FC868950

Overview
NameFC868950
Unique NameFC868950
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length640
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868950 vs. ExPASy Swiss-Prot
Match: PIMT2_ARCFU (Protein-L-isoaspartate O-methyltransferase 2 OS=Archaeoglobus fulgidus GN=pcm2 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.626e-15
Identity = 45/104 (43.27%), Postives = 63/104 (60.58%), Query Frame = 3
Query:  315 SKKVSEVMETIDRACFVPDG--TPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSSRILK 620
            S+KV E +  + R  FVP+      YVD+P+ IGY  TISAPHM A   +LL+  L+ G   L++G+G GY  A  A +VG  G+ + +E+IPEL   +  ILK
Sbjct:   21 SRKVYEAIRKVPRHLFVPESYKNEAYVDTPLPIGYGQTISAPHMVAIMCELLD--LREGDKVLEVGTGCGYHAAVTAEIVGKSGKVISIEYIPELAERARAILK 122          
BLAST of FC868950 vs. ExPASy Swiss-Prot
Match: PIMT_METTH (Protein-L-isoaspartate O-methyltransferase OS=Methanobacterium thermoautotrophicum GN=pcm PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.054e-14
Identity = 47/122 (38.52%), Postives = 69/122 (56.56%), Query Frame = 3
Query:  261 VNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTP--PYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSSRILK 620
            +++ + MV+ L   G I S+ V   ME + R  FVP+      Y+D P+ IG   TISAPHM A   ++L+  L+PGM  L+IG+G GY  A  A ++GP+G    VE I  L   + + L+
Sbjct:    2 MDERRRMVQDLMERGYIKSEAVRRAMERVPREEFVPEDEMHRAYMDMPLPIGEGQTISAPHMVAMIAEILD--LEPGMKVLEIGTGCGYNAAVIAEIIGPEGHLYTVERIGILYERARKKLR 121          
BLAST of FC868950 vs. ExPASy Swiss-Prot
Match: PIMT1_ARCFU (Protein-L-isoaspartate O-methyltransferase 1 OS=Archaeoglobus fulgidus GN=pcm1 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.797e-14
Identity = 47/103 (45.63%), Postives = 62/103 (60.19%), Query Frame = 3
Query:  315 SKKVSEVMETIDRACFVPDG--TPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSSRIL 617
            S+KV   ++ + R  FVP+   T  YVD+P+ IGY  TISAPHM A   +LL+  L+ G   L+IG+G GY  A  A +VG +G  V VE IPEL   + R L
Sbjct:   21 SEKVYNAIKKVPRHLFVPERYRTMAYVDTPLPIGYGQTISAPHMVAIMCELLD--LREGERVLEIGTGCGYHAAVTAEIVGKRGLVVSVERIPELAEIAKRNL 121          
BLAST of FC868950 vs. ExPASy Swiss-Prot
Match: PIMT_META3 (Protein-L-isoaspartate O-methyltransferase OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=pcm PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.347e-14
Identity = 48/123 (39.02%), Postives = 71/123 (57.72%), Query Frame = 3
Query:  261 VNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPY--VDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSSRILKK 623
            + K +A+V+ L + G + +K VS+ + T+ R  F+P     Y  VD+P+ IG+  TISA HM A     L+  LK G   L+IG+G+GY  A  A +VG  G+ + +E IPEL   +   LKK
Sbjct:    3 IKKMEAIVKGLINAGYLKNKMVSKALLTVPRHEFIPAELHDYAYVDTPLNIGHGQTISAIHMVAIICDALD--LKEGDKVLEIGTGSGYHAAVVAEIVGKNGQVITIERIPELAEKAESTLKK 123          
BLAST of FC868950 vs. ExPASy Swiss-Prot
Match: PIMT_IGNH4 (Protein-L-isoaspartate O-methyltransferase OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=pcm PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.347e-14
Identity = 46/120 (38.33%), Postives = 67/120 (55.83%), Query Frame = 3
Query:  267 KNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTP--PYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSSRILK 620
            K + ++ +L   G I  K+V+E M  + R  FVP+      Y D+P+ IG   TISAPHM A  ++  E  L+ G   L++G+G+GY  A  A +VGP+G    +E IPEL   +   LK
Sbjct:    4 KKRELIRNLIAEGYIKRKEVAEAMMKVPRELFVPEELRHMAYEDTPLPIGAGQTISAPHMVAYMVEAAE--LRRGDKVLEVGTGSGYHAAVMAELVGPEGHVYTIERIPELAERARERLK 121          
BLAST of FC868950 vs. ExPASy Swiss-Prot
Match: PIMT_THEM4 (Protein-L-isoaspartate O-methyltransferase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=pcm PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.830e-14
Identity = 47/117 (40.17%), Postives = 65/117 (55.56%), Query Frame = 3
Query:  279 MVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPP--YVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSSRILKK 623
            M EHL+ YGV  SK + E M  IDR  FVP+      Y D P+ IG+  TISAPHM    +   E +LK     L+IG+G+GY  A  +L+VG  G    +E I +L   +++  K+
Sbjct:    1 MYEHLKRYGV--SKNIIEAMNKIDRKYFVPENVKDLAYDDIPLPIGFGQTISAPHMVG--IMCKELDLKEKDKVLEIGTGSGYNAAVMSLLVGKSGHIYTIERIKQLYKIATKRFKQ 113          
BLAST of FC868950 vs. ExPASy Swiss-Prot
Match: PIMT_HYPBU (Protein-L-isoaspartate O-methyltransferase OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=pcm PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.165e-13
Identity = 48/126 (38.10%), Postives = 66/126 (52.38%), Query Frame = 3
Query:  273 KAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTP--PYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQ-------GRAVGVEHIPELVASSSRILKK 623
            + +VE L   G I S+ V   M  + R  FVPD      Y D+P+ IG+  TISAPHM A   +  +  LKPGM  L++G+G+GY  A  A +V P        G    +E IPEL   + R L++
Sbjct:   16 RRLVERLVREGYIRSEHVKRAMLRVPRELFVPDELRHLAYEDTPLPIGHGQTISAPHMVAMMTEYAD--LKPGMKVLEVGAGSGYHAAVMAEVVAPSDEPREHWGHVYTIERIPELAEFARRNLER 139          
BLAST of FC868950 vs. ExPASy Swiss-Prot
Match: PIMT_METBU (Protein-L-isoaspartate O-methyltransferase OS=Methanococcoides burtonii (strain DSM 6242) GN=pcm PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.390e-13
Identity = 44/110 (40.00%), Postives = 62/110 (56.36%), Query Frame = 3
Query:  312 TSKKVSEVMETIDRACFVPDGTPP--YVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSSRILKKCSGS 635
            T ++V   M+ + R  F+P+      Y D+P+ IGY+ TISAPHM A    LL+  +  GM  L+IGSG+GY  A  A + G  G+   VE IPELV  +   L++   S
Sbjct:   10 TDQRVLNAMKKVPRHLFLPEDMQSFAYADTPLPIGYDQTISAPHMVAIMCDLLK--ITEGMTILEIGSGSGYNAAVMAELAGENGKVYTVERIPELVDLARNNLERAGYS 117          
BLAST of FC868950 vs. ExPASy Swiss-Prot
Match: PIMT_PYRHO (Protein-L-isoaspartate O-methyltransferase OS=Pyrococcus horikoshii GN=pcm PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 5.782e-13
Identity = 49/121 (40.50%), Postives = 68/121 (56.20%), Query Frame = 3
Query:  267 KNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPY--VDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSSRILKK 623
            K K  VE L+  G+I S+KV        R  FV D    Y  VD P+ I    TISAPHM A  L++ +  LKPGM+ L++G+G+G+  A  A +V  +G    +E IPELV  + R L++
Sbjct:   10 KWKRTVEMLKAEGIIKSEKVERAFLKCPRYLFVEDRYKKYAHVDEPLPIPAGQTISAPHMVAIMLEIAD--LKPGMNVLEVGTGSGWNAALIAEIV--KGDVYSIERIPELVEFAKRNLER 126          
BLAST of FC868950 vs. ExPASy Swiss-Prot
Match: PIMT_METM7 (Protein-L-isoaspartate O-methyltransferase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=pcm PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.748e-12
Identity = 41/121 (33.88%), Postives = 65/121 (53.72%), Query Frame = 3
Query:  261 VNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPY--VDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSSRIL 617
            +N+   ++ +L   G I  + V + + T+ R  F+P     Y  +DSP+ IGY  TISA HM     + L+  L  G + L++G+G+GY  A  + +VG  G    +E IPEL   S ++L
Sbjct:    3 LNEIVGVIGNLISNGYIKKQSVIDALMTVPRHKFIPKSMEEYAYIDSPLGIGYGQTISAIHMVGIMCEELD--LDVGQNVLEVGTGSGYHAAVVSEIVGESGNVTTIERIPELFEKSKQVL 121          
The following BLAST results are available for this feature:
BLAST of FC868950 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
PIMT2_ARCFU1.626e-1543.27Protein-L-isoaspartate O-methyltransferase 2 OS=Ar... [more]
PIMT_METTH1.054e-1438.52Protein-L-isoaspartate O-methyltransferase OS=Meth... [more]
PIMT1_ARCFU1.797e-1445.63Protein-L-isoaspartate O-methyltransferase 1 OS=Ar... [more]
PIMT_META32.347e-1439.02Protein-L-isoaspartate O-methyltransferase OS=Meth... [more]
PIMT_IGNH42.347e-1438.33Protein-L-isoaspartate O-methyltransferase OS=Igni... [more]
PIMT_THEM46.830e-1440.17Protein-L-isoaspartate O-methyltransferase OS=Ther... [more]
PIMT_HYPBU1.165e-1338.10Protein-L-isoaspartate O-methyltransferase OS=Hype... [more]
PIMT_METBU3.390e-1340.00Protein-L-isoaspartate O-methyltransferase OS=Meth... [more]
PIMT_PYRHO5.782e-1340.50Protein-L-isoaspartate O-methyltransferase OS=Pyro... [more]
PIMT_METM73.748e-1233.88Protein-L-isoaspartate O-methyltransferase OS=Meth... [more]

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Properties
Property NameValue
Genbank descriptionC31006H06EF AbioticL1 Citrus clementina cDNA clone C31006H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868950 ID=FC868950; Name=FC868950; organism=Citrus clementina; type=EST; length=640bp
TTCATCAGTGTGCAGTGATAGCGTATGGTTTCCGCTATTATTATATGCCT
GGTTTAAAGCACATATTATCAACCTTCACTCTTATCCCTCACCGTCATCG
CTGTTCTTACTTACCATCACCATCACCATCACCGTCACTTGTCTCTTTGT
CTTCTTCTTTTCATCTTCCAAATCCAGATAACCTCAGTCGTTTCCTCACG
GGTAACCTCACGGGTAACTGTCCCTTTTTCAAGATGGAGAGATACTGGAG
TGGAAGTGGTGTCAACAAGAATAAAGCGATGGTGGAGCATTTGCAGCATT
ATGGAGTGATTACATCAAAAAAGGTATCTGAAGTAATGGAAACTATTGAT
CGGGCTTGCTTTGTGCCAGATGGTACTCCACCTTATGTTGACAGCCCAAT
GGCAATAGGTTACAATGCCACTATTTCAGCACCTCATATGCATGCAACAT
GCCTTCAATTATTGGAGGAGAATCTGAAACCTGGCATGCACGCTTTGGAT
ATTGGTTCTGGAACTGGATATTTGACAGCGTGCTTTGCCTTGATGGTTGG
ACCACAAGGTCGTGCTGTGGGTGTCGAGCACATTCCTGAGTTGGTGGCTT
CATCATCCAGAATATTGAAAAAGTGCAGCGGCTCCATTGC
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