FC868978
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868978 vs. ExPASy Swiss-Prot
Match: CALR_BERST (Calreticulin OS=Berberis stolonifera PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.303e-22 Identity = 74/192 (38.54%), Postives = 102/192 (53.12%), Query Frame = 3 Query: 162 ESFDESFEGRWIVS--QKDE-YKGVWKHSKSEGH---EDYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVS-KEFDNESPYMIMFGPDKCG-ATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKAEGNFLAADDFQPP 713 E F++ +E +W+ S ++DE G W + + + D G+ E + YAI E S K T+V Q+ V+ + L+CGG Y+K L +G V K+F ++PY IMFGPD CG +T KVH IL GE H +K +D+LTHVYT IL+PD ILID EK G+ D PP Sbjct: 28 ERFEDGWESKWVKSDWKRDENMAGEWNFTSGKWNGDANDKGIQTSEDYRFYAISAAFPE-FSNKGKTLVFQFSVKHEQKLDCGGGYMKLL----SGDVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILT-----KGE-TNHLIKKDVPCETDQLTHVYTFILRPDASYSILIDNVEKQSGSVYTDWDILPP 208
BLAST of FC868978 vs. ExPASy Swiss-Prot
Match: CALR_CHLRE (Calreticulin OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.792e-22 Identity = 69/204 (33.82%), Postives = 101/204 (49.51%), Query Frame = 3 Query: 126 LISASDDATILYESFDESFEGRWIVSQ---KDEYKGVWKHSKS----EGHEDYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCG-ATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKAEGNFLAADDFQPP 713 L+ A+ E+FD S+ RW S D G +K + + D G+ G +K +AI L V+Q+ V+ + L+CGG Y+K + P + EF ++PY IMFGPD CG +T KVH IL +K + +K +D+LTHVYT ++KPDN ++LID +E A G+ D PP Sbjct: 12 LVVAASAKDYFKETFDGSWADRWTKSSWKVSDGSAGEFKLTAGKWYGDAEADKGIQTGPDSKFFAISAPLATVFDNTGKDTVVQFSVKHEQDLDCGGGYIKVV-PATSEKQMGEFGGDTPYSIMFGPDICGYSTRKVHVILTYKGKN------YLIKKDIKAETDQLTHVYTLVIKPDNTYQVLIDLKEVASGSLYEDWDMLPP 208
BLAST of FC868978 vs. ExPASy Swiss-Prot
Match: CALR_BOMMO (Calreticulin OS=Bombyx mori GN=crt PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.441e-21 Identity = 64/186 (34.41%), Postives = 95/186 (51.08%), Query Frame = 3 Query: 171 DESFEGRWIVSQKD-----EYKGVWKHSKSEGHEDYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCG-ATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKAEGNFLAADDFQP 710 D+S+E W+ S+ ++K S+ +D GL E A+ YA+ ++ +P S + +V+Q+ V+ + ++CGG YLK + K+ E+PY IMFGPD CG T KVH I +K H +K D TH+YT I+KPDN +LID E+ G+ A DF P Sbjct: 29 DDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYALSRKF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVF---DCKLEQKDMHGETPYEIMFGPDICGPGTKKVHVIFSYKGKN------HLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLP 204
BLAST of FC868978 vs. ExPASy Swiss-Prot
Match: CALR_MAIZE (Calreticulin OS=Zea mays GN=CRT PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.192e-21 Identity = 75/203 (36.95%), Postives = 104/203 (51.23%), Query Frame = 3 Query: 129 ISASDDATILYESFDESFEGRWIVSQ--KDE-YKGVWKHSKSEGH---EDYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVS-KEFDNESPYMIMFGPDKCG-ATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKAEGNFLAADDFQPP 713 ++A E F++ +E RW+ S+ KDE G W H+ + + ED G+ E + YAI E E S KD T+VLQ+ V+ + L+CGG Y+K L G V K ++ Y I+ PD +T KVH IL K G+ H +K +D+LTHVYT I++PD ILID EEK G+ D PP Sbjct: 20 VAAVAGEVFFQEKFEDGWESRWVKSEWKKDENMAGEWNHTSGKWNGDAEDKGIQTSEDYRFYAISAEYPE-FSNKDKTLVLQFSVKHEQKLDCGGGYVKLL----GGDVDQKTLGGDTSYSIISRPDISRYSTKKVHTILT----KDGK--NHLIKKDVPCQTDQLTHVYTFIIRPDATYSILIDNEEKHTGSIYEHWDILPP 211
BLAST of FC868978 vs. ExPASy Swiss-Prot
Match: CALR_MOUSE (Calreticulin OS=Mus musculus GN=Calr PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.761e-19 Identity = 67/202 (33.17%), Postives = 101/202 (50.00%), Query Frame = 3 Query: 129 ISASDDATILYESF--DESFEGRWIVSQ--KDEYKGVWKHSKSEG--HEDYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCG-ATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKAEGNFLAADDFQPP 713 ++A+D A E F +++ RW+ S+ D K V K G +D GL + A+ YA+ + EP S K T+V+Q+ V+ + ++CGG Y+K +G K+ +S Y IMFGPD CG T KVH I +K I ++ D+ TH+YT I++PDN + ID + G+ DF PP Sbjct: 14 LAAADPAIYFKEQFLDGDAWTNRWVESKHKSDFGKFVLSSGKFYGDLEKDKGLQTSQDARFYALSAKF-EPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLF---PSGLDQKDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKG--KNVLINKDIR----CKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPP 205
BLAST of FC868978 vs. ExPASy Swiss-Prot
Match: CALR_RAT (Calreticulin OS=Rattus norvegicus GN=Calr PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.004e-19 Identity = 67/202 (33.17%), Postives = 99/202 (49.01%), Query Frame = 3 Query: 129 ISASDDATILYESF--DESFEGRWIVSQ--KDEYKGVWKHSKSEGHE--DYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCG-ATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKAEGNFLAADDFQPP 713 ++A+D A E F +++ RW+ S+ D K V K G + D GL + A+ YA+ EP S K T+V+Q+ V+ + ++CGG Y+K G K+ +S Y IMFGPD CG T KVH I +K I ++ D+ TH+YT I++PDN + ID + G+ DF PP Sbjct: 14 LAAADPAIYFKEQFLDGDAWTNRWVESKHKSDFGKFVLSSGKFYGDQEKDKGLQTSQDARFYALSARF-EPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLF---PGGLDQKDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKG--KNVLINKDIR----CKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPP 205
BLAST of FC868978 vs. ExPASy Swiss-Prot
Match: CALR_DROME (Calreticulin OS=Drosophila melanogaster GN=Crc PE=1 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.491e-18 Identity = 65/193 (33.68%), Postives = 94/193 (48.70%), Query Frame = 3 Query: 156 LYESFD-ESFEGRWIVSQ---KDEYKGVWKHSK--SEGHEDYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCG-ATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKAEGNFLAADDFQPP 713 L E+FD E++E WI S+ K+ K V ++ D G+ + A+ YA ++ D S +D +V+Q+ V+ + ++CGG Y+K + + ESPY IMFGPD CG T KVH I +K H + D TH YT I++PDN +LID E+ GN DF P Sbjct: 23 LKENFDNENWEDTWIYSKHPGKEFGKFVLTPGTFYNDAEADKGIQTSQDARFYAASRKFDG-FSNEDKPLVVQFSVKHEQNIDCGGGYVKLF---DCSLDQTDMHGESPYEIMFGPDICGPGTKKVHVIFSYKGKN------HLISKDIRCKDDVYTHFYTLIVRPDNTYEVLIDNEKVESGNLEDDWDFLAP 205
BLAST of FC868978 vs. ExPASy Swiss-Prot
Match: CALR3_MOUSE (Calreticulin-3 OS=Mus musculus GN=Calr3 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.491e-18 Identity = 63/175 (36.00%), Postives = 91/175 (52.00%), Query Frame = 3 Query: 174 ESFEGRWIVSQKDEYKGVWKHSKSE--GHE--DYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCGAT-NKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKAEGN 683 E + RW+ S D G ++ S + GH+ D GL + ++ YAI +P S K T+V+QY V+ + ++CGG Y+K P + K+ + +S Y IMFGPD CG KVH IL KN +Y H K P D TH+YT IL+PD + +DG+ G+ Sbjct: 31 ERWRNRWVQSTNDSQFGHFRVSSGKFYGHKEKDKGLQTTQNSRFYAISASF-KPFSNKGKTLVIQYTVKHEQKMDCGGGYIKVF-PSDLD--QKKMNGKSQYYIMFGPDICGFDIKKVHVILYFKN----QY--HENKKPIRCKVDGFTHLYTLILRPDLSYEVKVDGQSIESGS 195
BLAST of FC868978 vs. ExPASy Swiss-Prot
Match: CALR_MACFU (Calreticulin OS=Macaca fuscata fuscata GN=CALR PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.322e-18 Identity = 69/202 (34.16%), Postives = 98/202 (48.51%), Query Frame = 3 Query: 129 ISASDDATILYESF--DESFEGRWIVSQ--KDEYKGVWKHSKSEGHE--DYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCG-ATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKAEGNFLAADDFQPP 713 ++A++ A E F + + RWI S+ D K V K G E D GL + A+ YA+ EP S K T+V+Q+ V+ + ++CGG Y+K L P D+E Y IMFGPD CG T KVH I +K I ++ D+ TH+YT I++PDN + ID + G+ DF PP Sbjct: 14 LAAAEPAVYFKEQFLDGDGWTSRWIESKHKSDFGKFVLSSGKFYGDEEKDKGLQTSQDARFYALSASF-EPFSNKGQTLVVQFTVKHEQNIDCGGGYVK-LFPNSLDQTDMHGDSE--YNIMFGPDICGPGTKKVHVIFNYKG--KNVLINKDIR----CKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPP 205
BLAST of FC868978 vs. ExPASy Swiss-Prot
Match: CALR_MACFA (Calreticulin OS=Macaca fascicularis GN=CALR PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.322e-18 Identity = 69/202 (34.16%), Postives = 98/202 (48.51%), Query Frame = 3 Query: 129 ISASDDATILYESF--DESFEGRWIVSQ--KDEYKGVWKHSKSEGHE--DYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCG-ATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKAEGNFLAADDFQPP 713 ++A++ A E F + + RWI S+ D K V K G E D GL + A+ YA+ EP S K T+V+Q+ V+ + ++CGG Y+K L P D+E Y IMFGPD CG T KVH I +K I ++ D+ TH+YT I++PDN + ID + G+ DF PP Sbjct: 14 LAAAEPAVYFKEQFLDGDGWTSRWIESKHKSDFGKFVLSSGKFYGDEEKDKGLQTSQDARFYALSASF-EPFSNKGQTLVVQFTVKHEQNIDCGGGYVK-LFPNSLDQTDMHGDSE--YNIMFGPDICGPGTKKVHVIFNYKG--KNVLINKDIR----CKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPP 205 The following BLAST results are available for this feature:
BLAST of FC868978 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868978 ID=FC868978; Name=FC868978; organism=Citrus clementina; type=EST; length=720bpback to top |