FC868986
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868986 vs. ExPASy Swiss-Prot
Match: WDR12_DROER (Ribosome biogenesis protein WDR12 homolog OS=Drosophila erecta GN=GG10358 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.546e-18 Identity = 65/177 (36.72%), Postives = 91/177 (51.41%), Query Frame = 1 Query: 133 EENSRRVQVRFKTKLKPPQKVPSNSIAIPSNLTRFGLSSVVNNLLQAVNPEWKSEPFDFLVNGELVRMSLEQFLLAKGISAEKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATGFKDQTLRLWK 663 E +VQV KTK + VP AI +T L++ VN LL+ + ++ FDFLV E +R L L K IS E +EIEY++ + ++ LHDDWVSAV S +IL+GCYDN +W G + GH + +V+ I D V+T +DQT LW+ Sbjct: 4 ENGEGQVQVHLKTK-QEHYAVPDVPYAIDGTVTTVELNTFVNALLRQKDGSSDTD-FDFLVFDEYLRGRLCDHLREKAISFEDAIEIEYVERFPAPEPQDCLLHDDWVSAVKASGK-WILSGCYDNTLNLWTNKGKHILTISGHTAPIKAVDWISLDEETGRFVSTS-QDQTAMLWQ 176
BLAST of FC868986 vs. ExPASy Swiss-Prot
Match: WDR12_CULQU (Ribosome biogenesis protein WDR12 homolog OS=Culex quinquefasciatus GN=CPIJ001500 PE=3 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 4.546e-18 Identity = 64/173 (36.99%), Postives = 93/173 (53.76%), Query Frame = 1 Query: 148 RVQVRFKTKLKPPQKVPSNSIAIPSNLTRFGLSSVVNNLLQ-AVNPEWKSEPFDFLVNGELVRMSLEQFLLAKGISAEKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATGFKDQTLRLWK 663 ++Q+ TK K VP +I +N++ L+ +VN LL+ A N E FDFL+NGE L Q L + +S E +E+EY++ + ++ LHDDWVSAV+ + +ILTGCYDN +W G + GH V V I D K V A+ +DQT+ LW+ Sbjct: 12 QLQLHLITKQKQ-FAVPDVPYSIRANVSTKELNVLVNTLLKDAGNAEAGKVEFDFLLNGEF---PLGQHLKERDVSFEDTVELEYVERYPAPEPQDCLLHDDWVSAVE-ARDNWILTGCYDNTLNLWTTKGKHKLTIPGHIAPVKGVTWISLDEEKGV-FASASQDQTVMLWE 178
BLAST of FC868986 vs. ExPASy Swiss-Prot
Match: WDR12_TRIAD (Ribosome biogenesis protein WDR12 homolog OS=Trichoplax adhaerens GN=TRIADDRAFT_55049 PE=3 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 5.938e-18 Identity = 59/181 (32.60%), Postives = 91/181 (50.28%), Query Frame = 1 Query: 124 DQNEENSRRVQVRFKTKLKPPQKVPSNSIAIPSNLTRFGLSSVVNNLLQAVNPEWK-SEPFDFLVNGELVRMSLEQFLLAKGISAEKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATGFKDQTLRLWK 663 + ++ +S+++Q+R L N +++PS LS V+ LL A + E S FDF +N +L+R SLE ++ +K +S E V+E+ Y + P LH DW+ +V S IL G D R+W G I +GH V+ V I D + T+ T +D TLRLW+ Sbjct: 4 ENDKTSSKQLQIRL-VALNKRFDTSGNLLSLPSRFGCDELSETVHTLLSANDIEIPASVQFDFAINNDLLRDSLEGYVTSKNLSTESVIEVVYFQKEPPPDFLNTILHSDWIKSV-RSKDDCILAGSLDGTARIWNMAGEEYAIFKGHESYVNGVEWISKDN-NHATIVTASQDGTLRLWE 181
BLAST of FC868986 vs. ExPASy Swiss-Prot
Match: WDR12_DROVI (Ribosome biogenesis protein WDR12 homolog OS=Drosophila virilis GN=GJ17641 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.755e-18 Identity = 64/177 (36.16%), Postives = 89/177 (50.28%), Query Frame = 1 Query: 133 EENSRRVQVRFKTKLKPPQKVPSNSIAIPSNLTRFGLSSVVNNLLQAVNPEWKSEPFDFLVNGELVRMSLEQFLLAKGISAEKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATGFKDQTLRLWK 663 E +VQV KTK + VP AI +++ L+ +N LLQ+ E FDFLV E +R L L K IS E ++IEY++ + ++ LHDDWVSAV +ILTGCYDN +W G + GH + +V+ I D V+T +DQT LW+ Sbjct: 4 ENGEGQVQVHLKTK-QEHYAVPDVPYAIDGSVSTTELNIFLNALLQSKGAE--GVDFDFLVFDEYLRGRLCDHLREKAISFEDAIDIEYVERFPAPEPQDCLLHDDWVSAVKACGK-WILTGCYDNTINIWTNKGKHKLTIPGHTAPIKAVDWISMDDENGRFVSTS-QDQTAMLWQ 175
BLAST of FC868986 vs. ExPASy Swiss-Prot
Match: WDR12_DROSI (Ribosome biogenesis protein WDR12 homolog OS=Drosophila simulans GN=GD22226 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.755e-18 Identity = 65/172 (37.79%), Postives = 89/172 (51.74%), Query Frame = 1 Query: 148 RVQVRFKTKLKPPQKVPSNSIAIPSNLTRFGLSSVVNNLLQAVNPEWKSEPFDFLVNGELVRMSLEQFLLAKGISAEKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATGFKDQTLRLWK 663 +VQV KTK + VP AI +T L++ VN LL+ + +E FDFLV E +R L L K IS E +EIEY++ + ++ LHDDWVSAV +IL+GCYDN +W G + GH + +V+ I D V+T +DQT LWK Sbjct: 9 QVQVHLKTK-QEHYAVPDVPYAIDGTVTTVELNTFVNALLRQKDGSSDTE-FDFLVFDEYLRGRLCDHLREKAISFEDAIEIEYVERFPAPEPQDCLLHDDWVSAVKARGK-WILSGCYDNSLNLWTNKGKHILTISGHTAPIKAVDWISLDEETGRFVSTS-QDQTAMLWK 176
BLAST of FC868986 vs. ExPASy Swiss-Prot
Match: WDR12_DROSE (Ribosome biogenesis protein WDR12 homolog OS=Drosophila sechellia GN=GM11446 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.323e-17 Identity = 64/172 (37.21%), Postives = 89/172 (51.74%), Query Frame = 1 Query: 148 RVQVRFKTKLKPPQKVPSNSIAIPSNLTRFGLSSVVNNLLQAVNPEWKSEPFDFLVNGELVRMSLEQFLLAKGISAEKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATGFKDQTLRLWK 663 +VQV KTK + VP AI +T L++ VN LL+ + ++ FDFLV E +R L L K IS E +EIEY++ + ++ LHDDWVSAV +IL+GCYDN +W G + GH + +V+ I D V+T +DQT LWK Sbjct: 9 QVQVHLKTK-QEQYAVPDVPYAIDGTVTTVELNTFVNALLRQKDGSSDTD-FDFLVFDEYLRGRLCDHLREKAISFEDAIEIEYVERFPAPEPQDCLLHDDWVSAVKARGK-WILSGCYDNSLNLWTNKGKHILTISGHTAPIKAVDWISLDEETGRFVSTS-QDQTAMLWK 176
BLAST of FC868986 vs. ExPASy Swiss-Prot
Match: WDR12_DROPS (Ribosome biogenesis protein WDR12 homolog OS=Drosophila pseudoobscura pseudoobscura GN=GA19813 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.256e-17 Identity = 64/172 (37.21%), Postives = 88/172 (51.16%), Query Frame = 1 Query: 148 RVQVRFKTKLKPPQKVPSNSIAIPSNLTRFGLSSVVNNLLQAVNPEWKSEPFDFLVNGELVRMSLEQFLLAKGISAEKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATGFKDQTLRLWK 663 +VQV KTK + VP AI +T L++ VN LL + + FDFLV E +R L L K IS E +EIEY++ + ++ LHDDWVSAV S +ILTGCYDN +W G + GH + +V+ I D V++ +DQT LW+ Sbjct: 9 QVQVHLKTK-QEHYAVPDVPYAIDGTVTTAELNTFVNALLLSKGSS--AVDFDFLVFDEYLRGRLCDHLREKAISFEDAIEIEYVERFPAPEPQDCLLHDDWVSAVKASGK-WILTGCYDNTLNIWTNKGKHILTIPGHTAPIKAVDWISLDDDTGRFVSSS-QDQTAMLWQ 175
BLAST of FC868986 vs. ExPASy Swiss-Prot
Match: WDR12_DROPE (Ribosome biogenesis protein WDR12 homolog OS=Drosophila persimilis GN=GL26386 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.256e-17 Identity = 64/172 (37.21%), Postives = 88/172 (51.16%), Query Frame = 1 Query: 148 RVQVRFKTKLKPPQKVPSNSIAIPSNLTRFGLSSVVNNLLQAVNPEWKSEPFDFLVNGELVRMSLEQFLLAKGISAEKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATGFKDQTLRLWK 663 +VQV KTK + VP AI +T L++ VN LL + + FDFLV E +R L L K IS E +EIEY++ + ++ LHDDWVSAV S +ILTGCYDN +W G + GH + +V+ I D V++ +DQT LW+ Sbjct: 9 QVQVHLKTK-QEHYAVPDVPYAIDGTVTTAELNTFVNALLLSKGSS--AVDFDFLVFDEYLRGRLCDHLREKAISFEDAIEIEYVERFPAPEPQDCLLHDDWVSAVKASGK-WILTGCYDNTLNIWTNKGKHILTIPGHTAPIKAVDWISLDDDTGRFVSSS-QDQTAMLWQ 175
BLAST of FC868986 vs. ExPASy Swiss-Prot
Match: WDR12_DROME (Ribosome biogenesis protein WDR12 homolog OS=Drosophila melanogaster GN=CG6724 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.849e-17 Identity = 63/172 (36.63%), Postives = 89/172 (51.74%), Query Frame = 1 Query: 148 RVQVRFKTKLKPPQKVPSNSIAIPSNLTRFGLSSVVNNLLQAVNPEWKSEPFDFLVNGELVRMSLEQFLLAKGISAEKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATGFKDQTLRLWK 663 +VQV KTK + VP AI +T L++ VN LL+ + ++ FDFLV E +R L L K IS E +EIEY++ + ++ LHDDWVSAV +IL+GCYDN +W G + GH + +V+ I D V+T +DQT LW+ Sbjct: 9 QVQVHLKTK-QEHYAVPDVPYAIDGTVTTVELNTFVNALLRQKDGSSDTD-FDFLVFDEYLRGRLCDHLREKAISFEDAIEIEYVERFPAPEPQDCLLHDDWVSAVKARGK-WILSGCYDNTLNLWTNKGKHILTISGHTAPIKAVDWISLDEETGRFVSTS-QDQTAMLWQ 176
BLAST of FC868986 vs. ExPASy Swiss-Prot
Match: YTM1_PHANO (Ribosome biogenesis protein YTM1 OS=Phaeosphaeria nodorum GN=YTM1 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.463e-16 Identity = 67/202 (33.17%), Postives = 99/202 (49.01%), Query Frame = 1 Query: 133 EENSRRVQVRFKTK---LKPPQKVPSNSIAIPSNLTRFGLSSVVNNLLQAVNPEWKSEPFDFLVNGELVRMSLEQFLLAKGISAEKVLEIEYIKAVAPQKEEEPSLHDDWVSAVD----------------GSNPGFILTGCYDNLGRVWKAGG--VCTHILEGHCGAVSSVNIIKSDGLKYVTVATGFKDQTLRLWKVDAE 675 E + +V RF T+ L P + ++ I +NL R LS ++N LL E PFD L+NG+ +R +++++L GI+AE LE+EY +A+ P HDDWVSAVD S IL+ YD L RVW G + T + G ++S+ K K + VA G D T+R++K D + Sbjct: 4 EISDTKVTARFTTRDENLHLPDQ--DRTLLISTNLKRVNLSKILNELL---GREDDRIPFDILINGQFLRTTVDEYLTKNGINAETRLEVEYTRALVPPLNVTSFEHDDWVSAVDVLSQTSRAGAWSGGSVQSGQERILSASYDGLVRVWNTSGDVLATSEAPNNGGRITSLKSAKWLSDKKI-VAAGM-DNTVRVFKYDED 198 The following BLAST results are available for this feature:
BLAST of FC868986 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868986 ID=FC868986; Name=FC868986; organism=Citrus clementina; type=EST; length=736bpback to top |