FC868934

Overview
NameFC868934
Unique NameFC868934
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length660
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868934 vs. ExPASy Swiss-Prot
Match: ALF2_PLABA (Fructose-bisphosphate aldolase 2 OS=Plasmodium berghei (strain Anka) GN=ALDO2 PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 3.938e-60
Identity = 119/221 (53.85%), Postives = 154/221 (69.68%), Query Frame = 1
Query:    4 TNDESWSTGLDGLASRTAAYYQQGARFAKWRTVVSIPNG---PSALAVKEAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMN-QGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLA 654
            T+DE  + GLDGLA R   YY+ GARFAKWR V+ I      P+ L+++E +WGLARYA+I Q N LVPIVEPEIL DG H I+    V +KV A VF  L +N V+ EG  LKP+MVT G +C EK     +  +T++ L R +PPA+PG+ FLSGGQSE +A++NLN++N  GP+PW ++FSY RALQ + L TW G+ ENV  A+  LL RA+ANSLA
Sbjct:  113 TDDEKSTQGLDGLAERCKEYYKAGARFAKWRAVLVIDPAKGKPTDLSIQEVSWGLARYASICQQNKLVPIVEPEILADGAHTIEVCATVTQKVLASVFKALHDNGVLLEGASLKPNMVTAGYDCTEKTKTDDIGFFTVRTLRRTVPPALPGVAFLSGGQSEEDASINLNSINVLGPHPWALTFSYGRALQASVLNTWQGKKENVAKARRVLLQRAEANSLA 333          
BLAST of FC868934 vs. ExPASy Swiss-Prot
Match: ALDOA_PONAB (Fructose-bisphosphate aldolase A OS=Pongo abelii GN=ALDOA PE=2 SV=3)

HSP 1 Score: 231.106 bits (588), Expect = 3.938e-60
Identity = 122/221 (55.20%), Postives = 158/221 (71.49%), Query Frame = 1
Query:    1 GTNDESWSTGLDGLASRTAAYYQQGARFAKWRTVVSI-PNGPSALAVKEAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLA 654
            GTN E+ + GLDGL+ R A Y + GA FAKWR V+ I  + PSALA+ E A  LARYA+I Q NG+VPIVEPEIL DGDH + R   V +KV A V+  L+++++  EG LLKP+MVTPG  C +K + +++   T+  L R +PPAV GI FLSGGQSE EA++NLNA+N+ P   PW ++FSY RALQ + LK WGG+ EN+KAAQ+  + RA ANSLA
Sbjct:  118 GTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHIYLEGTLLKPNMVTPGHACTQKFSHEEIVMATVTALRRTVPPAVTGITFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLA 338          
BLAST of FC868934 vs. ExPASy Swiss-Prot
Match: ALDOA_PANTR (Fructose-bisphosphate aldolase A OS=Pan troglodytes GN=ALDOA PE=2 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 3.938e-60
Identity = 122/221 (55.20%), Postives = 158/221 (71.49%), Query Frame = 1
Query:    1 GTNDESWSTGLDGLASRTAAYYQQGARFAKWRTVVSI-PNGPSALAVKEAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLA 654
            GTN E+ + GLDGL+ R A Y + GA FAKWR V+ I  + PSALA+ E A  LARYA+I Q NG+VPI EPEIL DGDH + R   V +KV A V+  L+++++  EG LLKP+MVTPG  C +K + +++A  T+  L R +PPAV GI FLSGGQSE EA++NLNA+N+ P   PW ++FSY RALQ + LK WGG+ EN+KAAQ+  + RA ANSLA
Sbjct:  118 GTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLARYASICQQNGIVPIAEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHIYLEGTLLKPNMVTPGHACTQKFSHEEIAMATVTALRRTVPPAVTGITFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLA 338          
BLAST of FC868934 vs. ExPASy Swiss-Prot
Match: ALF1_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 4.354e-59
Identity = 121/223 (54.26%), Postives = 153/223 (68.61%), Query Frame = 1
Query:    1 GTNDESWSTGLDGLASRTAAYYQQGARFAKWRTVVSI-PNGPSALAVKEAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQL 660
            GT+ E+ + G D L +R   YY+ GARFAKWR V+ I PN PS L++++ A GLARYA I Q+NGLV  VEPEIL DG H I +   V + V A  +  L + +V+ EG LLKP+MVTPG++   K +P+ + EYT+  L R +P AVPGI+FLSGGQSE +ATLNLNAMN+     PW +SFS+ RALQ + LKTW G+ ENV  AQD  L R KANS A L
Sbjct:  113 GTDGETTTQGFDSLGARCQQYYKAGARFAKWRAVLKIGPNEPSELSIQQNAQGLARYAIICQENGLVLFVEPEILTDGSHDIAKCAAVTETVLAACYKALNDQHVLLEGTLLKPNMVTPGSD-SPKVSPEVIGEYTVNALRRTVPAAVPGIVFLSGGQSEEQATLNLNAMNKFDVVKPWTLSFSFGRALQQSTLKTWSGKKENVGKAQDVFLARCKANSEATL 334          
BLAST of FC868934 vs. ExPASy Swiss-Prot
Match: ALF_SCHMA (Fructose-bisphosphate aldolase OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 9.700e-59
Identity = 123/221 (55.66%), Postives = 157/221 (71.04%), Query Frame = 1
Query:    1 GTNDESWSTGLDGLASRTAAYYQQGARFAKWRTVVSIPNG-PSALAVKEAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQ--GPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLA 654
            GT++E+ + GLD LASR A Y++ G RFAKWR V+ I +  PS LA+ E A  LARYA+I Q NGLVPIVEPE+L DGDH +     V ++V A V+  LA+++V  EG LLKP+MVT G  CK+  TPQ+ A  T++ L R +PPAVPGI FLSGGQSE++AT NLN +N+  GP PW ++FS+ RALQ + L TW G+ ENV AAQ+ LL  AKAN  A
Sbjct:  118 GTDNETTTQGLDDLASRCAEYWRLGCRFAKWRCVLKISSHTPSYLAMLENANVLARYASICQQNGLVPIVEPEVLPDGDHDLLTAQRVTEQVLAFVYKALADHHVYLEGTLLKPNMVTAGQACKKAYTPQENALATVRALQRTVPPAVPGITFLSGGQSELDATKNLNEINKIPGPKPWALTFSFGRALQASVLATWKGKKENVHAAQEELLKLAKANGAA 338          
BLAST of FC868934 vs. ExPASy Swiss-Prot
Match: ALDOB_CHICK (Fructose-bisphosphate aldolase B OS=Gallus gallus GN=ALDOB PE=3 SV=3)

HSP 1 Score: 226.483 bits (576), Expect = 9.700e-59
Identity = 125/221 (56.56%), Postives = 150/221 (67.87%), Query Frame = 1
Query:    1 GTNDESWSTGLDGLASRTAAYYQQGARFAKWRTVVSIPNG-PSALAVKEAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQG--PNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLA 654
            GTN E+   GLD LA R A Y + GA F KWR V+ I +  PS LA++E A  LARYA+I Q NGLVPIVEPE+L DGDH + R   V +KV A V+  L +++V  EG LLKP+MVT G  C +K TPQ VA  T+  L R +P AVPGI FLSGGQSE EA+LNLNAMNQ   P PW ++FSY RALQ + L  W G+ EN KAAQ+    RA+ NSLA
Sbjct:  118 GTNGETTIQGLDKLAERCAQYKKDGADFGKWRAVLKISSTTPSQLAIQENANTLARYASICQQNGLVPIVEPEVLPDGDHDLQRCQYVTEKVLAAVYKALNDHHVYLEGTLLKPNMVTAGHSCPKKYTPQDVAVATVTTLLRTVPAAVPGICFLSGGQSEEEASLNLNAMNQSPLPKPWKLTFSYGRALQASALAAWLGKSENKKAAQEAFCKRAQINSLA 338          
BLAST of FC868934 vs. ExPASy Swiss-Prot
Match: ALDOB_SHEEP (Fructose-bisphosphate aldolase B OS=Ovis aries GN=ALDOB PE=2 SV=2)

HSP 1 Score: 225.328 bits (573), Expect = 2.161e-58
Identity = 122/221 (55.20%), Postives = 150/221 (67.87%), Query Frame = 1
Query:    1 GTNDESWSTGLDGLASRTAAYYQQGARFAKWRTVVSIPNG-PSALAVKEAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMN--QGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLA 654
            GTN E+   GLDGL+ R A Y + GA F KWR V+ I N  PS LA++E A  LARYA+I Q NGLVPIVEPE++ DG H ++    V +KV A V+  L +++V  EG LLKP+MVT G  C +K TP+QVA  T+  LHR +P AVPGI FLSGG SE +ATLNLNA+N    P PW +SFSY RALQ + L  WGG+ EN KA Q+  + RA ANS A
Sbjct:  118 GTNKETTVQGLDGLSERCAQYKKDGADFGKWRAVLKIDNQCPSHLAIQENANTLARYASIYQQNGLVPIVEPEVIPDGSHDMEHCQYVTEKVLAAVYKALNDHHVYLEGTLLKPNMVTAGHACTKKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAENKKATQEAFMKRALANSQA 338          
BLAST of FC868934 vs. ExPASy Swiss-Prot
Match: ALDOB_MOUSE (Fructose-bisphosphate aldolase B OS=Mus musculus GN=Aldob PE=1 SV=3)

HSP 1 Score: 225.328 bits (573), Expect = 2.161e-58
Identity = 120/221 (54.30%), Postives = 151/221 (68.33%), Query Frame = 1
Query:    1 GTNDESWSTGLDGLASRTAAYYQQGARFAKWRTVVSIPNG-PSALAVKEAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQG--PNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLA 654
            GTN E+   GLDGL+ R A Y + G  F KWR V+ I +  PS+LA++E A  LARYA+I Q NGLVPIVEPE+L DGDH ++    V++KV A V+  L +++V  EG LLKP+MVT G  C +K TP+QVA  T+  LHR +P AVPGI FLSGG SE +ATLNLNA+N+   P PW +SFSY RALQ + L  WGG+  N KA Q+  + RA AN  A
Sbjct:  118 GTNKETTIQGLDGLSERCAQYKKDGVDFGKWRAVLRIADQCPSSLAIQENANALARYASICQQNGLVPIVEPEVLPDGDHDLEHCQYVSEKVLAAVYKALNDHHVYLEGTLLKPNMVTAGHACTKKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINRCPLPRPWKLSFSYGRALQASALAAWGGKAANKKATQEAFMKRAMANCQA 338          
BLAST of FC868934 vs. ExPASy Swiss-Prot
Match: ALF1_LAMJA (Fructose-bisphosphate aldolase, muscle type OS=Lampetra japonica PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 2.822e-58
Identity = 122/221 (55.20%), Postives = 150/221 (67.87%), Query Frame = 1
Query:    1 GTNDESWSTGLDGLASRTAAYYQQGARFAKWRTVVSI-PNGPSALAVKEAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLA 654
            GTN E  + GLDGLA R A Y + GA FAKWR V+ I PN PS L++ E A  LARYA I Q NGLVPIVEPEIL DGDH +     + +KV A  +  L++++V  EG LLKP+MVT G        P+QVA  TL  L R +PPAVPGI FLSGGQSE +A+++LNA+N+     PW ++FSY RALQ + LK WGG+ EN+KAAQD L+ RAK N  A
Sbjct:  118 GTNGEGTTQGLDGLAERCAQYKKDGADFAKWRCVLKISPNTPSRLSIVENANVLARYATICQQNGLVPIVEPEILPDGDHDLKTCQYITEKVLAATYKALSDHHVYLEGTLLKPNMVTVGTAAPASTRPEQVAMATLTALRRTVPPAVPGITFLSGGQSEEDASIHLNAINKLHLIKPWALTFSYGRALQASVLKAWGGKKENLKAAQDELMRRAKINGQA 338          
BLAST of FC868934 vs. ExPASy Swiss-Prot
Match: ALDOB_DANRE (Fructose-bisphosphate aldolase B OS=Danio rerio GN=aldob PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 3.686e-58
Identity = 123/221 (55.66%), Postives = 151/221 (68.33%), Query Frame = 1
Query:    1 GTNDESWSTGLDGLASRTAAYYQQGARFAKWRTVVSIPNG-PSALAVKEAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLA 654
            GT+ E+ + GLDGL+ R A Y + G  FAKWR V+ I +  PSAL + E A  LARYA+I Q NGLVPIVEPEIL DGDH + +     +KV A V+  L++++V  EG LLKP+MVT G  C +K TP +VA  T+  L R +P AVPGI FLSGGQSE EA+LNLNAMNQ     PW +SFSY RALQ + L  W G+  N KA+QD  +TRAK NSLA
Sbjct:  118 GTDGETTTQGLDGLSERCAQYKKDGCDFAKWRCVLKISDSCPSALGIAENANVLARYASICQQNGLVPIVEPEILPDGDHDLKQCQYATEKVLAAVYKALSDHHVYLEGTLLKPNMVTAGHSCTKKYTPLEVAMATVTALRRTVPAAVPGICFLSGGQSEEEASLNLNAMNQLSLHRPWKLSFSYGRALQASALSAWKGQAANKKASQDAFVTRAKINSLA 338          
The following BLAST results are available for this feature:
BLAST of FC868934 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALF2_PLABA3.938e-6053.85Fructose-bisphosphate aldolase 2 OS=Plasmodium ber... [more]
ALDOA_PONAB3.938e-6055.20Fructose-bisphosphate aldolase A OS=Pongo abelii G... [more]
ALDOA_PANTR3.938e-6055.20Fructose-bisphosphate aldolase A OS=Pan troglodyte... [more]
ALF1_PEA4.354e-5954.26Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_SCHMA9.700e-5955.66Fructose-bisphosphate aldolase OS=Schistosoma mans... [more]
ALDOB_CHICK9.700e-5956.56Fructose-bisphosphate aldolase B OS=Gallus gallus ... [more]
ALDOB_SHEEP2.161e-5855.20Fructose-bisphosphate aldolase B OS=Ovis aries GN=... [more]
ALDOB_MOUSE2.161e-5854.30Fructose-bisphosphate aldolase B OS=Mus musculus G... [more]
ALF1_LAMJA2.822e-5855.20Fructose-bisphosphate aldolase, muscle type OS=Lam... [more]
ALDOB_DANRE3.686e-5855.66Fructose-bisphosphate aldolase B OS=Danio rerio GN... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31006F11EF AbioticL1 Citrus clementina cDNA clone C31006F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868934 ID=FC868934; Name=FC868934; organism=Citrus clementina; type=EST; length=660bp
GGTACCAATGATGAGTCATGGTCCACGGGTCTTGATGGCCTGGCTTCTCG
CACTGCTGCTTACTACCAACAGGGAGCTCGTTTCGCCAAATGGCGTACTG
TTGTGAGCATTCCCAATGGCCCATCTGCCTTGGCAGTCAAGGAAGCCGCC
TGGGGTCTTGCCCGCTATGCTGCCATTGCTCAAGACAACGGATTGGTCCC
AATTGTGGAGCCAGAAATCTTGCTTGATGGTGATCATGGCATTGACAGGA
CTTTTGAAGTAGCTAAGAAGGTTTGGGCTGAAGTTTTCTTCTACCTTGCT
GAGAACAATGTCATGTTTGAGGGTATTCTCCTCAAGCCTAGCATGGTCAC
TCCTGGTGCTGAATGCAAGGAGAAGGCCACACCACAACAGGTTGCTGAGT
ACACACTCAAGCTCCTTCACAGGAGAATCCCTCCAGCTGTCCCCGGAATC
ATGTTCTTGTCTGGTGGGCAATCTGAGGTTGAGGCAACCCTCAACTTGAA
CGCCATGAACCAAGGTCCCAACCCATGGCACGTATCTTTCTCTTATGCCA
GAGCTCTCCAAAACACCTGCCTGAAGACATGGGGTGGCAGGCCAGAGAAT
GTCAAGGCAGCTCAGGATACTCTGCTCACCCGTGCCAAGGCCAACTCACT
TGCTCAGCTC
back to top