FC868950

Overview
NameFC868950
Unique NameFC868950
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length640
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868950 vs. ExPASy Swiss-Prot
Match: PIMT1_METAC (Protein-L-isoaspartate O-methyltransferase 1 OS=Methanosarcina acetivorans GN=pcm1 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.349e-12
Identity = 43/104 (41.35%), Postives = 57/104 (54.81%), Query Frame = 3
Query:  318 KKVSEVMETIDRACFVPDGTPP--YVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSSRILKK 623
            +KV + M  + R  FVP+      Y+D+P+ IG+  TISAPHM A    LLE  L  G+  L+IG+G+GY  A    +VG  G    VE I  LV  +   LKK
Sbjct:   60 EKVLKAMLRVPRHLFVPEYAKKGAYIDTPLEIGFGQTISAPHMVAIMCDLLE--LSEGLKVLEIGAGSGYNAAVMGELVGKSGHVYTVERIEPLVDFARENLKK 161          
BLAST of FC868950 vs. ExPASy Swiss-Prot
Match: PIMT_METM6 (Protein-L-isoaspartate O-methyltransferase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=pcm PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.090e-11
Identity = 41/123 (33.33%), Postives = 67/123 (54.47%), Query Frame = 3
Query:  261 VNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPY--VDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSSRILKK 623
            +N+   +V +L   G I  + V + + ++ R  F+P     Y  +DSP+ IG   TISA HM     + L+ N+  G + L++G+G+GY  A  + +VG  G+   VE IPEL   S ++L +
Sbjct:    3 LNEIVGVVGNLISKGYIKKQSVIDALMSVPRHKFLPKNMEEYAYIDSPLGIGCGQTISAIHMVGIMCEELDLNM--GQNVLEVGTGSGYQAAVVSKIVGESGKVTTVERIPELFEKSKQVLSE 123          
BLAST of FC868950 vs. ExPASy Swiss-Prot
Match: PIMT_STAMF (Protein-L-isoaspartate O-methyltransferase OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=pcm PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.424e-11
Identity = 44/127 (34.65%), Postives = 69/127 (54.33%), Query Frame = 3
Query:  264 NKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPY--VDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQ-----GRAVGVEHIPELVASSSRILKK 623
            N+ + ++++L+  G+I S KV   + ++ R  FVP     Y  +D P+ IG+  TISA HM A   + L+   +PG   L+IG+G+GY  A  A +V  Q     G    VE IPEL   + + L++
Sbjct:    7 NERRRVIDYLRRIGIIRSDKVYRALLSVPREEFVPPQYREYAYIDEPLPIGFGQTISAIHMVAIMTEELDP--EPGNIVLEIGTGSGYQAAVLAEIVAKQDPNRRGHVYTVERIPELAEFAKKNLER 131          
BLAST of FC868950 vs. ExPASy Swiss-Prot
Match: PIMT_PYRAE (Protein-L-isoaspartate O-methyltransferase OS=Pyrobaculum aerophilum GN=pcm PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.424e-11
Identity = 42/119 (35.29%), Postives = 69/119 (57.98%), Query Frame = 3
Query:  273 KAMVEHLQHYGVITSKKVSEVMETIDRACFV-PD-GTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSSRILKK 623
            K +VE L+  G++ S++V   + T+ R  FV P+     Y D P+ +   ATISAPHM A   +L+E   +PGM  L++G+G+GY  A  A  +  +GR   +E + EL   +++ L++
Sbjct:    3 KRLVEELERDGIVKSERVKRALLTVPREEFVLPEYRMMAYEDRPLPLFAGATISAPHMVAMMCELIEP--RPGMKILEVGTGSGYHAAVCAEAIEKKGRIYTIEIVKELAVFAAQNLER 119          
BLAST of FC868950 vs. ExPASy Swiss-Prot
Match: PIMT_METMA (Protein-L-isoaspartate O-methyltransferase OS=Methanosarcina mazei GN=pcm PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.424e-11
Identity = 45/119 (37.82%), Postives = 65/119 (54.62%), Query Frame = 3
Query:  273 KAMVEHLQHYGVITSKKVSEVMETIDRACFVPD--GTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSSRILKK 623
            K +VE L+  G +  +KV + M  + R  FVP+      YVD P+ IG+  TISAPHM A   ++LE  L  G   L+IG+G+GY  A  + +VG  G    VE +  L   + + LK+
Sbjct:   36 KLLVEGLE--GFVIDEKVLQAMLRVPRHRFVPEYEQRAAYVDMPLEIGHGQTISAPHMVAMMCEILE--LAEGHKVLEIGAGSGYNAAVMSELVGKTGHIYTVERVEPLANFAKKNLKE 150          
BLAST of FC868950 vs. ExPASy Swiss-Prot
Match: PIMT_METMP (Protein-L-isoaspartate O-methyltransferase OS=Methanococcus maripaludis GN=pcm PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.860e-11
Identity = 41/123 (33.33%), Postives = 67/123 (54.47%), Query Frame = 3
Query:  261 VNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPY--VDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSSRILKK 623
            +N+   ++E+L   G I  + V + + ++ R  F+      Y  VDSP+ IGY  TISA HM     + L+  L  G + L++G+G+GY  A  + +VG  G+   +E IPEL  +S + L +
Sbjct:    3 LNEIIPVIENLISRGYIKKQSVIDAILSVPRHKFISKSMESYAYVDSPLEIGYGQTISAIHMVGIMCEELD--LDEGQNVLEVGTGSGYHAAVVSKIVGESGKVTTIERIPELFENSKKTLSE 123          
BLAST of FC868950 vs. ExPASy Swiss-Prot
Match: PIMT_UNCMA (Protein-L-isoaspartate O-methyltransferase OS=Uncultured methanogenic archaeon RC-I GN=pcm PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.173e-11
Identity = 39/98 (39.80%), Postives = 55/98 (56.12%), Query Frame = 3
Query:  336 METIDRACFVPDGTPP--YVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSSRILKK 623
            M+ + R  FVP+   P  Y D+P+ IG+N TISAP M A   Q L+  ++ G   L+IG+G GY  A  A++ G  G    VE IPEL   +  +L +
Sbjct:    1 MDRVPREEFVPEDVRPDAYYDTPLPIGHNQTISAPSMVAIMCQALD--IREGNKVLEIGTGLGYHAAVMAVLAGASGVVYTVERIPELADMARSVLSR 96          
BLAST of FC868950 vs. ExPASy Swiss-Prot
Match: PIMT_PYRFU (Protein-L-isoaspartate O-methyltransferase OS=Pyrococcus furiosus GN=pcm PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 4.144e-11
Identity = 44/116 (37.93%), Postives = 65/116 (56.03%), Query Frame = 3
Query:  282 VEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPY--VDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSSRILKK 623
            VE L+  G+I SK+V        R  FV D    Y  +D P+ I    T+SAPHM A  L++   NLKPGM+ L++G+G+G+  A  + +V  +     +E IPELV  + R L++
Sbjct:   15 VEMLKAEGIIRSKEVERAFLKYPRYLFVEDKYKKYAHIDEPLPIPAGQTVSAPHMVAIMLEIA--NLKPGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLER 126          
BLAST of FC868950 vs. ExPASy Swiss-Prot
Match: PIMT_METM5 (Protein-L-isoaspartate O-methyltransferase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=pcm PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.068e-11
Identity = 39/123 (31.71%), Postives = 66/123 (53.66%), Query Frame = 3
Query:  261 VNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPY--VDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSSRILKK 623
            +N+   ++ +L   G I  + V + + ++ R  F+P     Y  +DSP+ IG   TISA HM     + L+  L  G + L++G+G+GY  A  + +VG  G+   +E IPEL   S ++L +
Sbjct:    3 LNEIIGVIGNLISKGYIQKQSVIDALMSVPRHKFIPKAMEEYAYIDSPLGIGCGQTISAIHMVGIMCEELD--LDVGQNVLEVGTGSGYHAAVVSEIVGESGKVTTIERIPELFEKSKQVLSE 123          
The following BLAST results are available for this feature:
BLAST of FC868950 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
PIMT1_METAC8.349e-1241.35Protein-L-isoaspartate O-methyltransferase 1 OS=Me... [more]
PIMT_METM61.090e-1133.33Protein-L-isoaspartate O-methyltransferase OS=Meth... [more]
PIMT_STAMF1.424e-1134.65Protein-L-isoaspartate O-methyltransferase OS=Stap... [more]
PIMT_PYRAE1.424e-1135.29Protein-L-isoaspartate O-methyltransferase OS=Pyro... [more]
PIMT_METMA1.424e-1137.82Protein-L-isoaspartate O-methyltransferase OS=Meth... [more]
PIMT_METMP1.860e-1133.33Protein-L-isoaspartate O-methyltransferase OS=Meth... [more]
PIMT_UNCMA3.173e-1139.80Protein-L-isoaspartate O-methyltransferase OS=Uncu... [more]
PIMT_PYRFU4.144e-1137.93Protein-L-isoaspartate O-methyltransferase OS=Pyro... [more]
PIMT_METM57.068e-1131.71Protein-L-isoaspartate O-methyltransferase OS=Meth... [more]

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Properties
Property NameValue
Genbank descriptionC31006H06EF AbioticL1 Citrus clementina cDNA clone C31006H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868950 ID=FC868950; Name=FC868950; organism=Citrus clementina; type=EST; length=640bp
TTCATCAGTGTGCAGTGATAGCGTATGGTTTCCGCTATTATTATATGCCT
GGTTTAAAGCACATATTATCAACCTTCACTCTTATCCCTCACCGTCATCG
CTGTTCTTACTTACCATCACCATCACCATCACCGTCACTTGTCTCTTTGT
CTTCTTCTTTTCATCTTCCAAATCCAGATAACCTCAGTCGTTTCCTCACG
GGTAACCTCACGGGTAACTGTCCCTTTTTCAAGATGGAGAGATACTGGAG
TGGAAGTGGTGTCAACAAGAATAAAGCGATGGTGGAGCATTTGCAGCATT
ATGGAGTGATTACATCAAAAAAGGTATCTGAAGTAATGGAAACTATTGAT
CGGGCTTGCTTTGTGCCAGATGGTACTCCACCTTATGTTGACAGCCCAAT
GGCAATAGGTTACAATGCCACTATTTCAGCACCTCATATGCATGCAACAT
GCCTTCAATTATTGGAGGAGAATCTGAAACCTGGCATGCACGCTTTGGAT
ATTGGTTCTGGAACTGGATATTTGACAGCGTGCTTTGCCTTGATGGTTGG
ACCACAAGGTCGTGCTGTGGGTGTCGAGCACATTCCTGAGTTGGTGGCTT
CATCATCCAGAATATTGAAAAAGTGCAGCGGCTCCATTGC
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