FC868969

Overview
NameFC868969
Unique NameFC868969
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length783
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868969 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.234e-16
Identity = 46/108 (42.59%), Postives = 67/108 (62.04%), Query Frame = 2
Query:  437 FTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 760
            FT ++L+ AT  F P ++LGEGG+G V++G          K  +G  VAVK L  +  Q  +E+  EV+ +G + H NLV+L+GYCIE   R+LVYE++  G+LE  L
Sbjct:  171 FTLRDLELATNRFAPVNVLGEGGYGVVYRG----------KLVNGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNSGNLEQWL 268          
BLAST of FC868969 vs. ExPASy Swiss-Prot
Match: PAM74_ARATH (Probable LRR receptor-like serine/threonine-protein kinase PAM74 OS=Arabidopsis thaliana GN=PAM74 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.234e-16
Identity = 52/130 (40.00%), Postives = 74/130 (56.92%), Query Frame = 2
Query:  383 DNPDPAPTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRKT 772
            ++P+P+   +K      +FT+ E+   T NF+   ++GEGGFG V  G I  NG+          VAVK L     QG++ + AEVD L ++HH NLV L+GYC E D   L+YEF+ +G L  HL  K+
Sbjct:  556 NSPEPSIETKKR-----RFTYSEVIKMTNNFQ--RVVGEGGFGVVCHGTI--NGSEQ--------VAVKVLSQSSSQGYKHFKAEVDLLLRVHHTNLVSLVGYCDERDHLALIYEFLPKGDLRQHLSGKS 668          
BLAST of FC868969 vs. ExPASy Swiss-Prot
Match: LRKA3_ARATH (Lectin-domain containing receptor kinase A4.3 OS=Arabidopsis thaliana GN=LECRKA4.3 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.612e-16
Identity = 43/112 (38.39%), Postives = 70/112 (62.50%), Query Frame = 2
Query:  434 QFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRK 769
            +F +++L  AT  F+ + ++G GGFG V++G I           S   +AVK + P+ +QG RE+VAE++ LG+L H NLV L G+C   +  LL+Y+++  GSL++ L+ K
Sbjct:  350 RFRYRDLYKATEGFKENRVVGTGGFGIVYRGNIRS---------SSDQIAVKKITPNSMQGVREFVAEIESLGRLRHKNLVNLQGWCKHRNDLLLIYDYIPNGSLDSLLYSK 452          
BLAST of FC868969 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.105e-16
Identity = 47/109 (43.12%), Postives = 67/109 (61.47%), Query Frame = 2
Query:  437 FTFQELKSATGNF-RPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 760
            +T++E+   T NF RP   LGEGGFG V+ G + +N            VAVK L     QG++++ AEVD L ++HH NLV L+GYC E    +L+YE+M+ G+L+ HL
Sbjct:  581 YTYEEVAVITNNFERP---LGEGGFGVVYHGNVNDNEQ----------VAVKVLSESSAQGYKQFKAEVDLLLRVHHINLVTLVGYCDEGQHLVLIYEYMSNGNLKQHL 676          
BLAST of FC868969 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.105e-16
Identity = 43/109 (39.45%), Postives = 73/109 (66.97%), Query Frame = 2
Query:  443 FQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRK 769
            +++L +AT  F+ + I+G GGFG VF+G    N ++P    S   +AVK + P+ +QG RE++AE++ LG+L H NLV L G+C + +  LL+Y+++  GSL++ L+ +
Sbjct:  351 YKDLYAATDGFKENRIVGTGGFGTVFRG----NLSSP----SSDQIAVKKITPNSMQGVREFIAEIESLGRLRHKNLVNLQGWCKQKNDLLLIYDYIPNGSLDSLLYSR 451          
BLAST of FC868969 vs. ExPASy Swiss-Prot
Match: CRK24_ARATH (Cysteine-rich receptor-like protein kinase 24 OS=Arabidopsis thaliana GN=CRK24 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.750e-16
Identity = 49/111 (44.14%), Postives = 68/111 (61.26%), Query Frame = 2
Query:  431 LQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLF 763
            LQF F+ +++AT NF   + LG GGFG V+KG      T P    +G  VAVK L     QG  E+  EV  + +L H NLVKL+GY ++ D+++LVYEF+   SL++ LF
Sbjct:  298 LQFEFKAIEAATCNFHNVNKLGHGGFGEVYKG------TFP----NGTEVAVKRLSKTSGQGEEEFKNEVFLVAKLQHRNLVKLLGYAVKGDEKILVYEFLPNKSLDHFLF 398          
BLAST of FC868969 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.690e-16
Identity = 50/138 (36.23%), Postives = 73/138 (52.90%), Query Frame = 2
Query:  377 SSDNPDPAPTDEKSPCQLLQF----TFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRKTIP 778
            SSDN  P      SP + L       F ++ SAT NF    ++G+GGFGYV+K  + +          G   A+K  K    QG  E+  E+  L ++ H +LV L GYC E+ + +LVYEFM +G+L+ HL+   +P
Sbjct:  453 SSDNR-PISQYHNSPLRNLHLGLTIPFTDILSATNNFDEQLLIGKGGFGYVYKAILPD----------GTKAAIKRGKTGSGQGILEFQTEIQVLSRIRHRHLVSLTGYCEENSEMILVYEFMEKGTLKEHLYGSNLP 579          
BLAST of FC868969 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.690e-16
Identity = 47/115 (40.87%), Postives = 68/115 (59.13%), Query Frame = 2
Query:  428 LLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRKT 772
            L + TF  L  AT  F  ++++G GGFG V+K  + +          G  VA+K L     QG RE++AE++ +G++ H NLV L+GYC   ++RLLVYE+M  GSLE  L  K+
Sbjct:  844 LRKLTFAHLLEATNGFSAETMVGSGGFGEVYKAQLRD----------GSVVAIKKLIRITGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKWGSLETVLHEKS 948          
BLAST of FC868969 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.126e-16
Identity = 48/128 (37.50%), Postives = 74/128 (57.81%), Query Frame = 2
Query:  377 SSDNPDPAPTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 760
            +SD   P  ++     +  +F++ ++   T NF+   ILG+GGFG V+ G++  NGT          VAVK L     QG++++ AEV+ L ++HH NLV L+GYC E D   L+YE+M  G L+ H+
Sbjct:  548 ASDGRLPRSSEPAIVTKNRRFSYSQVVIMTNNFQ--RILGKGGFGMVYHGFV--NGTEQ--------VAVKILSHSSSQGYKQFKAEVELLLRVHHKNLVGLVGYCDEGDNLALIYEYMANGDLKEHM 663          
BLAST of FC868969 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.126e-16
Identity = 49/115 (42.61%), Postives = 66/115 (57.39%), Query Frame = 2
Query:  428 LLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKP-DGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRK 769
            L  FTF+EL  AT  F   SILG GGFG V++G          K G G  VAVK LK  +G  G+ ++  E++ +    H NL++LIGYC    +RLLVY +M+ GS+ + L  K
Sbjct:  284 LRSFTFRELHVATDGFSSKSILGAGGFGNVYRG----------KFGDGTVVAVKRLKDVNGTSGNSQFRTELEMISLAVHRNLLRLIGYCASSSERLLVYPYMSNGSVASRLKAK 388          
The following BLAST results are available for this feature:
BLAST of FC868969 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 169
Match NameE-valueIdentityDescription
Y2296_ARATH1.234e-1642.59Probable receptor-like protein kinase At2g42960 OS... [more]
PAM74_ARATH1.234e-1640.00Probable LRR receptor-like serine/threonine-protei... [more]
LRKA3_ARATH1.612e-1638.39Lectin-domain containing receptor kinase A4.3 OS=A... [more]
Y4245_ARATH2.105e-1643.12Probable LRR receptor-like serine/threonine-protei... [more]
LRKA2_ARATH2.105e-1639.45Lectin-domain containing receptor kinase A4.2 OS=A... [more]
CRK24_ARATH2.750e-1644.14Cysteine-rich receptor-like protein kinase 24 OS=A... [more]
Y2232_ARATH4.690e-1636.23Probable receptor-like protein kinase At2g23200 OS... [more]
BRL1_ARATH4.690e-1640.87Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]
Y5182_ARATH6.126e-1637.50Probable LRR receptor-like serine/threonine-protei... [more]
Y2239_ARATH6.126e-1642.61Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC31007B04EF AbioticL1 Citrus clementina cDNA clone C31007B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868969 ID=FC868969; Name=FC868969; organism=Citrus clementina; type=EST; length=783bp
GACTTCACTTCTCTTTTCTCTTTCTTCTTCTATTAAACCAATGGCCAGTC
CCCTCCTCCTCCTCCTCTTGTTTACACTTTGTTTTATCATGCAATTATAT
ATGTAAATTACTACTACTCACTGCAACATGTAACGAAACATAGAAATTAC
AATTAACAAACGAATAAAAAAAATATTAATCTTTCATTTCATGGAAACCA
AGTGCGGTTGCTGGGCTTTTCTTAAACGCGGCGTTAGAGGTTCCTGCAAG
TCCTCTGCTTCTAATCACTCTGCTAACACTATTCCTCGTACTAGTCTTGT
TTATGATGCAGCTACTGAGACGCGATACTTGAATGCTAGTAATCGGGAGC
TATGTGCTCCAAATGAAGCTCACTTGTCCTCGGATAATCCTGATCCAGCT
CCTACAGATGAAAAATCACCATGCCAGCTGCTTCAGTTCACTTTTCAGGA
GCTAAAATCAGCAACTGGAAATTTTAGGCCTGATAGTATTCTTGGGGAGG
GTGGATTTGGATATGTCTTCAAAGGATGGATTGAAGAAAATGGGACAGCT
CCGGCAAAACCCGGGTCGGGAATTACAGTTGCTGTTAAGAGCTTGAAGCC
AGATGGTCTTCAGGGCCATAGAGAATGGGTGGCTGAGGTTGACTTTCTTG
GGCAGCTTCACCATCCTAATCTTGTTAAGCTTATTGGCTACTGCATTGAA
GATGATCAGCGTCTGCTTGTTTATGAATTCATGACTCGTGGTAGTCTTGA
AAATCATCTTTTTCGAAAGACTATACCTCTTCC
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