FC868968
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACTC_BRALA (Actin, cytoplasmic OS=Branchiostoma lanceolatum PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.922e-20 Identity = 71/189 (37.57%), Postives = 90/189 (47.62%), Query Frame = 1 Query: 85 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 A VVD GS + KAG A D AP V PS + R G + V D PV G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+MFETFN Y + QAVLSLYA GR +G +D G G P+ EG A R ++ G D T L + L Sbjct: 7 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPVEHGIVTNWDDMEKIWHHTFYNELRIAP-EENPLLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDQTDYLMKIL 193
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT3_DIPDE (Actin-3 OS=Diphyllobothrium dendriticum GN=ACT3 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.922e-20 Identity = 69/189 (36.51%), Postives = 91/189 (48.15%), Query Frame = 1 Query: 85 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 A V+D GS + KAG A D AP V PS + R G + V D P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q++FETFN Y + QAVLSLYA GR +G +D G G P+ EG A R ++ G DLT L + L Sbjct: 9 ALVIDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIVFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDMAGRDLTDYLMKIL 195
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT2_PLAFX (Actin-2 OS=Plasmodium falciparum (isolate HB3) PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.922e-20 Identity = 66/182 (36.26%), Postives = 92/182 (50.55%), Query Frame = 1 Query: 85 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRV--------LEDGSSSVDNSTLVEDVTMD---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLT 597 A VVD GS ++K+G A D AP V PS + R +E V + + + P+ G + +WD ME + HH Y L E +L T+ +PK RE++ Q+MFETF++ Y S QA+LSLYA GR +G +D G G P+ EG V A R ++ G DLT Sbjct: 7 ALVVDNGSGMVKSGLA-GDDAPKCVFPSIVGRPKMPNIMIGMEQKECYVGDEAQNKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVSP-EEHPVLLTEAPLNPKTNREKMTQIMFETFDVPAMYVSIQAILSLYASGRTTGIVLDSGDGVSHTVPIYEGYVLPHAINRIDMAGRDLT 186
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT2_PLAFO (Actin-2 OS=Plasmodium falciparum (isolate NF54) PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.922e-20 Identity = 66/182 (36.26%), Postives = 92/182 (50.55%), Query Frame = 1 Query: 85 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRV--------LEDGSSSVDNSTLVEDVTMD---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLT 597 A VVD GS ++K+G A D AP V PS + R +E V + + + P+ G + +WD ME + HH Y L E +L T+ +PK RE++ Q+MFETF++ Y S QA+LSLYA GR +G +D G G P+ EG V A R ++ G DLT Sbjct: 7 ALVVDNGSGMVKSGLA-GDDAPKCVFPSIVGRPKMPNIMIGMEQKECYVGDEAQNKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVSP-EEHPVLLTEAPLNPKTNREKMTQIMFETFDVPAMYVSIQAILSLYASGRTTGIVLDSGDGVSHTVPIYEGYVLPHAINRIDMAGRDLT 186
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT2_PLAF7 (Actin-2 OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0124 PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.922e-20 Identity = 66/182 (36.26%), Postives = 92/182 (50.55%), Query Frame = 1 Query: 85 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRV--------LEDGSSSVDNSTLVEDVTMD---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLT 597 A VVD GS ++K+G A D AP V PS + R +E V + + + P+ G + +WD ME + HH Y L E +L T+ +PK RE++ Q+MFETF++ Y S QA+LSLYA GR +G +D G G P+ EG V A R ++ G DLT Sbjct: 7 ALVVDNGSGMVKSGLA-GDDAPKCVFPSIVGRPKMPNIMIGMEQKECYVGDEAQNKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVSP-EEHPVLLTEAPLNPKTNREKMTQIMFETFDVPAMYVSIQAILSLYASGRTTGIVLDSGDGVSHTVPIYEGYVLPHAINRIDMAGRDLT 186
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT2_PHYIN (Actin-2 OS=Phytophthora infestans GN=ACTB PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.922e-20 Identity = 68/191 (35.60%), Postives = 93/191 (48.69%), Query Frame = 1 Query: 79 MEAAVVDAGSKLLKAGPAIPDQAPSMVIPS--QMKRVLEDGSSSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 ++A V+D GS + KAG A D AP V PS M + L + D P+ G + +WD ME + H Y L E +L T+ +PKA RE++ Q+MFETFN+ Y + QAVLSLYA GR +GC +D G G P+ EG A R ++ G DLT + + L Sbjct: 5 IQAVVIDNGSGMCKAGFA-GDDAPRAVFPSIVGMPKHLGIMVGMNQKDAYIGDEAQAKRGVLTLRYPIEHGIVTNWDDMEKIWSHTFYNELRVAP-EEHPVLLTEAPLNPKANRERMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGCVLDSGDGVSHTVPIYEGYALPHAIVRLDLAGRDLTDYMMKIL 193
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT_GIALA (Actin OS=Giardia lamblia PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.510e-20 Identity = 70/201 (34.83%), Postives = 98/201 (48.76%), Query Frame = 1 Query: 85 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGSSSVDNSTLVEDVTMD-------------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQELGKTNPSVNLS 648 A V+D GS + KAG A D AP V P+ + R + + + ST E+ D P+ G I+DWD ME + HH + L + + +L T+ +PKA RE++ Q+MFETF + FY QAVL+LY+ GR +G +D G G PV EG A R E+ G +LT L + S S Sbjct: 7 AIVIDNGSGMCKAGFA-GDDAPRAVFPTVVGRPKRE--TVLVGSTHKEEYIGDEALAKRGVLKLSYPIEHGQIKDWDMMEKVWHHCYFNELRAQPSDHA-VLLTEAPKNPKANREKICQIMFETFAVPAFYVQVQAVLALYSSGRTTGIVIDTGDGVTHTVPVYEGYSLPHAVLRSEIAGKELTDFCQINLQENGASFTTS 203
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT3_DICDI (Actin-3 OS=Dictyostelium discoideum GN=act3 PE=3 SV=3) HSP 1 Score: 98.9821 bits (245), Expect = 2.510e-20 Identity = 68/191 (35.60%), Postives = 93/191 (48.69%), Query Frame = 1 Query: 79 MEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 ++A V+D GS + KAG A D AP V PS + R G + + D P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+MFETFN Y + QAVLSLYA GR +G +D G G P+ EG A R ++ G DLT + + L Sbjct: 6 VQALVIDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRYTGVMVGMGQKDSYIGDEAQSRKGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYSLPHAILRLDLAGRDLTDYMMKIL 194
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT7_ARATH (Actin-7 OS=Arabidopsis thaliana GN=ACT7 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.279e-20 Identity = 68/191 (35.60%), Postives = 92/191 (48.17%), Query Frame = 1 Query: 79 MEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 ++ V D G+ ++KAG A D AP V PS + R G V D P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+MFETFN+ Y + QAVLSLYA GR +G +D G G P+ EG A R ++ G DLT L + L Sbjct: 7 IQPLVCDNGTGMVKAGFA-GDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKIL 195
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT6_SOLTU (Actin-71 OS=Solanum tuberosum GN=AC71 PE=3 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 3.279e-20 Identity = 67/194 (34.54%), Postives = 96/194 (49.48%), Query Frame = 1 Query: 70 VSKMEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDG---SSSVDNSTLVEDVTMD--------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 V ++ V D G+ ++KAG A D AP V PS + R G ++ +V++ P G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+MFETFN Y + QAVLSLYA GR +G +D G G P+ EG A R ++ G DLT+ + + L Sbjct: 4 VEDIQPLVCDNGTGMVKAGFA-GDDAPRAVFPSIVGRPRHAGVMVGMGQKDAYVVDEAQSKRGILTLKYPXEHGIVNNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTEYMVKIL 195 The following BLAST results are available for this feature:
BLAST of FC868968 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 422
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868968 ID=FC868968; Name=FC868968; organism=Citrus clementina; type=EST; length=684bpback to top |