FC868911

Overview
NameFC868911
Unique NameFC868911
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length650
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868911 vs. ExPASy Swiss-Prot
Match: C83B1_ARATH (Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.441e-14
Identity = 45/150 (30.00%), Postives = 80/150 (53.33%), Query Frame = 2
Query:   74 LLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGD-KPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLL 520
            L+ + ++  A  +F R     S RLPPGP   P+IGNL ++    P   L +L+K++GPI ++K G     V SSA +AKE+L+ QD +F  R +        +    + +      +R +RK+C  + FS  ++ + + +R ++ Q ++
Sbjct:    5 LIIAGLVAAAAFFFLRSTTKKSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMM 154          
BLAST of FC868911 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.189e-14
Identity = 52/163 (31.90%), Postives = 84/163 (51.53%), Query Frame = 2
Query:   74 LLFSWILVVALNYFSRGFKSGSR--RLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTA 556
            LL S  L V L   S    +  R  RLPPGP P+PV+GNL ++     +   + A+ +GP++S+ FG   TVV S++ +AKE+L+  D    +R    +      +   + W      +  +RK+CN   F+ ++L+A   LR  +  ++ A V+   RA TA
Sbjct:    5 LLLSVALAVVLIPLSLALLNRLRLGRLPPGPRPWPVLGNLRQIKPIRCRCFQEWAERYGPVISVWFGSGLTVVVSTSELAKEVLKENDQQLADRPRNRSTQRFSRNGQDLIWADYGPHYIKVRKLCNLELFTPKRLEA---LRPIREDEVTAMVESVYRAATA 164          
BLAST of FC868911 vs. ExPASy Swiss-Prot
Match: C71DF_MENPI (Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D15 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.439e-14
Identity = 52/188 (27.66%), Postives = 95/188 (50.53%), Query Frame = 2
Query:   74 LLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNL-LELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDLAD 634
            L+ ++ + + +N + +    G  + PPGP   P+IG+L L  G  P  +LA +AK +GP+  ++ G+V +VV SS    KE ++  D +  NR          +    + + P +  WR +RKIC S   SSR + +   +R+ ++  LL +++ +  AG A+ + +     T ++I    F   + D
Sbjct:   13 LVVTYTISLLINQWRKPKPQG--KFPPGPPKLPLIGHLHLLWGKLPQHALASVAKEYGPVAHVQLGEVFSVVLSSREATKEAMKLVDPACANRFESIGTRIMWYDNEDIIFSPYSEHWRQMRKICVSELLSSRNVRSFGFIRQDEVSRLLRHLRSS--AGAAVDMTERIETLTCSIICRAAFGSVIRD 196          
BLAST of FC868911 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.439e-14
Identity = 48/188 (25.53%), Postives = 95/188 (50.53%), Query Frame = 2
Query:   71 WLLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDLAD 634
            +L F  +L + L  F +  K    +LPPGP   P+IGNL +  +   ++   L++ +GPI+ L++G V  VV SS   A+E+L+  D   C+R       A  ++   + + P    WR +RK+     FSS++L + +++R ++    +  + +     + +++ +  F    +++    F I+L +
Sbjct:    4 FLCFLCLLPLIL-IFLKNLKPSKWKLPPGPKKLPIIGNLHQRRELHPRNSRNLSEKYGPIVFLRYGFVPVVVISSKEAAEEVLKTHDLECCSRPETVGTRAISYNFKDIGFAPYGEDWRTMRKLSVVELFSSKKLQSFRYIREEENDLCVKKLSDLASRRSLVNLEKTLFTLVGSIVCRIGFGINLRE 190          
BLAST of FC868911 vs. ExPASy Swiss-Prot
Match: C71A3_SOLME (Cytochrome P450 71A3 (Fragment) OS=Solanum melongena GN=CYP71A3 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.439e-14
Identity = 43/153 (28.10%), Postives = 81/153 (52.94%), Query Frame = 2
Query:   77 LFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQE 535
            LF +IL +   +F+    + +++LPP P   P+IGNL +LG  PH+SL KL+K +GP+M L  G    +V SS    ++I++  D  + NR          +    + + P    WR +R I   H  S++++ + +  R ++  +++  +++
Sbjct:    4 LFVFILFLHKCFFTTS--NNNKKLPPSPRKLPIIGNLHQLGLHPHRSLHKLSKKYGPVMLLHLGSKPVIVASSVEAVRDIMKTNDLVWSNRPKSKMADRLIYGSKDVSFSPHGEYWRQIRSITVLHLLSNKRVQSYRAAREEETSNMIEKLKQ 154          
BLAST of FC868911 vs. ExPASy Swiss-Prot
Match: C71AR_ARATH (Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=CYP71A27 PE=2 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 7.103e-14
Identity = 41/153 (26.80%), Postives = 82/153 (53.59%), Query Frame = 2
Query:  143 RLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLI 601
            +LPP P   PVIGNL +LG  PH+ L  L+  +GP+M L FG+V  +V S   +  +I++  D  F NR    AI         + + P    W++++ +   H  +++ + + ++LR ++I+ +   ++E   + +++++ +     T ++I
Sbjct:   32 KLPPSPWRLPVIGNLHQLGPNPHRYLHSLSLRYGPLMLLHFGRVPVLVVSCPDVTNDIMKTHDLKFANRPKSKAINIFMEGGRDIIFGPYGEDWKSMKSLGVVHLLNNKMVRSFENLREEEIKVMTEKLEEASSSSSSVNLSKLLMTLTNDII 184          
BLAST of FC868911 vs. ExPASy Swiss-Prot
Match: C71D9_SOYBN (Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.582e-13
Identity = 46/157 (29.30%), Postives = 77/157 (49.04%), Query Frame = 2
Query:  146 LPPGPTPYPVIGNLLEL--GDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNT 610
            LPPGP   P+IGN+  L     PH  L  L+  +G +M LK G+V+T+V SS   AKE+++  D  F +R    A     +   G+ + P    WR LRKI      SS+++ + Q +R + +   +  +      G+ +++ +    T   + + T
Sbjct:   35 LPPGPWKLPIIGNMHNLVGSPLPHHRLRDLSAKYGSLMHLKLGEVSTIVVSSPEYAKEVMKTHDHIFASRPYVLAAEIMDYDFKGVAFTPYGDYWRQLRKIFALELLSSKRVQSFQPIREEVLTSFIKRMA--TIEGSQVNVTKEVISTVFTITART 189          
BLAST of FC868911 vs. ExPASy Swiss-Prot
Match: C71BO_ARATH (Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=CYP71B24 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.067e-13
Identity = 50/181 (27.62%), Postives = 88/181 (48.62%), Query Frame = 2
Query:   74 LLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIF 616
            +L  +I +++L    +  K  +R LPP P   PVIGNL +L    HK L  L+K HGP++ L+ G +  VV SS   A+E L+  D   C R I +           +   P     R LRK+     FS+ ++ + +++R ++   ++  ++E     +++ + Q  F    ++I  + F
Sbjct:    3 ILLYFIALLSLIIIKK-IKDSNRNLPPSPLKLPVIGNLYQLRGLFHKCLHDLSKKHGPVLLLRLGFLDMVVISSTEAAEEALKVHDLECCTRPITNVTSKLWRDGQDIGLAPYGESLRELRKLSFLKFFSTTKVRSFRYIREEENDLMVKKLKEAALKKSSVDLSQTLFGLVGSIIFRSAF 182          
BLAST of FC868911 vs. ExPASy Swiss-Prot
Match: C7D95_MENSP (Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.604e-13
Identity = 50/171 (29.24%), Postives = 88/171 (51.46%), Query Frame = 2
Query:  128 KSGSRR-LPPGPTPYPVIGNL-LELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDLAD 634
            KS SR+ LPPGP   P++G+L L  G  P  ++A +AK +GP+  ++ G+V +VV SS    KE ++  D +  +R          +    + + P +  WR +RKIC S   S+R + +   +R+ ++  LL ++Q +  AG  + + +     T ++I    F   + D
Sbjct:   27 KSESRQNLPPGPPKLPLVGHLHLLWGKLPQHAMADMAKKYGPVTHVQLGEVFSVVLSSREATKEAMKLLDPACADRFESIGTRIMWYDNDDIIFSPYSDHWRQMRKICVSELLSARNVRSFGFIRQDEMSRLLRHLQSS--AGETVDMTERIATLTCSIICRAAFGAIIND 195          
BLAST of FC868911 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.013e-13
Identity = 36/133 (27.07%), Postives = 71/133 (53.38%), Query Frame = 2
Query:  143 RLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENC 541
            + PPGP+P P++GNL ++     +   + A+ +GPI+S+  G +  VV SSA +AKE+L+  D    +R    +  A   +   + W      +  +RK+C    F+ ++L++ + +R  ++  ++  V  +C
Sbjct:   26 KFPPGPSPKPIVGNLYDIKPVRFRCYYEWAQSYGPIISVWIGSILNVVVSSAELAKEVLKEHDQKLADRHRNRSTEAFSRNGQDLIWADYGPHYVKVRKVCTLELFTPKRLESLRPIREDEVTAMVESVFRDC 158          
The following BLAST results are available for this feature:
BLAST of FC868911 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
C83B1_ARATH2.441e-1430.00Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CY... [more]
C98A1_SORBI3.189e-1431.90Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C71DF_MENPI5.439e-1427.66Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D... [more]
C71BS_ARATH5.439e-1425.53Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
C71A3_SOLME5.439e-1428.10Cytochrome P450 71A3 (Fragment) OS=Solanum melonge... [more]
C71AR_ARATH7.103e-1426.80Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=C... [more]
C71D9_SOYBN1.582e-1329.30Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=... [more]
C71BO_ARATH2.067e-1327.62Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=C... [more]
C7D95_MENSP4.604e-1329.24Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D9... [more]
C98A3_ARATH6.013e-1327.07Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31006D09EF AbioticL1 Citrus clementina cDNA clone C31006D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868911 ID=FC868911; Name=FC868911; organism=Citrus clementina; type=EST; length=650bp
GAATTTGGTGTTTCCAGAGCTTCAACAAAAGAGAGCGAGATTAAAGATGG
ATATGGTAAGCTGCGTACCATGGCTTCTATTCTCGTGGATTTTGGTCGTC
GCTTTAAATTACTTTTCAAGAGGATTCAAATCTGGATCCAGAAGGCTTCC
ACCGGGACCGACGCCTTATCCGGTGATCGGAAACCTCCTGGAACTCGGCG
ACAAACCTCACAAGTCACTTGCTAAACTTGCCAAGATTCATGGCCCCATA
ATGAGTCTAAAATTTGGCCAGGTGACCACAGTTGTCTTTTCTTCTGCAGC
CATGGCCAAAGAAATCCTTCAAAATCAAGACACATCTTTCTGTAATCGAA
CAATCCCAGACGCAATCTACGCCCACGGCCATCATGAATTCGGGATGCCC
TGGCTGCCTGTGGCGACACTGTGGAGAAATCTTCGAAAAATATGCAACTC
ACATGCTTTCTCTAGTCGCCAACTCGATGCCAATCAGCACCTTCGGCGTA
AGAAAATCCAAGATCTTCTAGCTTATGTCCAAGAAAATTGCCGTGCAGGT
ACAGCAATACATATTGGCCAAGCTGCTTTCGACACTACGCTTAATTTGAT
ATCCAACACAATTTTTTCTATTGACTTGGCTGATCCCACATCAAAACTGC
back to top