FC868968
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT23_DICDI (Putative actin-23 OS=Dictyostelium discoideum GN=act23 PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.799e-18 Identity = 65/180 (36.11%), Postives = 85/180 (47.22%), Query Frame = 1 Query: 112 LLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 + KAG A D AP V PS + R G + V D P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+MFETFN Y + QAVLSLYA GR +G +D G G P+ EG A R ++ G DLT L + L Sbjct: 1 MCKAGFA-GDDAPCTVFPSIVGRPRHTGVMVGMCQKGSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 178
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT4_SOLLC (Actin-105 (Fragment) OS=Solanum lycopersicum PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.350e-18 Identity = 50/121 (41.32%), Postives = 68/121 (56.20%), Query Frame = 1 Query: 244 PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLL 606 P+ G + +WD ME + HH Y L ++ IL T+ +PKA RE++ Q+MFETFN+ Y + QAVLSLYA GR +G +D G G P+ EG A R ++ G DLT L Sbjct: 52 PIRHGIVDNWDDMEKIWHHTFYNELRVAPEDDS-ILLTEAPLNPKANREKMTQIMFETFNVPAMYIAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL 171
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT2_SOLTU (Actin-46 (Fragment) OS=Solanum tuberosum PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.350e-18 Identity = 50/125 (40.00%), Postives = 69/125 (55.20%), Query Frame = 1 Query: 244 PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+MFETFN Y + QAVLSLYA GR +G +D G G P+ EG A R ++ G DLT+ + + L Sbjct: 52 PIEHGIVNNWDDMEKIWHHTFYNELRVAP-EERPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGADLTEYMVKIL 175
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT2_SOLLC (Actin-51 (Fragment) OS=Solanum lycopersicum PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.350e-18 Identity = 51/125 (40.80%), Postives = 69/125 (55.20%), Query Frame = 1 Query: 244 PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+MFETFN+ Y + QAVLSLYA GR +G +D G G P+ EG A R ++ G DLT L + L Sbjct: 52 PIEHGIVSNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKIL 175
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ARP2_YEAST (Actin-related protein 2 OS=Saccharomyces cerevisiae GN=ARP2 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.069e-18 Identity = 63/212 (29.72%), Postives = 101/212 (47.64%), Query Frame = 1 Query: 91 VVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGSSSVDNSTLVEDVTMD--------------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQELGKTNPSVN--LSLYDVEKLKEQ 678 V+D G+ +K G A + P PS + R + +T ++D+ + P+ G I++W ME L + + + + G+IL T+P +P RE++ ++MFE ++ G Y + QAVL+LYA G SG VD G G I PV E V +RR +V G D+T+ L L + + N V ++KE+ Sbjct: 8 VLDQGTGFVKIGRA-GENFPDYTFPSIVGRPILRAEERASVATPLKDIMIGDEASEVRSYLQISYPMENGIIKNWTDMELLWDYAFFEQMKLPSTSNGKILLTEPPMNPLKNREKMCEVMFEKYDFGGVYVAIQAVLALYAQGLSSGVVVDSGDGVTHIVPVYESVVLSHLTRRLDVAGRDVTRHLIDLLSRRGYAFNRTADFETVRQIKEK 218
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT_PICGU (Actin OS=Pichia guilliermondii GN=ACT1 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.069e-18 Identity = 62/182 (34.07%), Postives = 87/182 (47.80%), Query Frame = 1 Query: 112 LLKAGPAIPDQAPSMVIPSQMKRVLEDGS--SSVDNSTLVEDVTMD---------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQELGK 624 + KAG A D AP V PS + R G + V D P+ G +++WD ME + HH Y L E +L T+ +PK RE++ Q+MFETFN+ FY + QAVLSLY+ GR +G +D G G + P+ G R ++ G DLT L + L + Sbjct: 1 MCKAGFA-GDDAPRAVFPSIVGRPRHQGIMVGMGQRDSYVGDEAQSKRGILTLRYPIEHGIVKNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPMNPKLNREKMTQIMFETFNVPAFYVNIQAVLSLYSSGRTTGIVLDSGDGVTHVVPIYAGFSLPHGILRLDLAGRDLTDYLMKILSE 180
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACTZ_NEUCR (Actin-like protein OS=Neurospora crassa GN=ro-4 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.069e-18 Identity = 64/191 (33.51%), Postives = 94/191 (49.21%), Query Frame = 1 Query: 91 VVDAGSKLLKAGPAIPDQAPSMVIPSQMKRV--LEDGSSSVDNSTLVEDVTMD----------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQELGKT 627 V+D GS ++AG A D P PS + R L + +++ + P+ G + DWD ME + +V GL E +L T+P +P+A R+ Q++FETFN+ Y+S QAVLSLYA GR +G +D G G PV +G + RR +V G D+T+ L L K+ Sbjct: 11 VLDNGSGTIRAGFA-GDDVPKCHFPSFVGRPKHLRVLAGALEGEVFIGQKAASELRGLLKIRYPLEHGIVTDWDDMEKIWAYVYDEGLK-TLSEEHPVLLTEPPLNPRANRDTAAQILFETFNVPALYTSIQAVLSLYASGRTTGVVLDSGDGVSHAVPVYQGFTVPNSIRRIDVAGRDVTEYLQTLLRKS 199
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT3_ECHGR (Actin-3 (Fragment) OS=Echinococcus granulosus GN=ACTIII PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.069e-18 Identity = 51/125 (40.80%), Postives = 68/125 (54.40%), Query Frame = 1 Query: 244 PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLTKLLAQEL 618 P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+MFETFN Y + QAVLSLYA GR +G +D G G P+ EG A R ++ G DLT L + L Sbjct: 4 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFNCPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 127
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT2_PLAYO (Actin-2 OS=Plasmodium yoelii yoelii GN=PY01545 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.069e-18 Identity = 63/182 (34.62%), Postives = 92/182 (50.55%), Query Frame = 1 Query: 85 AAVVDAGSKLLKAGPAIPDQAPSMVIPS-----QMKRVL---EDGSSSVDNSTLVEDVTMD---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLT 597 A VVD GS ++K+G A D AP V PS +M ++ E V + + + P+ G + +WD ME + H + L E +L T+ +PK RE++ Q+MFE+F++ Y S QA+LSLYA GR +G +D G G P+ EG V A R ++ G DLT Sbjct: 7 ALVVDNGSGMVKSGLA-GDDAPKCVFPSIIGIPKMPNIMVGMEQKECYVGDEAQNKRGILTLKYPIEHGIVTNWDDMEKIWRHTFFNELRVSP-EEHPVLLTEAPLNPKTNREKMTQIMFESFDVPAMYVSIQAILSLYASGRTTGIVLDSGDGVTHTVPIYEGYVLPHAINRTDMAGRDLT 186
BLAST of FC868968 vs. ExPASy Swiss-Prot
Match: ACT2_PLABA (Actin-2 OS=Plasmodium berghei (strain Anka) GN=PB001050.02.0 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.069e-18 Identity = 63/182 (34.62%), Postives = 92/182 (50.55%), Query Frame = 1 Query: 85 AAVVDAGSKLLKAGPAIPDQAPSMVIPS-----QMKRVL---EDGSSSVDNSTLVEDVTMD---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGGMDLT 597 A VVD GS ++K+G A D AP V PS +M ++ E V + + + P+ G + +WD ME + H + L E +L T+ +PK RE++ Q+MFE+F++ Y S QA+LSLYA GR +G +D G G P+ EG V A R ++ G DLT Sbjct: 7 ALVVDNGSGMVKSGLA-GDDAPKCVFPSIIGIPKMPNIMVGMEQKECYVGDEAQNKRGILTLKYPIEHGIVTNWDDMEKIWRHTFFNELRVSP-EEHPVLLTEAPLNPKTNREKMTQIMFESFDVPAMYVSIQAILSLYASGRTTGIVLDSGDGVTHTVPIYEGYVLPHAINRTDMAGRDLT 186 The following BLAST results are available for this feature:
BLAST of FC868968 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 422
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868968 ID=FC868968; Name=FC868968; organism=Citrus clementina; type=EST; length=684bpback to top |