FC868978
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868978 vs. ExPASy Swiss-Prot
Match: CALR_CERAE (Calreticulin OS=Cercopithecus aethiops GN=CALR PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.322e-18 Identity = 69/202 (34.16%), Postives = 98/202 (48.51%), Query Frame = 3 Query: 129 ISASDDATILYESF--DESFEGRWIVSQ--KDEYKGVWKHSKSEGHE--DYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCG-ATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKAEGNFLAADDFQPP 713 ++A++ A E F + + RWI S+ D K V K G E D GL + A+ YA+ EP S K T+V+Q+ V+ + ++CGG Y+K L P D+E Y IMFGPD CG T KVH I +K I ++ D+ TH+YT I++PDN + ID + G+ DF PP Sbjct: 14 LAAAEPAVYFKEQFLDGDGWTSRWIESKHKSDFGKFVLSSGKFYGDEEKDKGLQTSQDARFYALSASF-EPFSNKGQTLVVQFTVKHEQNIDCGGGYVK-LFPNSLDQTDMHGDSE--YNIMFGPDICGPGTKKVHVIFNYKG--KNVLINKDIR----CKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPP 205
BLAST of FC868978 vs. ExPASy Swiss-Prot
Match: CALR_CRIGR (Calreticulin OS=Cricetulus griseus GN=CALR PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.338e-18 Identity = 65/202 (32.18%), Postives = 97/202 (48.02%), Query Frame = 3 Query: 129 ISASDDATILYESF--DESFEGRWIVSQ--KDEYKGVWKHSKSEGHE--DYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCG-ATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKAEGNFLAADDFQPP 713 ++A++ A E F + + RW+ S+ D K V K G + D GL + A+ YA+ EP S K T+V+Q+ V+ + ++CGG Y+K K+ +S Y IMFGPD CG T KVH I +K I ++ D+ TH+YT I++PDN + ID + G+ DF PP Sbjct: 14 LAAAEPAVYFKEQFLDGDDWTNRWVESKHKSDFGKFVLSSGKFYGDQEKDKGLQTSQDARFYALSARF-EPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLF---PGSLDQKDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKG--KNVLINKDIR----CKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPP 205
BLAST of FC868978 vs. ExPASy Swiss-Prot
Match: CALR_RABIT (Calreticulin OS=Oryctolagus cuniculus GN=CALR PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.666e-18 Identity = 66/202 (32.67%), Postives = 97/202 (48.02%), Query Frame = 3 Query: 129 ISASDDATILYESF--DESFEGRWIVSQ--KDEYKGVWKHSKSEGHE--DYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCG-ATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKAEGNFLAADDFQPP 713 ++A++ E F + + RWI S+ D K V K G + D GL + A+ YA+ EP S K +V+Q+ V+ + ++CGG Y+K AG K+ +S Y IMFGPD CG T KVH I +K I ++ D+ TH+YT I++PDN + ID + G+ DF PP Sbjct: 14 LAAAEPVVYFKEQFLDGDGWTERWIESKHKSDFGKFVLSSGKFYGDQEKDKGLQTSQDARFYALSARF-EPFSNKGQPLVVQFTVKHEQNIDCGGGYVKLF---PAGLDQKDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKG--KNVLINKDIR----CKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPP 205
BLAST of FC868978 vs. ExPASy Swiss-Prot
Match: CALR_HUMAN (Calreticulin OS=Homo sapiens GN=CALR PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.665e-18 Identity = 68/202 (33.66%), Postives = 97/202 (48.02%), Query Frame = 3 Query: 129 ISASDDATILYESF--DESFEGRWIVSQ--KDEYKGVWKHSKSEGHE--DYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCG-ATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKAEGNFLAADDFQPP 713 ++ ++ A E F + + RWI S+ D K V K G E D GL + A+ YA+ EP S K T+V+Q+ V+ + ++CGG Y+K L P D+E Y IMFGPD CG T KVH I +K I ++ D+ TH+YT I++PDN + ID + G+ DF PP Sbjct: 14 LAVAEPAVYFKEQFLDGDGWTSRWIESKHKSDFGKFVLSSGKFYGDEEKDKGLQTSQDARFYALSASF-EPFSNKGQTLVVQFTVKHEQNIDCGGGYVK-LFPNSLDQTDMHGDSE--YNIMFGPDICGPGTKKVHVIFNYKG--KNVLINKDIR----CKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPP 205
BLAST of FC868978 vs. ExPASy Swiss-Prot
Match: CALR_BOVIN (Calreticulin OS=Bos taurus GN=CALR PE=1 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 9.665e-18 Identity = 66/202 (32.67%), Postives = 97/202 (48.02%), Query Frame = 3 Query: 129 ISASDDATILYESF--DESFEGRWIVSQK--DEYKGVWKHSKSEGHE--DYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCG-ATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKAEGNFLAADDFQPP 713 ++A+D E F + + RWI S+ D K V K G + D GL + A+ YA+ EP S K T+V+Q+ V+ + ++CGG Y+K AG + +S Y IMFGPD CG T KVH I +K I ++ D+ TH+YT I++P+N + ID + G+ DF PP Sbjct: 14 LAAADPTVYFKEQFLDGDGWTERWIESKHKPDFGKFVLSSGKFYGDQEKDKGLQTSQDARFYALSARF-EPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLF---PAGLDQTDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKG--KNVLINKDIR----CKDDEFTHLYTLIVRPNNTYEVKIDNSQVESGSLEDDWDFLPP 205
BLAST of FC868978 vs. ExPASy Swiss-Prot
Match: CALR3_BOVIN (Calreticulin-3 OS=Bos taurus GN=CALR3 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.796e-17 Identity = 62/175 (35.43%), Postives = 89/175 (50.86%), Query Frame = 3 Query: 174 ESFEGRWIVSQKDEYKGVWKHSKSE--GHE--DYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCGATNK-VHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKAEGN 683 E + RW+ S D G ++ S GH+ D GL + ++ YAI +P S K T+++QY V+ + ++CGG Y+K L P + K + +S Y IMFGPD CG K VH IL KN +Y H K D TH+YT +L+PD + IDG+ G+ Sbjct: 31 ERWRNRWVHSTNDSQFGHFRLSSGNFYGHKEKDKGLQTTQNSRFYAISARF-KPFSNKGKTLIIQYTVKHEQKMDCGGGYIK-LFPADVD--QKNLNGKSQYYIMFGPDICGFDIKTVHVILHFKN----QY--HANKKSIRCKVDSFTHLYTLVLRPDLTYEVKIDGQSIESGS 195
BLAST of FC868978 vs. ExPASy Swiss-Prot
Match: CALR3_HUMAN (Calreticulin-3 OS=Homo sapiens GN=CALR3 PE=1 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 8.182e-17 Identity = 62/175 (35.43%), Postives = 85/175 (48.57%), Query Frame = 3 Query: 174 ESFEGRWIVSQKDEYKGVWKHSKSE--GHE--DYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCG-ATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKAEGN 683 E + RW+ S D G ++ S + GH+ D GL + + YAI +P S K T+V+QY V+ + ++CGG Y+K A K + +S Y IMFGPD CG KVH IL KN H K D TH+YT IL+PD + IDG+ G+ Sbjct: 31 EHWRNRWLQSTNDSRFGHFRLSSGKFYGHKEKDKGLQTTQNGRFYAISARF-KPFSNKGKTLVIQYTVKHEQKMDCGGGYIKVF---PADIDQKNLNGKSQYYIMFGPDICGFDIKKVHVILHFKNK------YHENKKLIRCKVDGFTHLYTLILRPDLSYDVKIDGQSIESGS 195 The following BLAST results are available for this feature:
BLAST of FC868978 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868978 ID=FC868978; Name=FC868978; organism=Citrus clementina; type=EST; length=720bpback to top |