FC868911

Overview
NameFC868911
Unique NameFC868911
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length650
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868911 vs. ExPASy Swiss-Prot
Match: C71AJ_ARATH (Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=CYP71A19 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.013e-13
Identity = 45/157 (28.66%), Postives = 81/157 (51.59%), Query Frame = 2
Query:  146 LPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNR---TIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQ--ENCRAGTAIHIGQAAFDTTLNLI 601
            LPP P   PVIGNL +L    H+SL  L+  +GP+M L FG+   ++ SSA +A +IL+  D    NR    + D I   G     + + P    W+ ++ IC  +  S++ + + + +R  +I+ ++  V+   +C   + +++ Q     T ++I
Sbjct:   33 LPPSPWRLPVIGNLHQLSLNTHRSLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDILKTYDVICANRPKTKVIDKILRGGR---DVAFAPYGEYWKQMKSICIQNLLSNKMVRSYKKIREDEIKLMIEKVENASSCSPPSPVNLSQLFMTLTNDII 186          
BLAST of FC868911 vs. ExPASy Swiss-Prot
Match: C71AF_ARATH (Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=CYP71A15 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.013e-13
Identity = 41/157 (26.11%), Postives = 78/157 (49.68%), Query Frame = 2
Query:  146 LPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIF 616
            LPP P   PVIGNL +L   PH+SL  L+  +GP+M L FG+V  +V SS+ +A ++++  D    NR     I    +    + + P    WR ++ +C  H  + + + +   +R ++   ++  V++     + +++ +     T ++ S   F
Sbjct:   32 LPPSPWRVPVIGNLHQLSLHPHRSLRSLSHRYGPLMLLHFGRVPILVVSSSDVAHDLMKTHDLKVANRPRLKVIETILNGGREVVFSPYGDYWRQIKTVCVVHLLNKKMVQSFAKVREEERSVMMEKVEKASSDSSPLNLSKLLITLTSDVASRVSF 188          
BLAST of FC868911 vs. ExPASy Swiss-Prot
Match: C82A2_SOYBN (Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.854e-13
Identity = 56/170 (32.94%), Postives = 85/170 (50.00%), Query Frame = 2
Query:   92 LVVALNYFSRG--FKSGSRRLPPGPTPYPVIGNL-LELGDK-PHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAH--GHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFD 583
            L++ L  F RG  +KSG    P     +P+IG+L L LG K PHK+L  LA  +GPI S+K G    VV S+  MAKE     D +    ++PD I A+   ++   +   P    WR LRKI  S   S  +++   H+R  ++Q  +  +  + R+   +  G A  +
Sbjct:   17 LILLLYLFLRGGSWKSGEEGPPTVAGAWPIIGHLPLLLGSKTPHKTLGDLADKYGPIFSIKIGAKNAVVVSNWEMAKECYTTNDIAV--SSLPDLISANLLCYNRSMIVVAPYGPYWRQLRKILMSEFLSPSRVEQLHHVRVSEVQSSITELFRDWRSNKNVQSGFATVE 184          
BLAST of FC868911 vs. ExPASy Swiss-Prot
Match: C71BG_ARATH (Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=CYP71B16 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.854e-13
Identity = 47/184 (25.54%), Postives = 85/184 (46.20%), Query Frame = 2
Query:   89 ILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNR--TIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDLAD 634
            I +V+L +  +  K     LPP P  +PVIGNL ++G+ PH+S  +LA+  G +M L FG V   V SS   A+E+L+  D   C R   +   + + G  +  + + P    WR  RK      F  +++    ++  ++   L+  + E+      + + ++ F    +++    F     D
Sbjct:   11 ITLVSLIFVVKKIKHSKWDLPPSPPTFPVIGNLHQVGELPHRSFQRLAERTGHVMLLHFGFVPVTVISSREAAEEVLRTHDLKCCTRPKLVGSRLISRGFKD--ISFTPYGEEWRERRKFLVRELFCFKKVQYFGYIVEEECNLLVKKLTESAVGRPPVDLSKSLFWLAASILFRIAFGQSFHD 192          
BLAST of FC868911 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.026e-12
Identity = 45/181 (24.86%), Postives = 94/181 (51.93%), Query Frame = 2
Query:   74 LLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNR---TIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQE-NCRAG-TAIHIGQAAFDTTLNLI 601
            L  + +L + L    +   + +  LPP P   PVIGNL +L    H+SL  L+  +GP+M L FG+   ++ SSA +A ++++  D    NR    + D I + G     + + P    WR ++ IC  +  +++ + + + +R ++I+ ++  +++ +C +  + +++ Q     T ++I
Sbjct:    8 LCLTTLLALLLKSILKRTATKNFNLPPSPWRLPVIGNLHQLSLHTHRSLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDVMKTHDLVCANRPKTKVVDKILSGGR---DVAFAPYGEYWRQMKSICIQNLLNNKMVRSYEKIREEEIKRMIEKLEKASCSSSPSPVNLSQILMTLTNDII 185          
BLAST of FC868911 vs. ExPASy Swiss-Prot
Match: C81F1_ARATH (Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CYP81F1 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.340e-12
Identity = 53/166 (31.93%), Postives = 82/166 (49.40%), Query Frame = 2
Query:   89 ILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQ-DTSFCNRTIP-DAIY-AHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLA----YVQENCRAGTAIHI 565
            +L + ++Y     K+    LPPGP   P +G+L  +    H+ L + +  +GPI SL+FG    VV +S ++A+E    Q D    +R +   A Y A+ H   G    P    WRNLR+IC+    SS +L   QH+R+ +I  +L     Y Q +  +    HI
Sbjct:    9 LLFLVISYKFLYSKTQRFNLPPGPPSRPFVGHLHLMKPPIHRLLQRYSNQYGPIFSLRFGSRRVVVITSPSLAQESFTGQNDIVLSSRPLQLTAKYVAYNHTTVGT--APYGDHWRNLRRICSQEILSSHRLINFQHIRKDEILRMLTRLSRYTQTSNESNDFTHI 172          
BLAST of FC868911 vs. ExPASy Swiss-Prot
Match: C7D95_MENGR (Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.340e-12
Identity = 46/166 (27.71%), Postives = 84/166 (50.60%), Query Frame = 2
Query:  140 RRLPPGPTPYPVIGNL-LELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDLAD 634
            + LPPGP   P++G+L L  G  P  ++A +AK +GP+  ++ G+V +VV SS    KE ++  D +  +R          +    + + P +  WR +RKIC S   S+R + +   +R+ ++  LL ++Q +  AG  + + +     T ++I    F   + D
Sbjct:   32 QNLPPGPPKLPLVGHLHLLWGKLPQHAMADMAKKYGPVTHVQLGEVFSVVLSSREATKEAMKLLDPACADRFESIGTRIMWYDNDDIIFSPYSDHWRQMRKICVSELLSARNVRSFGFIRQDEMSRLLRHLQSS--AGETVDMTERIATLTCSIICRAAFGAIIND 195          
BLAST of FC868911 vs. ExPASy Swiss-Prot
Match: C519B_DICDI (Probable cytochrome P450 519B1 OS=Dictyostelium discoideum GN=cyp519b1 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.340e-12
Identity = 51/194 (26.29%), Postives = 97/194 (50.00%), Query Frame = 2
Query:   47 MDMVSCVPWLLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDL 628
            M++++ + + +  WI+      F R  +  S   PP P   P+IG+L +L   PH+SL +LAK++G + SL  G   TVV +  +  K++   Q  +F NR  P +I    + + G+ +      W+  RK+ +S A +  ++    +L  K+ ++L+  + E        H  +     +LN+I + +FS ++
Sbjct:    1 MNLINLILYFILFWIVFD----FIRKNRRISFNDPPSPWALPIIGHLHKLSLNPHRSLTELAKVYGGVYSLHIGDSKTVVITDVSAFKDVTIKQFKNFANRPQPKSIRVITNFK-GLAFADY-DQWQKTRKLVSS-ALTKTKIKTFNNLIEKQTENLIESMNEFSNKNELFHPRKYLTKYSLNIILSMLFSKEI 187          
BLAST of FC868911 vs. ExPASy Swiss-Prot
Match: TCMO_POPTM (Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.750e-12
Identity = 52/173 (30.06%), Postives = 87/173 (50.29%), Query Frame = 2
Query:   47 MDMVSCVPWLLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGDK-PHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRT---IPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGT 553
            MD++     LL S++ ++     S+  +    +LPPGP P PV GN L++GD   H++L  LAK  G I+ L+ GQ   VV SS  ++KE+L  Q   F +RT   + D     G     M +      WR +R+I     F+++ +   ++   ++   ++  V++N  A T
Sbjct:    1 MDLLLLEKTLLGSFVAILVAILVSK-LRGKRFKLPPGPLPVPVFGNWLQVGDDLNHRNLTDLAKKFGDILLLRMGQRNLVVVSSPELSKEVLHTQGVEFGSRTRNVVFDIFTGKGQ---DMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEEEAAQVVEDVKKNPGAAT 169          
BLAST of FC868911 vs. ExPASy Swiss-Prot
Match: TCMO_POPKI (Trans-cinnamate 4-monooxygenase OS=Populus kitakamiensis GN=CYP73A16 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.750e-12
Identity = 53/173 (30.64%), Postives = 86/173 (49.71%), Query Frame = 2
Query:   47 MDMVSCVPWLLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGDK-PHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRT---IPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGT 553
            MD++     LL S++ V+     S+  +    +LPPGP P PV GN L++GD   H++L  LAK  G I  L+ GQ   VV SS  ++KE+L  Q   F +RT   + D     G     M +      WR +R+I     F+++ +   ++   ++   ++  V++N  A T
Sbjct:    1 MDLLLLEKTLLGSFVAVLVAILVSK-LRGKRFKLPPGPLPVPVFGNWLQVGDDLNHRNLTDLAKKFGDIFLLRMGQRNLVVVSSPDLSKEVLHTQGVEFGSRTRNVVFDIFTGKGQ---DMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEEEAAQVVEDVKKNPEAAT 169          
The following BLAST results are available for this feature:
BLAST of FC868911 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
C71AJ_ARATH6.013e-1328.66Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=C... [more]
C71AF_ARATH6.013e-1326.11Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=C... [more]
C82A2_SOYBN7.854e-1332.94Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=... [more]
C71BG_ARATH7.854e-1325.54Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=C... [more]
C71AK_ARATH1.026e-1224.86Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]
C81F1_ARATH1.340e-1231.93Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CY... [more]
C7D95_MENGR1.340e-1227.71Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D... [more]
C519B_DICDI1.340e-1226.29Probable cytochrome P450 519B1 OS=Dictyostelium di... [more]
TCMO_POPTM1.750e-1230.06Trans-cinnamate 4-monooxygenase OS=Populus tremulo... [more]
TCMO_POPKI1.750e-1230.64Trans-cinnamate 4-monooxygenase OS=Populus kitakam... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31006D09EF AbioticL1 Citrus clementina cDNA clone C31006D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868911 ID=FC868911; Name=FC868911; organism=Citrus clementina; type=EST; length=650bp
GAATTTGGTGTTTCCAGAGCTTCAACAAAAGAGAGCGAGATTAAAGATGG
ATATGGTAAGCTGCGTACCATGGCTTCTATTCTCGTGGATTTTGGTCGTC
GCTTTAAATTACTTTTCAAGAGGATTCAAATCTGGATCCAGAAGGCTTCC
ACCGGGACCGACGCCTTATCCGGTGATCGGAAACCTCCTGGAACTCGGCG
ACAAACCTCACAAGTCACTTGCTAAACTTGCCAAGATTCATGGCCCCATA
ATGAGTCTAAAATTTGGCCAGGTGACCACAGTTGTCTTTTCTTCTGCAGC
CATGGCCAAAGAAATCCTTCAAAATCAAGACACATCTTTCTGTAATCGAA
CAATCCCAGACGCAATCTACGCCCACGGCCATCATGAATTCGGGATGCCC
TGGCTGCCTGTGGCGACACTGTGGAGAAATCTTCGAAAAATATGCAACTC
ACATGCTTTCTCTAGTCGCCAACTCGATGCCAATCAGCACCTTCGGCGTA
AGAAAATCCAAGATCTTCTAGCTTATGTCCAAGAAAATTGCCGTGCAGGT
ACAGCAATACATATTGGCCAAGCTGCTTTCGACACTACGCTTAATTTGAT
ATCCAACACAATTTTTTCTATTGACTTGGCTGATCCCACATCAAAACTGC
back to top