FC868968
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT3_ORYSJ (Actin-3 OS=Oryza sativa subsp. japonica GN=ACT3 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.279e-20 Identity = 69/191 (36.13%), Postives = 91/191 (47.64%), Query Frame = 1 Query: 79 MEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 ++ V D G+ ++KAG A D AP V PS + R G V D P+ G + +WD ME + HH Y L E IL T+ +PKA RE++ Q+MFETFN Y + QAVLSLYA GR +G +D G G P+ EG A R ++ G DLT L + L Sbjct: 7 IQPLVCDNGTGMVKAGFA-GDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAP-EEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDCLMKIL 195
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT3_ORYSI (Actin-3 OS=Oryza sativa subsp. indica GN=ACT3 PE=2 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 3.279e-20 Identity = 69/191 (36.13%), Postives = 91/191 (47.64%), Query Frame = 1 Query: 79 MEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 ++ V D G+ ++KAG A D AP V PS + R G V D P+ G + +WD ME + HH Y L E IL T+ +PKA RE++ Q+MFETFN Y + QAVLSLYA GR +G +D G G P+ EG A R ++ G DLT L + L Sbjct: 7 IQPLVCDNGTGMVKAGFA-GDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAP-EEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDCLMKIL 195
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT2_ARTSX (Actin, clone 211 OS=Artemia sp. PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.279e-20 Identity = 71/189 (37.57%), Postives = 90/189 (47.62%), Query Frame = 1 Query: 85 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 A VVD GS + KAG A D AP V PS + R G + V D P+ G I +WD ME + HH Y L E IL T+ +PKA RE++ Q+MFETFN Y + QAVLS+YA GR +G +D G G P+ EG A R ++ G DL L + L Sbjct: 8 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAP-EEHPILLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSIYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLIDYLMKIL 194
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT1_TRYBB (Actin A OS=Trypanosoma brucei brucei PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.279e-20 Identity = 71/211 (33.65%), Postives = 101/211 (47.87%), Query Frame = 1 Query: 85 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQELGKTNPSVNLSLYD--VEKLKEQ 678 A V D GS ++K+G + D AP V PS + R + + S + V D P+ G + +WD ME + HH Y L + +L T+ +PK RE++ Q+MFETF + Y QAVLSLY+ GR +G +D G G P+ EG A RR ++ G DLT+ L + L T + S V +KEQ Sbjct: 8 AIVCDNGSGMVKSGFS-GDDAPRHVFPSIVGRPKNEQAMMGSANKKLFVGDEAQAKRGVLALKYPIEHGIVTNWDDMEKVWHHTFYNELRVNPESHN-VLLTEAPMNPKQNREKMTQIMFETFGVPAMYVGIQAVLSLYSSGRTTGIVLDAGDGVTHTVPIYEGYSLPHAIRRVDMAGRDLTEYLMKILMHTGMTFTTSAEKEIVRNIKEQ 216
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT_PUCGR (Actin OS=Puccinia graminis PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.282e-20 Identity = 69/192 (35.94%), Postives = 91/192 (47.40%), Query Frame = 1 Query: 76 KMEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 ++ A V+D GS + KAG A D AP V PS G + V D P+ G + +WD ME + HH Y L E +L T+ +PK RE++ Q+MFETFN FY + QAVLSLYA GR +G +D G G P+ EG A R ++ G DLT L + L Sbjct: 4 EVAALVLDNGSGMCKAGFA-GDDAPRAVFPSICGGPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKVNREKMTQIMFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLIKIL 193
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACTBL_HUMAN (Beta-actin-like protein 2 OS=Homo sapiens GN=ACTBL2 PE=1 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 4.282e-20 Identity = 69/193 (35.75%), Postives = 92/193 (47.67%), Query Frame = 1 Query: 73 SKMEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 +++ A VVD GS + KAG D AP V PS + R G V D P+ G + +WD ME + +H Y L +E IL T+ +PK RE++ Q+MFE FN Y + QAVLSLYA GR +G +D G G I P+ EG A R ++ G DLT L + L Sbjct: 4 NELSALVVDNGSGMCKAGFG-GDDAPRAVFPSMIGRPRHQGVMVGMGQKDCYVGDEAQSKRGVLTLKYPIEHGVVTNWDDMEKIWYHTFYNELRVAP-DEHPILLTEAPLNPKINREKMTQIMFEAFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHIVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 194
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT9_ARATH (Putative actin-9 OS=Arabidopsis thaliana GN=ACT9 PE=5 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.282e-20 Identity = 65/189 (34.39%), Postives = 98/189 (51.85%), Query Frame = 1 Query: 79 MEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKR-----------VLEDGSSSVDNSTLVEDVTMDPVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQ 612 M+ V D G +++AG A D+AP +V P + R V E+G ++ D TL DP+ G + +WD ME + H+ Y L + E +L T+ +PKA RE++ Q+MFE+F++ Y S Q+VL LY+ GR +G +D+G PV EG R ++GG DLT L + Sbjct: 1 MKPIVCDKGHGMVQAGFA-GDEAPKVVFPCVVGRPRDGLNPNESYVGEEGHANRDILTL-----KDPMEHGIVNNWDDMEKIWHYTFYNELRVDP-EEHPVLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHTVPVYEGYALPHGILRLDLGGRDLTDYLIE 182
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT24_DICDI (Putative actin-24 OS=Dictyostelium discoideum GN=act24 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.282e-20 Identity = 71/187 (37.97%), Postives = 95/187 (50.80%), Query Frame = 1 Query: 91 VVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDG---------SSSVDNSTLVEDVT--MDPVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 V+D GS + KAG A D AP V PS + R G S D + D+ PV RG I +W+ ME++ HH Y L E +L T+P + KA RE++ Q+MFETFN Y + QAVLSLYA GR +G +D G G PV EG ++ R + G DLT +++ L Sbjct: 10 VIDNGSGMCKAGFAGYD-APHAVFPSIVGRPRHTGVMVGMGQKDSYIGDEAQSKRDILNLKFPVERGIITNWNDMEEIWHHTFYNELRVAP-EEHPVLLTEPPLNSKANREKMPQIMFETFNTPAMYVAIQAVLSLYASGRATGVILDSGDGVSYTVPVYEGNTFPLSITRLHLAGGDLTDYMSRLL 194
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT1_ARATH (Actin-1/3 OS=Arabidopsis thaliana GN=ACT1 PE=1 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 4.282e-20 Identity = 69/191 (36.13%), Postives = 91/191 (47.64%), Query Frame = 1 Query: 79 MEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 ++ V D G+ ++KAG A D AP V PS + R G V D P+ G + +WD ME + HH Y L E IL T+ +PKA RE++ Q+MFETFN Y + QAVLSLYA GR +G +D G G P+ EG A R ++ G DLT L + L Sbjct: 7 IQPLVCDNGTGMVKAGFA-GDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAP-EEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKIL 195
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT_GOSHI (Actin OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.593e-20 Identity = 68/191 (35.60%), Postives = 91/191 (47.64%), Query Frame = 1 Query: 79 MEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 ++ V D G+ ++KAG A D AP V PS + R G V D P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+MFETFN Y + QAVLSLYA GR +G +D G G P+ EG A R ++ G DLT L + L Sbjct: 7 IQPLVCDNGTGMVKAGFA-GDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKIL 195 The following BLAST results are available for this feature:
BLAST of FC868968 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 422
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868968 ID=FC868968; Name=FC868968; organism=Citrus clementina; type=EST; length=684bpback to top |