKISEGYNLPARYVIHTVGPRYNTKYKTAAESALFSCYRNTMRLVRENKISTIGVCVVNTTKRGYPPEDGAHIALRTVR 188
BLAST of FC868909 vs. ExPASy Swiss-Prot
Match: Y189_TREMD (UPF0189 protein in tap1-dppD intergenic region OS=Treponema medium PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.848e-19 Identity = 58/147 (39.46%), Postives = 81/147 (55.10%), Query Frame = 1 Query: 274 KGDITKWSVDGSSDAIVNPANERMLG-----GGGADGAIHRAAGPELREACCKVPEVRPEVRCPIGEARITPGFKLPASHVIHTVGPIYDADSNPE--ASLRNAYKNSLSVAKENNIQYIAFTAISCGVYGYPYEEAAAVALSTVQE 693 +GDIT VD AIVN AN M G D IH AG +LR C + + + P G A+ITP F LP +V+HTVGPI L N+Y + L++A EN ++ IAF IS GV+ +P ++AA +A++TV++ Sbjct: 91 RGDITTLKVD----AIVNAANSGMTGCWQPCHACIDNCIHTFAGVQLRTVCAGIMQEQGHEE-PTGTAKITPAFNLPCKYVLHTVGPIISGQLTDRDCTLLANSYTSCLNLAAENGVKSIAFCCISTGVFRFPAQKAAEIAVATVED 232
BLAST of FC868909 vs. ExPASy Swiss-Prot
Match: Y508_THEMA (UPF0189 protein TM_0508 OS=Thermotoga maritima GN=TM_0508 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.846e-18 Identity = 59/143 (41.26%), Postives = 82/143 (57.34%), Query Frame = 1 Query: 268 IKKGDITKWSVDGSSDAIVNPANERMLGGGGADGAIHRAAGPELREACCKVPEVRPEVRCPIGEARITPGFKLPASHVIHTVGPIYDADSNPEAS-LRNAYKNSLSVAKENNIQYIAFTAISCGVYGYPYEEAAAVALSTVQE 693 I KGDIT+ VD AIVN ANE + GGG GAI RA G ++E ++ + R V P GEA +T KL A +VIHTVGP++ S+ E L A N+L A E ++ I+ AIS G++G+P E A + +++ Sbjct: 431 IVKGDITREEVD----AIVNAANEYLKHGGGVAGAIVRAGGSVIQEESDRIVQERGRV--PTGEAVVTSAGKLKAKYVIHTVGPVWRGGSHGEDELLYKAVYNALLRAHELKLKSISMPAISTGIFGFPKERAVGIFSKAIRD 567 The following BLAST results are available for this feature:
BLAST of FC868909 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868909 ID=FC868909; Name=FC868909; organism=Citrus clementina; type=EST; length=695bpback to top |