FC868968
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ARP2_ORYSJ (Actin-related protein 2 OS=Oryza sativa subsp. japonica GN=ARP2 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.076e-19 Identity = 65/208 (31.25%), Postives = 102/208 (49.04%), Query Frame = 1 Query: 91 VVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGSSSVDNSTLVEDVT----------MD---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQELGKTNPSVNLSLYDVEKLKE 675 V D G+ +K G A + P+ V P + R L S+ L + V +D PV G ++ WD M + H Y+ L + +E +IL TDP +P RE++++ MFE +N +G + QAVLSLYA G ++G +D G G + PV++G ++R V G +T L L + ++N S D E ++E Sbjct: 8 VCDNGTGYVKCGFA-GENFPTSVFPCVVGRPLLRYEESLQEQELTDIVVGAACADLRHQLDVSYPVTNGIVQSWDDMGHIWDHAFYSELKVDP-SECKILLTDPPLNPVKNREKMIETMFEKYNFAGVFIQVQAVLSLYAQGLLTGLVIDSGDGVTHVVPVVDGFSYPHITKRMNVAGRHITSYLVDLLSRRGYAMNKSA-DFETVRE 212
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ARP2_ORYSI (Actin-related protein 2 OS=Oryza sativa subsp. indica GN=ARP2 PE=2 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 8.076e-19 Identity = 65/208 (31.25%), Postives = 102/208 (49.04%), Query Frame = 1 Query: 91 VVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGSSSVDNSTLVEDVT----------MD---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQELGKTNPSVNLSLYDVEKLKE 675 V D G+ +K G A + P+ V P + R L S+ L + V +D PV G ++ WD M + H Y+ L + +E +IL TDP +P RE++++ MFE +N +G + QAVLSLYA G ++G +D G G + PV++G ++R V G +T L L + ++N S D E ++E Sbjct: 8 VCDNGTGYVKCGFA-GENFPTSVFPCVVGRPLLRYEESLQEQELTDIVVGAACADLRHQLDVSYPVTNGIVQSWDDMGHIWDHAFYSELKVDP-SECKILLTDPPLNPVKNREKMIETMFEKYNFAGVFIQVQAVLSLYAQGLLTGLVIDSGDGVTHVVPVVDGFSYPHITKRMNVAGRHITSYLVDLLSRRGYAMNKSA-DFETVRE 212
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ARP2_CAEEL (Actin-related protein 2 OS=Caenorhabditis elegans GN=arx-2 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.076e-19 Identity = 64/211 (30.33%), Postives = 104/211 (49.29%), Query Frame = 1 Query: 91 VVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGSSSVDNSTLVEDVTMD-------------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQELGKTNPSVNLS--LYDVEKLKEQ 678 VVD G+ +K G A P+ + PS + R + + V N + + + + P+ G +R+WD M + H + E ++L T+P +P + RE++ Q+MFE + + Y + QAVL+LYA G ++G VD G G I PV EG H +RR ++ G D+TK L + L + + N S V ++KE+ Sbjct: 10 VVDNGTGFVKCGYA-GTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRDITKYLIKLLLQRGYNFNHSADFETVRQMKEK 219
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACL7B_HUMAN (Actin-like protein 7B OS=Homo sapiens GN=ACTL7B PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.076e-19 Identity = 63/215 (29.30%), Postives = 110/215 (51.16%), Query Frame = 1 Query: 70 VSKMEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGSSSVDNS--TLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQELGKTNPS-VNLSLYDVEKLKEQ 678 V K++A ++D GS+ K G A + P+ I S + + + + + D TLV ++ P+ G + DWD ++D+ ++ + E +L +DP SP + RE+ +LMFETF I + + Q++LS+Y+ G+ SG V+ GHG + P+ EG V + R + G DLT L Q L + + + L+ +E +K++ Sbjct: 46 VHKIKAVIIDLGSQYCKCGYA-GEPRPTYFISSTVGKRCPEAADAGDTRKWTLVGHELLNTEAPLKLVNPLKHGIVVDWDCVQDIWEYIFRTAMKILP-EEHAVLVSDPPLSPSSNREKYAELMFETFGIPAMHVTSQSLLSIYSYGKTSGLVVESGHGVSHVVPISEGDVLPGLTSRADYAGGDLTNYLMQLLNEAGHAFTDDHLHIIEHIKKK 258
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACTD_PHYPO (Actin, spherule isoform OS=Physarum polycephalum GN=ARDD PE=2 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 1.055e-18 Identity = 70/214 (32.71%), Postives = 100/214 (46.73%), Query Frame = 1 Query: 82 EAAVVDAGSKLLKAGPAIPDQAPSMVIPSQM--KRVLEDGSSSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQELGKTNPSVNLS--LYDVEKLKEQFS 684 EA V+D GS + KAG A D P + PS + R E + V D P+ +G + +WD ME + HH Y + E +L T+ +PKA RE++ Q+MFE+F+ Y + QAVLSL A GR +G +D G G P+ EG A R + G DLT L L + + N + L V +KE+ + Sbjct: 4 EAVVIDNGSGMCKAGFA-GDNTPRAMFPSIVGHPRHTEAMMEIGHKHSYVGDEAQSKRGILALKYPIEQGIVNNWDDMEQIWHHTFYNEMRVAP-EEHPVLLTEAPLNPKANREKMTQIMFESFSAPAMYVAIQAVLSLRASGRTTGIVLDSGDGASHAVPIYEGCALPHAILRIDAAGRDLTHYLRLMLAERGYAFNTTAELEIVRDIKEKLA 215
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT1_PEA (Actin-1 OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.055e-18 Identity = 51/125 (40.80%), Postives = 70/125 (56.00%), Query Frame = 1 Query: 244 PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+MFETFN+ Y + QAVLSLYA GR +G +D G G P+ EG A R ++ G DLT+ L + L Sbjct: 71 PIEHGIVSNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTESLMKIL 194
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT1_TETTH (Actin, macronuclear OS=Tetrahymena thermophila PE=1 SV=3) HSP 1 Score: 93.2041 bits (230), Expect = 1.378e-18 Identity = 65/187 (34.76%), Postives = 91/187 (48.66%), Query Frame = 1 Query: 73 SKMEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRV--------LEDGSSSVDNSTLVEDVTMD---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTK 600 S+ A V+D GS + KAG A D AP PS + R ++ V + ++ P+ G + D+D ME + HH Y L E L T+ +PK RE++ + MFETFN+ FY + QAVLSLYA GR +G VD G G P+ EG A R ++ G +LT+ Sbjct: 4 SESPAIVIDNGSGMCKAGIA-GDDAPRAAFPSIVGRPKMPGIMVGMDQKECYVGEEAQAKRGVLNLKYPIEHGIVTDYDDMEKIWHHCFYNELRVTP-EEHPCLLTEAPQNPKLNREKMTKTMFETFNVPSFYVAIQAVLSLYASGRTTGIVVDSGDGVTHTVPIYEGYALPHAILRIDLAGRELTE 188
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: POTEE_HUMAN (POTE ankyrin domain family member E OS=Homo sapiens GN=POTEE PE=1 SV=3) HSP 1 Score: 92.8189 bits (229), Expect = 1.799e-18 Identity = 67/187 (35.83%), Postives = 90/187 (48.13%), Query Frame = 1 Query: 91 VVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDG--------SSSVDNSTLVEDVTMD---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 V+D GS + KAG A D AP V PS + R + G S V + + P+ G I +WD ME + HH Y L E IL T+ +PKA RE++ Q+MFETFN Y + QAV SLY GR +G +D G G P+ EG A+ R ++ G +L L + L Sbjct: 709 VIDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRQQGMMGGMHQKESYVGKEAQSKRGILTLKYPMEHGIITNWDDMEKIWHHTFYNELRVAP-EEHPILLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVPSLYTSGRTTGIVMDSGDGVTHTVPIYEGNALPHATLRLDLAGRELPDYLMKIL 893
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACTZ_PNECA (Actin-2 OS=Pneumocystis carinii PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.799e-18 Identity = 61/189 (32.28%), Postives = 94/189 (49.74%), Query Frame = 1 Query: 94 VDAGSKLLKAGPAIPDQAPSMVIPSQMKRV--LEDGSSSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQELGKT 627 +D GS ++KAG A DQ P PS + R L+ + +++ + + + P+ G + DWD ME + + L E +L T+ +P+ R+Q Q+ FETFN+ ++S QAVLSLYA GR +G +D G G P+ EG A RR ++ G D+T+ L L K+ Sbjct: 14 IDNGSGVIKAGFAGEDQ-PKSFFPSYVGRPKHLKIMAGAIEGDIFIGNKAQELRGLLKIKYPIEHGIVVDWDDMERIWQFIYTEELK-TVSEEHPVLLTEAPLNPRTNRDQAAQVFFETFNVPALFTSIQAVLSLYASGRTTGVVLDSGDGVTHAVPIYEGFAMPSAIRRIDIAGRDVTEYLQLLLRKS 200
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT6_TOBAC (Actin-103 (Fragment) OS=Nicotiana tabacum PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.799e-18 Identity = 51/125 (40.80%), Postives = 69/125 (55.20%), Query Frame = 1 Query: 244 PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+MFETFN+ Y + QAVLSLYA GR +G +D G G P+ EG A R ++ G DLT L + L Sbjct: 52 PIEHGIVSNWDDMEKIWHHTFYNELRVAH-EEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKIL 175 The following BLAST results are available for this feature:
BLAST of FC868968 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 422
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868968 ID=FC868968; Name=FC868968; organism=Citrus clementina; type=EST; length=684bpback to top |