FC868968
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACTA_BOVIN (Actin, aortic smooth muscle OS=Bos taurus GN=ACTA2 PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.472e-20 Identity = 72/189 (38.10%), Postives = 90/189 (47.62%), Query Frame = 1 Query: 85 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 A V D GS L KAG A D AP V PS + R G + V D P+ G I +WD ME + HH Y L +L PL +PKA RE++ Q+MFETFN+ Y + QAVLSLYA GR +G +D G G P+ EG A R ++ G DLT L + L Sbjct: 9 ALVCDNGSGLCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPL-NPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKIL 195
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT3_PODCA (Actin-3 OS=Podocoryne carnea GN=ACT3 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.472e-20 Identity = 70/189 (37.04%), Postives = 91/189 (48.15%), Query Frame = 1 Query: 85 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 A VVD GS + KAG A D AP V PS + R G + V D P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+MFETFN Y + QAVLSLYA GR +G +D G G P+ EG A R ++ G DLT + + L Sbjct: 8 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIIRLDLAGRDLTDYMMKIL 194
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT2_NAEFO (Actin-2 (Fragment) OS=Naegleria fowleri PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.472e-20 Identity = 70/199 (35.18%), Postives = 96/199 (48.24%), Query Frame = 1 Query: 79 MEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQELGKTNPSVN 642 ++A VD GS + KAG A D AP V PS + R + + V D P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+MFETF++ Y + QAVLSLYA GR +G +D G G P+ EG A R ++ G DLT L ++ T S N Sbjct: 1 VQALEVDNGSGMCKAGFA-GDDAPGAVFPSIIGRPKQKSIMVGMGNKDAYVGDEVQSKRGILIFKYPIQHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFSVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLIEDSHGTCYSFN 197
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT1_PODCA (Actin-1/2 OS=Podocoryne carnea GN=ACTIA PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.472e-20 Identity = 70/189 (37.04%), Postives = 91/189 (48.15%), Query Frame = 1 Query: 85 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 A VVD GS + KAG A D AP V PS + R G + V D P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+MFETFN Y + QAVLSLYA GR +G +D G G P+ EG A R ++ G DLT + + L Sbjct: 8 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIIRLDLAGRDLTDYMMKIL 194
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT1_ECHGR (Actin-1 OS=Echinococcus granulosus GN=ACTI PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.472e-20 Identity = 68/187 (36.36%), Postives = 92/187 (49.20%), Query Frame = 1 Query: 91 VVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 VVD GS + KAG A D +P V PS + R + + + V D P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+MFETFN+ Y + QAVLSLYA GR +G +D G G P+ EG A R ++ G DLT L + L Sbjct: 9 VVDNGSGMCKAGFA-GDDSPRAVFPSLVGRPRQQSIMVGMGNKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFNVRAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDWLTKLL 193
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT18_DICDI (Actin-18 OS=Dictyostelium discoideum GN=act18 PE=3 SV=3) HSP 1 Score: 99.7525 bits (247), Expect = 1.472e-20 Identity = 71/216 (32.87%), Postives = 105/216 (48.61%), Query Frame = 1 Query: 76 KMEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGSSSV--DNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQELGKTNPSVNLSLYD--VEKLKEQFS 684 +++A V+D GS + KAG A D AP V S + R G V + + D P+ RG + +WD ME++ HH Y LG E +L T+ +PK RE++ Q+MFETFN Y + QAVLSLY+ GR +G +D G G + EG A R ++ G DL+ + + L K S + ++ +KE+ S Sbjct: 5 EVQAIVIDNGSDMCKAGFA-GDDAPRAVFQSIVGRPRYTGVMDVMGQKDSYIGDEAHSRKGFLTLKYPIERGIVTNWDDMEEIWHHTFYNELGVAP-EEHPVLLTEQPLNPKKNREKMTQIMFETFNTPAMYVAIQAVLSLYSSGRTTGIVMDSGDGVSHAVSIYEGHALPHAILRLDLAGRDLSDYMMKILTKRGYSFTTTAEKEIIKDIKEKLS 218
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT_PHYME (Actin OS=Phytophthora megasperma PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.922e-20 Identity = 68/191 (35.60%), Postives = 93/191 (48.69%), Query Frame = 1 Query: 79 MEAAVVDAGSKLLKAGPAIPDQAPSMVIPS--QMKRVLEDGSSSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 ++A V+D GS + KAG A D AP V PS M + L + D P+ G + +WD ME + H Y L E +L T+ +PKA RE++ Q+MFETFN+ Y + QAVLSLYA GR +GC +D G G P+ EG A R ++ G DLT + + L Sbjct: 5 IQAVVIDNGSGMCKAGFA-GDDAPRAVFPSIVGMPKHLGIMVGMNQKDAYIGDEAQAKRGVLTLRYPIEHGIVTNWDDMEKIWSHTFYNELRVAP-EEHPVLLTEAPLNPKANRERMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGCVLDSGDGVSHTVPIYEGYALPHAIVRLDLAGRDLTDYMMKIL 193
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT_ENTHI (Actin OS=Entamoeba histolytica PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.922e-20 Identity = 70/192 (36.46%), Postives = 92/192 (47.92%), Query Frame = 1 Query: 76 KMEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDG--SSSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 +++A VVD GS + KAG A D AP V PS + R + V D P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+MFETFN Y QAVLSLYA GR +G +D G G P+ EG A R ++ G DLT L + L Sbjct: 5 EVQALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHVSVMAGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPMNPKANREKMTQIMFETFNTPAMYVGIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKIL 194
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT_CHOCR (Actin OS=Chondrus crispus GN=AC PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.922e-20 Identity = 74/211 (35.07%), Postives = 103/211 (48.82%), Query Frame = 1 Query: 85 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQELGKTNPSVNLS--LYDVEKLKEQ 678 A V+D GS K G A D P V P+ + + + G + V D M P+ G + +WD ME + H Y+ L + E +L T+ +PKA RE++ Q+MFE+FNI FY + QAVLSLYA GR SG +D G G P+ EG A R ++ G DLT +A+ L + S S L V +K+Q Sbjct: 5 AVVIDNGSGRCKTGIAGED-CPKAVFPAVIGKPKQKGIMVGTGQKDEYVGDAAMARRGVLIIKYPLEHGIVTNWDDMEKIWSHAFYSELRVDP-QEHPVLLTEAPLNPKANRERMTQIMFESFNIPAFYVAIQAVLSLYASGRTSGIVLDSGDGVTHTVPIYEGYSLPHAVLRIDLAGRDLTGWMAKLLMQRGYSFTTSAELEIVRDVKQQ 213
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACTS_ATRMM (Actin, alpha skeletal muscle OS=Atractaspis microlepidota microlepidota GN=ACTA1 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.922e-20 Identity = 71/189 (37.57%), Postives = 90/189 (47.62%), Query Frame = 1 Query: 85 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 A V D GS L+KAG A D AP V PS + R G + V D P+ G I +WD ME + HH Y L +L PL +PKA RE++ Q+MFETFN+ Y + QAVL LYA GR +G +D G G P+ EG A R ++ G DLT L + L Sbjct: 9 ALVCDNGSGLVKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPL-NPKANREKMTQIMFETFNVPAMYVAIQAVLPLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKIL 195 The following BLAST results are available for this feature:
BLAST of FC868968 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 422
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868968 ID=FC868968; Name=FC868968; organism=Citrus clementina; type=EST; length=684bpback to top |