FC869034

Overview
NameFC869034
Unique NameFC869034
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: PIP1_ATRCA (Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 4.580e-75
Identity = 135/198 (68.18%), Postives = 150/198 (75.76%), Query Frame = 3
Query:   51 EVAEQQGGGDEFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSH 644
            EV  ++G   +   KDY DPPPAP  D  EL  WSF+RA IAEFIA            IGYK +TDP      C  VG+LGIAW+FGGMIF+LVYCTAGISGGHINPAVTFGLFL RKVSL+RAL+YM+AQC GAICG G VKAF K  YN++GGGAN +A GYNKGT  GAE+IGTFVLVYTVFSATDPKRSARDSH
Sbjct:    4 EVISEEGQVHQHG-KDYVDPPPAPFFDMGELKLWSFWRAAIAEFIATLLFLYITVATVIGYKKETDP------CASVGLLGIAWSFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLLRALVYMIAQCAGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTAFGAELIGTFVLVYTVFSATDPKRSARDSH 194          

HSP 2 Score: 32.7278 bits (73), Expect = 4.580e-75
Identity = 15/19 (78.95%), Postives = 15/19 (78.95%), Query Frame = 2
Query:  653 LGTTPIGVAVFMVHLATIP 709
            L   PIG AVFMVHLATIP
Sbjct:  198 LAPLPIGFAVFMVHLATIP 216          
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2)

HSP 1 Score: 261.922 bits (668), Expect = 1.579e-72
Identity = 135/198 (68.18%), Postives = 148/198 (74.75%), Query Frame = 3
Query:   51 EVAEQQGGGDEFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSH 644
            EV+E+    +    KDY DPPPAPL D  EL  WSFYRA+IAEFIA            IGYK Q+    + DQCGGVG LGIAWAFGGMIFILVYCTAGISGGHINPAVTFGL L RKVS+IRA++Y+VAQCLG I G G VK   K  YN  GGGAN +A GY+ GT LGAEIIGTFVLVYTVFSATDPKR+ARDSH
Sbjct:    4 EVSEEP---EHVRPKDYTDPPPAPLFDVGELRLWSFYRALIAEFIATLLFLYITVATVIGYKVQS----SADQCGGVGTLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVSVIRAVMYIVAQCLGGIVGVGIVKGIMKHQYNANGGGANMVASGYSTGTALGAEIIGTFVLVYTVFSATDPKRNARDSH 194          

HSP 2 Score: 32.7278 bits (73), Expect = 1.579e-72
Identity = 15/19 (78.95%), Postives = 15/19 (78.95%), Query Frame = 2
Query:  653 LGTTPIGVAVFMVHLATIP 709
            L   PIG AVFMVHLATIP
Sbjct:  198 LAPLPIGFAVFMVHLATIP 216          
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 8.441e-68
Identity = 130/210 (61.90%), Postives = 145/210 (69.05%), Query Frame = 3
Query:   15 KHPKREKMGKDVEVAEQQGGGDEFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSH 644
            K P+R+ +G   +  +          KDY +PPPAPL +  EL  WSFYRA IAEFIA            +G K    PN+    C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RA+ YM+ QCLGAICG G VK FQ + Y   GGGAN +A GY KG+GLGAEIIGTFVLVYTVFSATD KRSARDSH
Sbjct:   14 KFPERQPIGTSAQSTD----------KDYKEPPPAPLFEPGELSSWSFYRAGIAEFIATFLFLYITVLTVMGVKRA--PNM----CASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAGVVKGFQPTPYQTLGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSH 207          

HSP 2 Score: 31.5722 bits (70), Expect = 8.441e-68
Identity = 14/19 (73.68%), Postives = 15/19 (78.95%), Query Frame = 2
Query:  653 LGTTPIGVAVFMVHLATIP 709
            L   PIG AVF+VHLATIP
Sbjct:  211 LAPLPIGFAVFLVHLATIP 229          
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 7.059e-67
Identity = 129/210 (61.43%), Postives = 144/210 (68.57%), Query Frame = 3
Query:   15 KHPKREKMGKDVEVAEQQGGGDEFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSH 644
            K P+R+ +G   +           S KDY +PPPAPL +  EL  WSF+RA IAEFIA            +G K    PN+    C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RA+ Y+V QCLGAICG G VK FQ   Y   GGGAN +A GY KG+GLGAEIIGTFVLVYTVFSATD KR+ARDSH
Sbjct:   14 KFPERQPIGTSAQ-----------SDKDYKEPPPAPLFEPGELASWSFWRAGIAEFIATFLFLYITVLTVMGVKRS--PNM----CASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTIAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSH 206          

HSP 2 Score: 31.5722 bits (70), Expect = 7.059e-67
Identity = 14/19 (73.68%), Postives = 15/19 (78.95%), Query Frame = 2
Query:  653 LGTTPIGVAVFMVHLATIP 709
            L   PIG AVF+VHLATIP
Sbjct:  210 LAPLPIGFAVFLVHLATIP 228          
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3)

HSP 1 Score: 243.817 bits (621), Expect = 9.204e-67
Identity = 126/193 (65.28%), Postives = 138/193 (71.50%), Query Frame = 3
Query:   66 QGGGDEFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSH 644
            QG  D    KDY +PPPAPL +  EL  WSFYRA IAEF+A            +G       N +T +C  VGI GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RAL YMV QCLGAICG G VK FQK  Y   GGGAN +A GY KG GLGAEI+GTF+LVYTVFSATD KR+ARDSH
Sbjct:   26 QGSDD----KDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGV------NNSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQKGLYETTGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSH 208          

HSP 2 Score: 31.5722 bits (70), Expect = 9.204e-67
Identity = 14/19 (73.68%), Postives = 15/19 (78.95%), Query Frame = 2
Query:  653 LGTTPIGVAVFMVHLATIP 709
            L   PIG AVF+VHLATIP
Sbjct:  212 LAPLPIGFAVFLVHLATIP 230          
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2)

HSP 1 Score: 243.817 bits (621), Expect = 9.205e-67
Identity = 129/210 (61.43%), Postives = 143/210 (68.10%), Query Frame = 3
Query:   15 KHPKREKMGKDVEVAEQQGGGDEFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSH 644
            K P+R+ +G   +            +KDY +PPPAP  +  EL  WSFYRA IAEFIA            +G K    PN+    C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RAL Y+V QCLGAICG G VK FQ   Y   GGGAN +A GY KG+GLGAEI+GTFVLVYTVFSATD KRSARDSH
Sbjct:   14 KFPERQPIGTAAQT----------ESKDYKEPPPAPFFEPGELKSWSFYRAGIAEFIATFLFLYVTVLTVMGVKRA--PNM----CASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIVMQCLGAICGAGVVKGFQPGLYQTNGGGANVVAHGYTKGSGLGAEIVGTFVLVYTVFSATDAKRSARDSH 207          

HSP 2 Score: 31.5722 bits (70), Expect = 9.205e-67
Identity = 14/19 (73.68%), Postives = 15/19 (78.95%), Query Frame = 2
Query:  653 LGTTPIGVAVFMVHLATIP 709
            L   PIG AVF+VHLATIP
Sbjct:  211 LAPLPIGFAVFLVHLATIP 229          
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 9.205e-67
Identity = 129/210 (61.43%), Postives = 144/210 (68.57%), Query Frame = 3
Query:   15 KHPKREKMGKDVEVAEQQGGGDEFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSH 644
            K P+R+ +G   +           + KDY +PPPAP  +  EL  WSFYRA IAEFIA            +G K    PN+    C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RA+ Y+V QCLGAICG G VK FQ + Y   GGGAN +A GY KG+GLGAEIIGTFVLVYTVFSATD KRSARDSH
Sbjct:   14 KFPERQPIGTSAQ-----------TDKDYKEPPPAPFFEPGELSSWSFYRAGIAEFIATFLFLYITVLTVMGVKRA--PNM----CASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYIVMQCLGAICGAGVVKGFQPNPYQTLGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSH 206          

HSP 2 Score: 31.5722 bits (70), Expect = 9.205e-67
Identity = 14/19 (73.68%), Postives = 15/19 (78.95%), Query Frame = 2
Query:  653 LGTTPIGVAVFMVHLATIP 709
            L   PIG AVF+VHLATIP
Sbjct:  210 LAPLPIGFAVFLVHLATIP 228          
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 1.200e-66
Identity = 129/210 (61.43%), Postives = 143/210 (68.10%), Query Frame = 3
Query:   15 KHPKREKMGKDVEVAEQQGGGDEFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSH 644
            K P+R+ +G   +           S KDY +PPPAP  +  EL  WSF+RA IAEFIA            +G K    PN+    C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RAL Y+V QCLGAICG G VK FQ   Y   GGGAN +A GY KG+GLGAEIIGTFVLVYTVFSATD KR+ARDSH
Sbjct:   14 KFPERQPIGTSAQ-----------SDKDYKEPPPAPFFEPGELSSWSFWRAGIAEFIATFLFLYITVLTVMGVKRS--PNM----CASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSH 206          

HSP 2 Score: 31.5722 bits (70), Expect = 1.200e-66
Identity = 14/19 (73.68%), Postives = 15/19 (78.95%), Query Frame = 2
Query:  653 LGTTPIGVAVFMVHLATIP 709
            L   PIG AVF+VHLATIP
Sbjct:  210 LAPLPIGFAVFLVHLATIP 228          
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 1.200e-66
Identity = 129/210 (61.43%), Postives = 143/210 (68.10%), Query Frame = 3
Query:   15 KHPKREKMGKDVEVAEQQGGGDEFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSH 644
            K P+R+ +G   +           S KDY +PPPAP  +  EL  WSF+RA IAEFIA            +G K    PN+    C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RAL Y+V QCLGAICG G VK FQ   Y   GGGAN +A GY KG+GLGAEIIGTFVLVYTVFSATD KR+ARDSH
Sbjct:   14 KFPERQPIGTSAQ-----------SDKDYKEPPPAPFFEPGELSSWSFWRAGIAEFIATFLFLYITVLTVMGVKRS--PNM----CASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSH 206          

HSP 2 Score: 31.5722 bits (70), Expect = 1.200e-66
Identity = 14/19 (73.68%), Postives = 15/19 (78.95%), Query Frame = 2
Query:  653 LGTTPIGVAVFMVHLATIP 709
            L   PIG AVF+VHLATIP
Sbjct:  210 LAPLPIGFAVFLVHLATIP 228          
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: PIP15_MAIZE (Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 3.471e-66
Identity = 122/184 (66.30%), Postives = 134/184 (72.83%), Query Frame = 3
Query:   93 KDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSH 644
            KDY +PPPAPL + EEL  WSFYRA IAEF+A            +G         ++ +C  VGI GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RAL YMV QCLGAICG G VK FQ+  Y   GGGAN +  GY KG GLGAEI+GTFVLVYTVFSATD KRSARDSH
Sbjct:   31 KDYKEPPPAPLFEAEELTSWSFYRAGIAEFVATFLFLYISILTVMGVSK------SSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQEGLYMGAGGGANAVNPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRSARDSH 208          

HSP 2 Score: 31.5722 bits (70), Expect = 3.471e-66
Identity = 14/19 (73.68%), Postives = 15/19 (78.95%), Query Frame = 2
Query:  653 LGTTPIGVAVFMVHLATIP 709
            L   PIG AVF+VHLATIP
Sbjct:  212 LAPLPIGFAVFLVHLATIP 230          
The following BLAST results are available for this feature:
BLAST of FC869034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
PIP1_ATRCA4.580e-7568.18Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1[more]
PIP26_ORYSJ1.579e-7268.18Probable aquaporin PIP2-6 OS=Oryza sativa subsp. j... [more]
PIP14_ARATH8.441e-6861.90Probable aquaporin PIP1-4 OS=Arabidopsis thaliana ... [more]
PIP12_ARATH7.059e-6761.43Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2... [more]
PIP12_ORYSJ9.204e-6765.28Probable aquaporin PIP1-2 OS=Oryza sativa subsp. j... [more]
PIP15_ARATH9.205e-6761.43Probable aquaporin PIP1-5 OS=Arabidopsis thaliana ... [more]
PIP13_ARATH9.205e-6761.43Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3... [more]
PIP11_VICFA1.200e-6661.43Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1[more]
PIP11_ARATH1.200e-6661.43Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1... [more]
PIP15_MAIZE3.471e-6666.30Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC31007G10EF AbioticL1 Citrus clementina cDNA clone C31007G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869034 ID=FC869034; Name=FC869034; organism=Citrus clementina; type=EST; length=714bp
AGAGTTTAATTACAAAACATCCTAAAAGGGAAAAAATGGGGAAGGATGTT
GAAGTTGCTGAGCAGCAAGGCGGCGGCGACGAGTTCTCAGCCAAGGACTA
CCACGACCCCCCTCCGGCGCCGCTGATCGATTTCGAGGAGCTGGGCAAGT
GGTCTTTTTACAGAGCTGTAATTGCTGAGTTCATCGCTACGCTTTTGTTT
CTTTATGTTACCGTCTTGACTGTGATTGGATACAAGAGCCAGACTGATCC
CAACTTGAATACCGATCAGTGTGGTGGCGTTGGCATTCTTGGCATCGCTT
GGGCCTTTGGTGGCATGATCTTCATTCTCGTTTACTGCACAGCCGGTATT
TCTGGTGGACATATCAACCCGGCTGTGACATTCGGACTGTTCTTGGGGCG
CAAGGTGTCGCTCATCCGAGCTCTTTTGTACATGGTAGCACAGTGCTTGG
GTGCAATCTGTGGTTGTGGGTTTGTGAAGGCTTTCCAAAAATCATACTAC
AACAGGTATGGAGGTGGGGCCAATGAGCTAGCTGATGGATACAACAAGGG
CACCGGACTGGGTGCTGAGATCATCGGTACTTTCGTTCTTGTCTACACTG
TTTTCTCTGCCACTGATCCTAAGAGGAGCGCAAGAGACTCCCATGTTCCG
GTCTTGGCACCACTCCCATTGGGGTTGCTGTGTTCATGGTTCACTTGGCC
ACCATCCCATCACG
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