FC868986
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868986 vs. ExPASy Swiss-Prot
Match: YTM1_ASPFC (Ribosome biogenesis protein ytm1 OS=Aspergillus fumigatus (strain CEA10 / CBS 144.89 / FGSC A1163) GN=ytm1 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.719e-20 Identity = 68/194 (35.05%), Postives = 104/194 (53.61%), Query Frame = 1 Query: 145 RRVQVRFKTKLKPPQKVPSNS--IAIPSNLTRFGLSSVVNNLLQAVNPEWKSEPFDFLVNGELVRMSLEQFLLAKGISAEKVLEIEYIKAVAPQKEEEPSLHDDWVSAVD---GSNPGF-------------ILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVT---VATGFKDQTLRLWK 663 R+V+V+ +K + +P N+ I +P++L R+ LS++VN LL P PF+FL+NG +R S++++L A GISAE LEIEY++A+ P HDDWVS+ D ++P IL+G YD L RVW + + I+ A + K+VT +A+ D+T+RLWK Sbjct: 18 RQVRVQLTSK-QEDIALPDNTGPILVPTSLRRYALSTLVNKLLGNDKPI----PFEFLINGTFLRTSIDEYLTANGISAETTLEIEYVRALIPPLHIASFQHDDWVSSTDVLSATSPAATWASATISQGQEKILSGSYDGLLRVW---NMSSQIVATSPAAADGGHTASIKAAKFVTPNQIASAGLDRTVRLWK 203
BLAST of FC868986 vs. ExPASy Swiss-Prot
Match: YTM1_ASPNC (Ribosome biogenesis protein ytm1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=ytm1 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.857e-20 Identity = 72/218 (33.03%), Postives = 106/218 (48.62%), Query Frame = 1 Query: 91 GQMDMNIETPEDQNEENSRRVQVRFKTK-LKPPQKVPSNSIAIPSNLTRFGLSSVVNNLLQAVNPEWKSEPFDFLVNGELVRMSLEQFLLAKGISAEKVLEIEYIKAVAPQKEEEPSLHDDWVSAVD--------------GSNPG--FILTGCYDNLGRVWKAGGVCTHILE-----GHCGAVSSVNIIKSDGLKYVTVATGFKDQTLRLWKVDAEE 678 G D Q+ + RVQ+ K + + P+ + I +P+ L R+ LS++VNNLL P PF+FL+NG +R S++++L A GISAE LEIEYI+A+ P HDDWV +VD +PG IL+G YD L RVW GH ++ + I + + V+ G D+T+RLWK + + Sbjct: 3 GVQDSTSAAASSQSAQRQVRVQLVSKQEDIALPES--TGPILVPTGLRRYALSTLVNNLLGNDKPV----PFEFLINGAFLRTSIDEYLTANGISAETTLEIEYIRALIPPLHIASFEHDDWVGSVDVLSATSLATSWASAVVSPGQERILSGSYDGLLRVWNMSSQIVATSPSPADGGHGASIKAAKFISPNSI----VSAGL-DRTVRLWKYNESD 209
BLAST of FC868986 vs. ExPASy Swiss-Prot
Match: YTM1_ASPCL (Ribosome biogenesis protein ytm1 OS=Aspergillus clavatus GN=ytm1 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.857e-20 Identity = 63/176 (35.80%), Postives = 91/176 (51.70%), Query Frame = 1 Query: 208 IAIPSNLTRFGLSSVVNNLLQAVNPEWKSEPFDFLVNGELVRMSLEQFLLAKGISAEKVLEIEYIKAVAPQKEEEPSLHDDWVSAVD--------------GSNPG--FILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVT---VATGFKDQTLRLWKVDAEE 678 I +P+ L R+ LS++VNNLL P PF+FL+NG +R S++++L A GISAE LEIEY++A+ P HDDWVS+ D +PG IL+G YD L RVW + + ++ A + K+VT + + D+T+RLWK E Sbjct: 40 ILVPTGLRRYALSTLVNNLLSNDKPI----PFEFLINGTFLRTSIDEYLTANGISAETTLEIEYVRALIPPLHIASFQHDDWVSSTDVLSATSPAATWASAAISPGQERILSGSYDGLLRVW---NMSSQVVATSPPAADGGHAASIKAAKFVTPNQIVSAGLDRTVRLWKYSESE 208
BLAST of FC868986 vs. ExPASy Swiss-Prot
Match: YTM1_NEUCR (Ribosome biogenesis protein ytm-1 OS=Neurospora crassa GN=ytm-1 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.344e-20 Identity = 67/199 (33.67%), Postives = 103/199 (51.76%), Query Frame = 1 Query: 124 DQNEENSRRVQVRFKTKLKPPQKVPSN-SIAIPSNLTRFGLSSVVNNLLQAVNPEWKSEPFDFLVNGELVRMSLEQFLLAKGISAEKVLEIEYIKAVAPQKEEEPSLHDDWVSAVD------------GSN----PGFILTGCYDNLGRVWKAGG--VCTHILEGHCGAVSSVNIIKSDGLKYVTVATGFKDQTLRLWK 663 D E+ +V+V F T+ + Q S + +P+++ R+GLS ++N+ + S PFDFLVNG +R SLE++L A G+S E + ++Y++++ P E HDDWVSAVD G N IL+ YD L R+W A G + T H G +S+ K L +A+ D+T+R+WK Sbjct: 2 DHPTESGAQVRVTFTTQEEDIQLDESKRQLLVPADIRRYGLSRILNSESML---DTNSIPFDFLVNGSFLRGSLEEYLNANGLSLETNITLQYVRSLIPPTYEASFEHDDWVSAVDVLSATSPAGRWSGDNFQRGQDRILSASYDGLLRIWDASGNVIGTSPSGSHGGHTASIKAAKF--LSSTQIASAGMDRTVRVWK 195
BLAST of FC868986 vs. ExPASy Swiss-Prot
Match: YTM1_BOTFB (Ribosome biogenesis protein ytm1 OS=Botryotinia fuckeliana (strain B05.10) GN=ytm1 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.082e-19 Identity = 66/197 (33.50%), Postives = 101/197 (51.27%), Query Frame = 1 Query: 148 RVQVRFKTKLKPPQKVPSNS--IAIPSNLTRFGLSSVVNNLLQAVNPEWKSEPFDFLVNGELVRMSLEQFLLAKGISAEKVLEIEYIKAVAPQKEEEPSLHDDWVSAVD---GSNPG-------------FILTGCYDNLGRVWKAGG--VCTHILEGHCGAVSSVNIIKSDGLKYVTVATGFKDQTLRLWKVDAEE 678 +VQV F T P ++P + +P+N+ R+GLS ++N+ +A+ PFDFL+NG +R +L+++L A G+S+E L ++Y++++ P E HDDWVS+VD GS+ IL+G YD L RVW G + T G S V K L VA+ D+T+R+W E Sbjct: 5 QVQVHFSTT-SPDIELPEGKQQLLVPTNVRRYGLSQILNS--EAMLDTSSPIPFDFLINGTFLRTTLDEYLTANGLSSETTLNLQYVRSLIPPLYEASFEHDDWVSSVDVLSGSSAAGAWGKNSIVEGQERILSGSYDGLLRVWNKSGQAIATSAPASIGGHTSGVKAAK--WLSARQVASAGLDRTIRIWNYSESE 196
BLAST of FC868986 vs. ExPASy Swiss-Prot
Match: YTM1_ASPTN (Ribosome biogenesis protein ytm1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=ytm1 PE=3 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 1.082e-19 Identity = 69/196 (35.20%), Postives = 104/196 (53.06%), Query Frame = 1 Query: 145 RRVQVRFKTKLKPPQKVPSNS--IAIPSNLTRFGLSSVVNNLLQAVNPEWKSEPFDFLVNGELVRMSLEQFLLAKGISAEKVLEIEYIKAVAPQKEEEPSLHDDWVSAVD---GSNPGF-------------ILTGCYDNLGRVWKAGG--VCTHILE---GHCGAVSSVNIIKSDGLKYVTVATGFKDQTLRLWK 663 R+V+V+ +K + +P ++ I IP+ L R+ LS++VNNLL P PF+FL+NG +R S++++L A GISAE LEIEY++A+ P HDDWVS+VD ++P IL+G YD RVW V T GH ++ + + + + V+ G D+T+RLWK Sbjct: 12 RQVRVQLTSK-QEDIALPEDTGPILIPTGLRRYALSTLVNNLLGNEKPI----PFEFLINGAFLRTSIDEYLTANGISAETTLEIEYVRALIPPLHIASFEHDDWVSSVDVLSATSPAASWASASVPQGQERILSGSYDGFLRVWNMSSQVVATSPAATEGGHTASIKAAKFVSPNSI----VSAGL-DRTVRLWK 197
BLAST of FC868986 vs. ExPASy Swiss-Prot
Match: WDR12_ANOGA (Ribosome biogenesis protein WDR12 homolog OS=Anopheles gambiae GN=AGAP007244 PE=3 SV=3) HSP 1 Score: 97.0561 bits (240), Expect = 1.082e-19 Identity = 63/173 (36.42%), Postives = 94/173 (54.34%), Query Frame = 1 Query: 148 RVQVRFKTKLKPPQKVPSNSIAIPSNLTRFGLSSVVNNLLQ-AVNPEWKSEPFDFLVNGELVRMSLEQFLLAKGISAEKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATGFKDQTLRLWK 663 ++QV F TK K VP +I +N+ L++++ +L+ A N + FDFL+NGE VR +L Q L + IS E +E+EY++ + ++ LHDDWVSAV + G+ILTG YDN +W G + GH AV V I + V A+ DQT+ +W+ Sbjct: 12 QLQVHFTTKQKQ-YAVPDVPYSIRANVGCSELNTLLGTVLKDAGNKQGAKVAFDFLLNGEFVRSTLSQHLKERDISFEDTIELEYVERYPAPQPQDCLLHDDWVSAVQAKD-GWILTGTYDNTVNLWNTKGKHKLTIPGHVAAVKGVAWISLNEQTGV-FASASHDQTIMIWE 181
BLAST of FC868986 vs. ExPASy Swiss-Prot
Match: YTM1_PYRTR (Ribosome biogenesis protein ytm1 OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP) GN=ytm1 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.413e-19 Identity = 71/197 (36.04%), Postives = 102/197 (51.78%), Query Frame = 1 Query: 148 RVQVRFKTKLKPPQ-KVPSNSIAIPSNLTRFGLSSVVNNLLQAVNPEWKSEPFDFLVNGELVRMSLEQFLLAKGISAEKVLEIEYIKAVAPQKEEEPSLHDDWVSAVD-----GSNPGFILTGCYDNLGRVWKAGG--VCTHILEGHCGAVSSVNIIKSDGLKYVTVATGFKDQTLRLWKVD--------AEELVNH 690 +VQ+R T+ Q N + + ++LTR LS++VN LL + PFD L+NGE +R ++++FL GI+AE L++EY +A+ P HDDWVSAVD S IL+ YD L RVW G + T + G ++S+ K K + VA G D +R++K D A ELVNH Sbjct: 9 KVQIRLTTRDSSLQISEEPNVLLVQTSLTRHKLSTLVNELLH--RGDETRIPFDILINGEFLRTTIDEFLTKNGINAESTLDVEYTRALVPPLNVTSFEHDDWVSAVDVLSGVQSGQERILSASYDGLVRVWNTSGDVLATSEAPNNGGRITSLKTAKWLSEKKM-VAAGL-DNNVRVYKYDDDARTIITALELVNH 201
BLAST of FC868986 vs. ExPASy Swiss-Prot
Match: YTM1_DEBHA (Ribosome biogenesis protein YTM1 OS=Debaryomyces hansenii GN=YTM1 PE=3 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.846e-19 Identity = 61/197 (30.96%), Postives = 99/197 (50.25%), Query Frame = 1 Query: 136 ENSRRVQVRFKTKLKPPQKVPSNS-IAIPSNLTRFGLSSVVNNLLQ--AVNPEWKSEPFDFLVNGELVRMSLEQFLLAKGISAEKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNP--------------GFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATGFKDQTLRLWKVDAE 675 ++ ++++ F T + S++ + +P +L R+GLS +VN+LL+ E K PFDFL++G L+R SLE +L+ G+S+E L +EY +AV P +DDW+S++D NP IL+G YD + R + G GH G + SV I + + D+ +RLWK + Sbjct: 3 DDKSQIKINFFTNEEDESLHTSDAPLYVPVSLKRYGLSEIVNHLLKKDGETDETKPVPFDFLIDGVLLRTSLEDYLVKNGLSSEASLNLEYTRAVLPPSFLASFNNDDWISSLDTINPLSASVKASNMSISQPKILSGSYDGIVRTYNMSGKVEKQYVGHSGPIRSVKWISP-----TRIVSSGNDRQVRLWKTSID 194
BLAST of FC868986 vs. ExPASy Swiss-Prot
Match: YTM1_SCLS1 (Ribosome biogenesis protein ytm1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=ytm1 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.112e-19 Identity = 65/197 (32.99%), Postives = 100/197 (50.76%), Query Frame = 1 Query: 148 RVQVRFKTKLKPPQKVPSNS--IAIPSNLTRFGLSSVVNNLLQAVNPEWKSEPFDFLVNGELVRMSLEQFLLAKGISAEKVLEIEYIKAVAPQKEEEPSLHDDWVSAVD----GSNPGF------------ILTGCYDNLGRVWKAGG--VCTHILEGHCGAVSSVNIIKSDGLKYVTVATGFKDQTLRLWKVDAEE 678 +VQV F T P ++P + +P+N+ R+GLS ++N+ +A+ PFDFL+NG +R +L+++L A G+S+E L ++Y++++ P E HDDWVS+VD S G IL+G YD L RVW G + T G S V K L +A+ D+T+R+W E Sbjct: 5 QVQVYFTTT-SPDIQLPEEKQQLLVPTNVRRYGLSQILNS--EAMLDTSSPIPFDFLINGTFLRTTLDEYLTANGLSSETTLNLQYVRSLIPPLYEASFEHDDWVSSVDVYSGSSAVGIWGSSSVEAGQERILSGSYDGLLRVWNKSGQAIATSAPASAGGHTSGVKSAKF--LSTKQIASAGLDRTIRIWNYSEAE 196 The following BLAST results are available for this feature:
BLAST of FC868986 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868986 ID=FC868986; Name=FC868986; organism=Citrus clementina; type=EST; length=736bpback to top |