FC868982

Overview
NameFC868982
Unique NameFC868982
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length658
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868982 vs. ExPASy Swiss-Prot
Match: 6PGL_STRCO (6-phosphogluconolactonase OS=Streptomyces coelicolor GN=pgl PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.250e-14
Identity = 50/141 (35.46%), Postives = 76/141 (53.90%), Query Frame = 3
Query:  225 KGSFTVVLSGGSLIDSL-RKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDA-----LSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLR 629
            +GS +VVL+GG   + L   L   P  D+I+W++  ++W DER +P+   + N   A    L  VP+    V+A+  +        E AA  Y    + L  +++    AA   P FD++LLG+GPD H+ASLFP HP +R
Sbjct:   35 RGSASVVLTGGRNGNGLLAALAGSPARDAIDWSRLDLWWGDERFLPEGDPERNVTQAQQALLDSVPLDPKRVHAMAASDGPYGSDVEAAAAAYA---QELATASVPENHAAV--PSFDVLLLGVGPDTHVASLFPEHPGVR 170          
BLAST of FC868982 vs. ExPASy Swiss-Prot
Match: 6PGL_DROME (Probable 6-phosphogluconolactonase OS=Drosophila melanogaster GN=CG17333 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.693e-13
Identity = 53/156 (33.97%), Postives = 75/156 (48.08%), Query Frame = 3
Query:  156 SEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSA-EGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHP 620
            SEE L  +L       S +   +   F+V LSGGSL+  L K ++     +++ AKW  F+ DER V  D  DS Y      +L+++P    + +   D     +  A DYE  +K             +   +FDL+LLGMGPDGH  SLFP  P
Sbjct:   15 SEEQLVQALGDLLQRCSQEALAKHDKFSVGLSGGSLVQLLTKALKSC---NLKTAKWVFFFCDERYVRLDDSDSTYGAYRAEWLTQLPCIQESQFVRADTSQPLDACAADYEAKVK-------------SQVDRFDLLLLGMGPDGHTCSLFPEQP 154          
BLAST of FC868982 vs. ExPASy Swiss-Prot
Match: 6PGL_PSEPU (6-phosphogluconolactonase OS=Pseudomonas putida GN=pgl PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.329e-12
Identity = 57/154 (37.01%), Postives = 70/154 (45.45%), Query Frame = 3
Query:  168 LAVSLAKYTADLSAKFGKEKGSFTVVLSGG-SLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLL 626
            LA +LA   A+        KG   VVLSGG S +  L KL   P    ++WAK  V   DER VP +H DSN  L     L+        V     A + + AA              + A  A TG P  D+++LGMG DGH ASLFP  P L
Sbjct:   28 LAATLAHDVAERLRAAIAAKGQACVVLSGGRSPVPFLEKLASEP----LDWAKVTVSLADERWVPVEHADSNAGLLARHLLTGAAAKARFVGLYQQAENLDAAA--------------LKADQALTGLPPIDVLVLGMGDDGHTASLFPASPNL 163          
BLAST of FC868982 vs. ExPASy Swiss-Prot
Match: G6PE_MOUSE (GDH/6PGL endoplasmic bifunctional protein OS=Mus musculus GN=H6pd PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.510e-11
Identity = 51/154 (33.12%), Postives = 76/154 (49.35%), Query Frame = 3
Query:  162 EDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSL-IDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHP 620
            E+L   LA      + +  +  G F + LSGGS  I   ++L    Y  S  WA  H++ VDER VP    DSN++      L  V +   N++ +   L     AE+ +    + ++ + L  +++     FDL+LLGMG DGH ASLFP  P
Sbjct:  559 EELISKLASDIEAAAVQAVRHFGKFHLALSGGSSPIALFQQLATGHY--SFPWAHTHLWLVDERCVPLSDPDSNFQGLQAHLLQHVRVPYYNIHPMPVHLHQRLCAEEDQGAQTYASEISALVANSS-----FDLVLLGMGTDGHTASLFPQSP 705          
BLAST of FC868982 vs. ExPASy Swiss-Prot
Match: SOL4_YEAST (6-phosphogluconolactonase 4 OS=Saccharomyces cerevisiae GN=SOL4 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.575e-11
Identity = 55/170 (32.35%), Postives = 79/170 (46.47%), Query Frame = 3
Query:  141 VQVFDSEEDLAVSLAKYTADL--SAKFGKEKGSFTVVLSGGSLIDSL-RKLVEPPYV-DSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGN-------VYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFP-KFDLMLLGMGPDGHIASLFPG 614
            +Q F  ++ L     K+  +   SA  G     F + +SGGS+  +L   LV    +   I+W +W +F+ DER+VP +   SNY       L  + +  GN       VY IN++L   G            T +  +A   A+  P  FDL+LLG G DGH  SLFPG
Sbjct:    4 LQRFSEKKSLIHEFGKFILEKQESALTGDADAVFNIAISGGSMNQALYESLVNDKNIFPHIKWPQWRIFFCDERLVPFEDPQSNYGQFKKTVLDPL-VHQGNQLNLGPTVYTINESLIGGGE-----------TANRKIAEEYASMLPASFDLILLGCGEDGHTCSLFPG 161          
The following BLAST results are available for this feature:
BLAST of FC868982 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
6PGL_STRCO3.250e-1435.466-phosphogluconolactonase OS=Streptomyces coelicol... [more]
6PGL_DROME4.693e-1333.97Probable 6-phosphogluconolactonase OS=Drosophila m... [more]
6PGL_PSEPU2.329e-1237.016-phosphogluconolactonase OS=Pseudomonas putida GN... [more]
G6PE_MOUSE1.510e-1133.12GDH/6PGL endoplasmic bifunctional protein OS=Mus m... [more]
SOL4_YEAST2.575e-1132.356-phosphogluconolactonase 4 OS=Saccharomyces cerev... [more]

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Properties
Property NameValue
Genbank descriptionC31007C05EF AbioticL1 Citrus clementina cDNA clone C31007C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868982 ID=FC868982; Name=FC868982; organism=Citrus clementina; type=EST; length=658bp
AGTTACTCAGAAGACCAAACTCTCTCCTCCAATTTCGAAACATTTCCCTT
AATCGGAACAAATCATCGGACTGCGTGAGAATCAAGGCATCATCATCATC
ATCATCAATGGCTGCCGAGAATAAGAACAAGAACAAGAACGTACAGGTTT
TTGACTCAGAGGAAGATCTGGCTGTGTCTTTGGCCAAATACACCGCCGAC
CTATCTGCCAAGTTCGGTAAAGAGAAGGGCTCCTTCACTGTCGTCTTATC
CGGTGGTTCTCTCATCGACTCCCTCAGGAAATTAGTGGAACCCCCGTATG
TAGATTCAATTGAATGGGCGAAATGGCATGTGTTTTGGGTTGATGAAAGA
GTTGTTCCCAAGGATCATGATGATAGCAATTATAAGCTTGCTTATGATGG
TTTCCTTTCTAAGGTACCAATTACCACTGGCAATGTCTATGCCATCAATG
ATGCATTATCTGCTGAAGGTGCAGCTGAAGATTATGAGACTTGTCTCAAG
CATTTGACAAAGAGCAATATATTAGCTACATCTGCTGCTACTGGTTTTCC
AAAGTTTGATCTCATGCTTCTGGGTATGGGTCCAGATGGACATATAGCTT
CTCTGTTTCCAGGGCATCCTCTTCTCAGGAGAATGAAAATGGGTTACTTT
CATTAAGA
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