FC868959

Overview
NameFC868959
Unique NameFC868959
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868959 vs. ExPASy Swiss-Prot
Match: CP26A_DANRE (Cytochrome P450 26A1 OS=Danio rerio GN=cyp26a1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.645e-11
Identity = 59/226 (26.11%), Postives = 100/226 (44.25%), Query Frame = 1
Query:   43 IFSLCIAFALLFVFFYPLIIT-VKLKE-----KIYPNPH--LPPGNLGWPVIGETLGFIRAGFEGKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTWWPSSVSKLFKTCLLTKAGDDAKRMRRTMMMSFLSPNALMKYVERIDMITQQHIATYWEGKEEVKVHPTVKLYTFELACHLLASVEDPSLIS---KLASHFNIFXQGVMSFP 687
            +++L + F    V    L +  VKL E     ++ PN    LPPG +G P IGETL  I      +  +F+R + +KY   ++KT L G   +   G    + +   E+KLV   WP+SV  +  +  L+       + ++  +M   S +AL  Y+  I    +  I  + +    V V+P +K   F +A  +L   E   + +   +L   F    + + S P
Sbjct:    3 LYTLMVTFLCTIVLPVLLFLAAVKLWEMLMIRRVDPNCRSPLPPGTMGLPFIGETLQLIL-----QRRKFLRMKRQKYGC-IYKTHLFGNPTVRVMGADNVRQILLGEHKLVSVQWPASVRTILGSDTLSNVHGVQHKNKKKAIMRAFSRDALEHYIPVIQQEVKSAIQEWLQKDSCVLVYPEMKKLMFRIAMRILLGFEPEQIKTDEQELVEAFEEMIKNLFSLP 222          
BLAST of FC868959 vs. ExPASy Swiss-Prot
Match: ABAH4_ARATH (Abscisic acid 8'-hydroxylase 4 OS=Arabidopsis thaliana GN=CYP707A4 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.665e-11
Identity = 51/216 (23.61%), Postives = 93/216 (43.06%), Query Frame = 1
Query:   43 IFSLCIAFALLFVFFYPLIITVKLKEKIYPNPHLPPGNLGWPVIGETLGFIRAGFEGKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTWWPSSVSKLF-KTCLLTKAGDDAKRMRRTMMMSFLSPNALMKYVERIDMITQQHIATYWEGKEEVKVHPTVKLYTFELACHLLASVEDPSLISKLASHFNIFXQGVMSFP 687
            I+ L +   +L +    +I++ K K        LPPG++GWP +GETL      +   P  F   + ++Y   +FKT +LG   ++       + +      + +  +P S  KL   + L    GD    +R+ +  SF  P  + K +  I+ I    + + W     V  +  +K + F++    +    + S    L  ++NI  +G  SFP
Sbjct:    4 IWFLVVPILILCLLLVRVIVSKKKKNS---RGKLPPGSMGWPYLGETLQL----YSQNPNVFFTSKQKRY-GEIFKTRILGYPCVMLASPEAARFVLVTHAHMFKPTYPRSKEKLIGPSALFFHQGDYHSHIRKLVQSSFY-PETIRKLIPDIEHIALSSLQS-WANMPIVSTYQEMKKFAFDVGILAIFGHLESSYKEILKHNYNIVDKGYNSFP 209          
BLAST of FC868959 vs. ExPASy Swiss-Prot
Match: CP26A_MOUSE (Cytochrome P450 26A1 OS=Mus musculus GN=Cyp26a1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.787e-11
Identity = 45/163 (27.61%), Postives = 77/163 (47.24%), Query Frame = 1
Query:  142 LPPGNLGWPVIGETLGFIRAGFEGKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTWWPSSVSKLFKTCLLTKAGDDAKRMRRTMMMSFLSPNALMKYV----ERIDMITQQHIATYWEGKEEVKVHPTVKLYTFELACHLLASVE 618
            LPPG +G+P  GETL  +      +  +F++ +  KY   ++KT L G   +   G    + +   E++LV   WP+SV  +     L+   D + + R+ ++M   S  AL  YV    E +    +Q ++    G+  + V+P VK   F +A  +L   E
Sbjct:   44 LPPGTMGFPFFGETLQMVL-----QRRKFLQMKRRKYGF-IYKTHLFGRPTVRVMGADNVRRILLGEHRLVSVHWPASVRTILGAGCLSNLHDSSHKQRKKVIMQAFSREALQCYVLVIAEEVSSCLEQWLSC---GERGLLVYPEVKRLMFRIAMRILLGCE 197          
BLAST of FC868959 vs. ExPASy Swiss-Prot
Match: KAO2_ARATH (Ent-kaurenoic acid oxidase 2 OS=Arabidopsis thaliana GN=KAO2 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.252e-11
Identity = 49/195 (25.13%), Postives = 89/195 (45.64%), Query Frame = 1
Query:   97 IITVKLKEKIYPNPHLPPGNLGWPVIGETLGFIRAGFEGKPERFIRERMEKYD-SRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTWWPSSVSKLF-KTCLLTKAGDDAKRMRRTMMMSFLSPNALMKYVERIDMITQQHIATYWEGKEEVKVHPTVKLYTFELACHLLASVEDPSLISKLASHFNIFXQGV 675
            I   KL EK +   +LPPG+LGWPVIG    F+RA     PE FI+  + +Y  + ++K  + G   ++       + + ++++      WP S  KL  +   +  + ++ KR+RR        P AL  Y++ I+      +   W    E++    ++  TF++  ++  S E   ++  L   +     GV
Sbjct:   32 IYVSKLGEKKH---YLPPGDLGWPVIGNMWSFLRAFKTSDPESFIQSYITRYGRTGIYKAHMFGYPCVLVTTPETCRRVLTDDDAF-HIGWPKSTMKLIGRKSFVGISFEEHKRLRRLTSAPVNGPEALSVYIQFIEETVNTDLEK-WSKMGEIEFLSHLRKLTFKVIMYIFLSSESEHVMDSLEREYTNLNYGV 221          
BLAST of FC868959 vs. ExPASy Swiss-Prot
Match: C85A2_ARATH (Cytochrome P450 85A2 OS=Arabidopsis thaliana GN=CYP85A2 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.165e-11
Identity = 46/188 (24.47%), Postives = 86/188 (45.74%), Query Frame = 1
Query:  127 YPNPHLPPGNLGWPVIGETLGFIRAGFEGKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTWWPSSVSKLFKTCLLTKAGDDAKRMRRTMMMSFLSPNALMKY-VERIDMITQQHIATYWEGKEEVKVHPTVKLYTFELACHLLASVEDPSLISKLASHFNIFXQGVMSFP 687
            Y    LPPG +GWP+ GET  F++ G +     F++ +  +Y S  FK+ +LG   IV      ++ +  NE+K +   +P S+  +  TC +      + R+ R  ++S +SP  +  + + +ID   + ++   W+  E V +    K   F  +   +A       + +  + F     G +S P
Sbjct:   29 YSKKGLPPGTMGWPIFGETTEFLKQGPD-----FMKNQRLRYGS-FFKSHILGCPTIVSMDAELNRYILMNESKGLVAGYPQSMLDILGTCNIAAVHGPSHRLMRGSLLSLISPTMMKDHLLPKIDDFMRNYLCG-WDDLETVDIQEKTKHMAFLSSLLQIAETLKKPEVEEYRTEFFKLVVGTLSVP 209          
The following BLAST results are available for this feature:
BLAST of FC868959 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
CP26A_DANRE1.645e-1126.11Cytochrome P450 26A1 OS=Danio rerio GN=cyp26a1 PE=... [more]
ABAH4_ARATH3.665e-1123.61Abscisic acid 8'-hydroxylase 4 OS=Arabidopsis thal... [more]
CP26A_MOUSE4.787e-1127.61Cytochrome P450 26A1 OS=Mus musculus GN=Cyp26a1 PE... [more]
KAO2_ARATH6.252e-1125.13Ent-kaurenoic acid oxidase 2 OS=Arabidopsis thalia... [more]
C85A2_ARATH8.165e-1124.47Cytochrome P450 85A2 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionC31007A05EF AbioticL1 Citrus clementina cDNA clone C31007A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868959 ID=FC868959; Name=FC868959; organism=Citrus clementina; type=EST; length=688bp
AAATTCCTTCTTCCTCATTTCATGCATGATATGGAGTTTACCATCTTCTC
GTTGTGTATAGCTTTTGCTTTACTCTTTGTCTTCTTCTATCCACTAATTA
TCACCGTAAAACTCAAAGAAAAAATATACCCAAATCCTCATCTTCCTCCG
GGGAACCTCGGATGGCCTGTTATCGGGGAAACCCTGGGGTTTATTCGAGC
AGGCTTCGAAGGAAAACCGGAGAGGTTCATAAGAGAAAGAATGGAGAAAT
ATGACTCCAGGGTTTTCAAGACGTGCTTGCTTGGAGAAGATATGATAGTG
TTTTGTGGCACGGCCGGGCACAAGTTGTTGTTTAGCAATGAGAACAAGTT
GGTGAGAACATGGTGGCCGAGCTCCGTCAGTAAATTGTTCAAGACTTGTT
TGCTAACGAAAGCTGGCGATGATGCCAAAAGGATGAGGAGGACGATGATG
ATGAGCTTTCTAAGTCCAAATGCGTTGATGAAGTATGTTGAAAGAATCGA
TATGATCACACAACAACACATTGCTACATATTGGGAAGGAAAAGAGGAGG
TGAAAGTCCATCCTACGGTGAAACTATACACTTTTGAATTGGCTTGTCAC
TTACTTGCAAGTGTTGAAGACCCTTCACTCATTTCCAAGCTGGCTTCTCA
TTTCAATATTTTTCNTCAAGGGGTGATGTCTTTTCCCG
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