FC868968
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACTBM_HUMAN (Beta-actin-like protein 3 OS=Homo sapiens GN=ACTBL3 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.540e-20 Identity = 69/187 (36.90%), Postives = 91/187 (48.66%), Query Frame = 1 Query: 91 VVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDG--------SSSVDNSTLVEDVTMD---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 V+D GS + KAG A D AP V PS + R G S V + + P+ G I +WD ME + HH Y L E IL T+ +PKA RE++ Q+MFETFN Y + QAVLSLY GR +G +D G G P+ EG A+ R ++ G +LT L + L Sbjct: 9 VIDNGSGMCKAGFA-GDDAPQAVFPSIVGRPRHQGMMEGMHQKESYVGKEAQSKRGMLTLKYPMEHGIITNWDDMEKIWHHTFYNELRVAP-EEHPILLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYTSGRTTGIVMDSGDGFTHTVPIYEGNALPHATLRLDLAGRELTDYLMKIL 193
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT7_ORYSJ (Actin-7 OS=Oryza sativa subsp. japonica GN=ACT7 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.540e-20 Identity = 68/191 (35.60%), Postives = 91/191 (47.64%), Query Frame = 1 Query: 79 MEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 ++ V D G+ ++KAG A D AP V PS + R G V D P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+MFETFN Y + QAVLSLYA GR +G +D G G P+ EG A R ++ G DLT L + L Sbjct: 6 IQPIVCDNGTGMVKAGFA-GDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPMNPKANREKMTQIMFETFNCPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFTLPHAILRLDLAGRDLTDNLMKIL 194
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT7_ORYSI (Actin-7 OS=Oryza sativa subsp. indica GN=ACT7 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.540e-20 Identity = 68/191 (35.60%), Postives = 91/191 (47.64%), Query Frame = 1 Query: 79 MEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 ++ V D G+ ++KAG A D AP V PS + R G V D P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+MFETFN Y + QAVLSLYA GR +G +D G G P+ EG A R ++ G DLT L + L Sbjct: 6 IQPIVCDNGTGMVKAGFA-GDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPMNPKANREKMTQIMFETFNCPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFTLPHAILRLDLAGRDLTDNLMKIL 194
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT4_ARATH (Actin-4 OS=Arabidopsis thaliana GN=ACT4 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.540e-20 Identity = 68/191 (35.60%), Postives = 91/191 (47.64%), Query Frame = 1 Query: 79 MEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 ++ V D G+ ++KAG A D AP V PS + R G V D P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+MFETFN Y + QAVLSLYA GR +G +D G G P+ EG A R ++ G DLT L + L Sbjct: 7 IQPLVCDNGTGMVKAGFA-GDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKIL 195
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT12_ARATH (Actin-12 OS=Arabidopsis thaliana GN=ACT12 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.540e-20 Identity = 68/191 (35.60%), Postives = 91/191 (47.64%), Query Frame = 1 Query: 79 MEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 ++ V D G+ ++KAG A D AP V PS + R G V D P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+MFETFN Y + QAVLSLYA GR +G +D G G P+ EG A R ++ G DLT L + L Sbjct: 7 IQPLVCDNGTGMVKAGFA-GDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKIL 195
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACTL9_RAT (Actin-like protein 9 OS=Rattus norvegicus GN=Actl9 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.246e-19 Identity = 67/213 (31.46%), Postives = 109/213 (51.17%), Query Frame = 1 Query: 73 SKMEAAVVDAGSKLLK---AGPAIPDQAPSMVIPSQMKR--VLEDGSSSVDNSTLV----EDVTMDPVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQELGKTNPSVNLSLYD-VEKLKEQF 681 +KM V+D G+ + K AG P ++ Q KR +E + E M PV G + DW+A E + H+L L + + +LFTDP +P + RE+LV++ FE+ + Y + Q+VLS+YA GR++G VD GHG PV +G +R ++ G LTK LA+++ +++ +V D +E +K+Q+ Sbjct: 42 TKMSGVVIDMGTGICKMGFAGQTRPTYIVRNIVGCQPKRRTTMEQPKMEMFIGEAAHARPELTLMHPVRNGIVVDWEAAEFIWRHILENDLRLDT-QDHPLLFTDPPFNPASNREKLVEVAFESLHSPAIYVASQSVLSVYANGRVNGLVVDTGHGVSYTVPVFQGYNLPSGIQRMDLAGHYLTKFLAEKILRSSFAVKKEDMDTMENIKQQY 253
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT8_ARATH (Actin-8 OS=Arabidopsis thaliana GN=ACT8 PE=1 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.246e-19 Identity = 69/191 (36.13%), Postives = 92/191 (48.17%), Query Frame = 1 Query: 79 MEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGSSSVDNS--TLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 ++ V D G+ ++KAG A D AP V PS + R G N V D P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+MFETFN Y + QAVLSLYA GR +G +D G G P+ EG A R ++ G DLT L + L Sbjct: 7 IQPIVCDNGTGMVKAGFA-GDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAP-EEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKIL 195
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT6_DIPDE (Actin-6 (Fragment) OS=Diphyllobothrium dendriticum GN=ACT6 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.246e-19 Identity = 67/192 (34.90%), Postives = 93/192 (48.44%), Query Frame = 1 Query: 76 KMEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 +++ VVD GS + KAG A D +P V PS + R + + + V D P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ +MFETFN Y + QAVLSLYA GR +G +D G G P+ EG A R ++ G DLT L + L Sbjct: 2 EVQPLVVDNGSGMCKAGFA-GDDSPRAVFPSIVGRPRQQSIMVGMGNKDSYVGDEAQSKRGILSLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTSIMFETFNCPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 191
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT5_ARATH (Putative actin-5 OS=Arabidopsis thaliana GN=ACT5 PE=5 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.246e-19 Identity = 67/187 (35.83%), Postives = 90/187 (48.13%), Query Frame = 1 Query: 85 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQ 612 A V D G+ ++KAG A D AP V PS + R G + T V D P+ G + +WD ME + HH Y L E E IL T+ +PK RE++ Q+MFE+F Y QAVLSLY+ GR +G +D G G P+ EG A R ++ G DLT+ L + Sbjct: 10 AIVCDNGTGMVKAGFA-GDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEP-EEHPILLTEAPLNPKVNREKMTQIMFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTEYLTK 194
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT2_ARATH (Actin-2 OS=Arabidopsis thaliana GN=ACT2 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.246e-19 Identity = 69/191 (36.13%), Postives = 92/191 (48.17%), Query Frame = 1 Query: 79 MEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGSSSVDNS--TLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 ++ V D G+ ++KAG A D AP V PS + R G N V D P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+MFETFN Y + QAVLSLYA GR +G +D G G P+ EG A R ++ G DLT L + L Sbjct: 7 IQPIVCDNGTGMVKAGFA-GDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAP-EEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKIL 195 The following BLAST results are available for this feature:
BLAST of FC868968 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 422
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868968 ID=FC868968; Name=FC868968; organism=Citrus clementina; type=EST; length=684bpback to top |