FC868968
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT2_TRYBB (Actin B OS=Trypanosoma brucei brucei PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.625e-19 Identity = 69/213 (32.39%), Postives = 101/213 (47.42%), Query Frame = 1 Query: 85 AAVVDAGSKLLKAGPAIPDQA----PSMVIPSQMKRVLEDGSSSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQELGKTNPSVNLSLYD--VEKLKEQ 678 A V D GS ++K+G + D PS+V P + ++ + S V D P+ G + +WD ME + HH Y L + +L T+ +PK RE++ Q+MFETF + Y QAVLSLY+ GR +G +D G G P+ EG A RR ++ G DLT+ L + L +T + S V +KEQ Sbjct: 8 AIVCDNGSGMVKSGFSGDDAPRHLFPSIVGPPKNEQAM---MGSAKQEMFVGDEAQAKRGVLALKYPIEHGIVTNWDDMEKVWHHTFYNELRVNPESHN-VLLTEAPMNPKQNREKMTQIMFETFGVPAMYVGIQAVLSLYSSGRTTGIVLDAGDGVTHTVPIYEGYSLPHAIRRVDMAGRDLTEYLMKILMETGMTFTTSAQKEIVRNIKEQ 216
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT_TRYCR (Actin OS=Trypanosoma cruzi PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.734e-19 Identity = 69/214 (32.24%), Postives = 101/214 (47.20%), Query Frame = 1 Query: 76 KMEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQELGKTNPSVNLSLYD--VEKLKEQ 678 + A V D GS ++KAG + D A V PS + R + + S V D P+ G + +WD ME + HH Y + + +L T+ +PK RE++ Q+MFETF + Y QAVLSLY+ GR +G +D G G P+ EG A RR ++ G DLT+ L + L ++ + S V +KEQ Sbjct: 5 EQSAIVCDNGSGMVKAGFS-GDDALCHVFPSIVGRPKNEQAMMGSASKKLFVGDEAQAKRGVLSLKYPIEHGIVTNWDDMEKIWHHTFYNDVRVNPESHS-VLLTEAPMNPKQNREKMTQIMFETFGVPAMYVGIQAVLSLYSSGRTTGIVLDAGDGVTHTVPIYEGYSLPHAIRRMDMAGRDLTEYLMKLLMESGMTFTTSAEKEIVRNVKEQ 216
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACTM_STRPU (Actin, muscle OS=Strongylocentrotus purpuratus PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.734e-19 Identity = 68/189 (35.98%), Postives = 88/189 (46.56%), Query Frame = 1 Query: 85 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 A VVD GS + K G A D AP V PS + R G + V D P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+MFETFN Y + +AVLSLYA GR +G G G P+ EG A R ++ G DLT L + L Sbjct: 8 ALVVDNGSGMCKTGFA-GDDAPRAVFPSIVGRPRHHGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIKAVLSLYASGRTTGIXXXXGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 194
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACTM_BRAFL (Actin, muscle OS=Branchiostoma floridae PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.734e-19 Identity = 68/183 (37.16%), Postives = 84/183 (45.90%), Query Frame = 1 Query: 91 VVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLL 606 V D GS L+KAG A D AP V PS + R G V D PV G + +WD ME + HH Y L E L T+ +PKA RE++ Q+MFETFN Y QAVL LYA GR +G +D G G P+ EG A R ++ G +LT L Sbjct: 12 VCDNGSGLVKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDAYVGDEAQSKRGILTLKYPVEHGIVTNWDDMEKVWHHTFYNELRIAP-EENPCLLTEAPLNPKANREKMTQIMFETFNSPAMYVCIQAVLCLYASGRTTGIVLDSGDGVSHTVPIYEGYAMPHAILRLDLAGRELTNYL 192
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACTM_BRABE (Actin, muscle OS=Branchiostoma belcheri PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.734e-19 Identity = 68/183 (37.16%), Postives = 84/183 (45.90%), Query Frame = 1 Query: 91 VVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLL 606 V D GS L+KAG A D AP V PS + R G V D PV G + +WD ME + HH Y L E L T+ +PKA RE++ Q+MFETFN Y QAVL LYA GR +G +D G G P+ EG A R ++ G +LT L Sbjct: 13 VCDNGSGLVKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDAYVGDEAQSKRGILTLKYPVEHGIVTNWDDMEKVWHHTFYNELRIAP-EENPCLLTEAPLNPKANREKMTQIMFETFNSPAMYVCIQAVLCLYASGRTTGIVLDSGDGVSHTVPIYEGYAMPHAILRLDLAGRELTNYL 193
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT3_SOLTU (Actin-58 OS=Solanum tuberosum GN=AC58 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.734e-19 Identity = 67/191 (35.08%), Postives = 90/191 (47.12%), Query Frame = 1 Query: 79 MEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 ++ V D G+ ++KAG A D AP V P + R G V D P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+MFETFN Y + QAVLSLYA GR +G +D G G P+ EG A R ++ G DLT L + L Sbjct: 7 IQPLVCDNGTGMVKAGFA-GDDAPRAVFPRIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKIL 195
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT_EUPCR (Actin, cytoplasmic OS=Euplotes crassus PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.183e-19 Identity = 66/192 (34.38%), Postives = 95/192 (49.48%), Query Frame = 1 Query: 82 EAAVVDAGSKLLKAGPAIPDQA----PSMVIPSQMKRVLEDGSSSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 EA VVD GS ++KAG A +Q PS+V + K+V+ G+ + D V D P+ G I+DWD M+ + + Y L E N +L PL +PK RE + ++MFE ++ Y QAVLSLY+ GR +G VD G G + P+ EG A + + G DLT + + L Sbjct: 9 EAIVVDNGSGVVKAGFAGENQPCSVFPSVVAKPKTKQVIVGGAGNKD--CFVGDERQQKRGVCTLSYPIKSGMIKDWDGMQKIWDYTFYNELRIETENHPVLLTEAPL-NPKQNRENMCRIMFEEYDFPSMYIQIQAVLSLYSAGRTTGIVVDSGDGVTHVVPIFEGYQIPHAIEKILLAGRDLTDYMCRIL 197
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT_ACECL (Actin (Fragment) OS=Acetabularia cliftonii PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.183e-19 Identity = 52/125 (41.60%), Postives = 69/125 (55.20%), Query Frame = 1 Query: 244 PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 P+ G + +WD ME + HH Y L E +L T+ +PK+ RE+L Q+MFETFN+ Y S QAVLSLYA GR +G +D G G P+ EG A R ++ G DLT L + L Sbjct: 52 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPMNPKSNREKLTQIMFETFNVPAMYVSIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLTKLL 175
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACTM_BRALA (Actin, muscle OS=Branchiostoma lanceolatum PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.183e-19 Identity = 68/183 (37.16%), Postives = 84/183 (45.90%), Query Frame = 1 Query: 91 VVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLL 606 V D GS L+KAG A D AP V PS + R G V D PV G + +WD ME + HH Y L E L T+ +PKA RE++ Q+MFETFN Y QAVL LYA GR +G +D G G P+ EG A R ++ G +LT L Sbjct: 14 VCDNGSGLVKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDAYVGDEAQSKRGILTLKYPVEHGIVTNWDDMEKIWHHTFYNELRIAP-EENPCLLTEAPLNPKANREKMTQIMFETFNSPAMYVCIQAVLCLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRELTNYL 194
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT12_SOLTU (Actin-100 (Fragment) OS=Solanum tuberosum GN=AC100 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.183e-19 Identity = 53/135 (39.26%), Postives = 73/135 (54.07%), Query Frame = 1 Query: 244 PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQELGKTNPSVNLS 648 P+ G + +WD ME + HH Y L +E +L T+ +PKA RE++ Q+MFETFN+ Y + QAVLSLYA GR +G +D G G P+ EG A R ++ G DLT L + L + S S Sbjct: 52 PIEHGIVSNWDDMEKIWHHTFYNELRVSP-DEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDCLMKILTERGYSFTTS 185 The following BLAST results are available for this feature:
BLAST of FC868968 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 422
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868968 ID=FC868968; Name=FC868968; organism=Citrus clementina; type=EST; length=684bpback to top |