FC869034

Overview
NameFC869034
Unique NameFC869034
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: MIP_BOVIN (Lens fiber major intrinsic protein OS=Bos taurus GN=MIP PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.285e-14
Identity = 57/166 (34.34%), Postives = 79/166 (47.59%), Query Frame = 3
Query:  138 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSAR 635
            EL   SF+RA+ AEF A            +G   +  P       G + +L +A AFG  +  LV     ISG H+NPAVTF   +G ++SL+RA+ YMVAQ LGA+ G   + +       R     N L  G + G     EI  T   V  +F+  D +R+ R
Sbjct:    3 ELRSASFWRAICAEFFASLFYVFFG----LGASLRWAP-------GPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAV-RGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGR 156          
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: AQPZ_PSEPK (Aquaporin Z OS=Pseudomonas putida (strain KT2440) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.601e-14
Identity = 42/126 (33.33%), Postives = 66/126 (52.38%), Query Frame = 3
Query:  276 GVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFV-------KAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSA 632
            G+G+LG+A+AFG  +  + +    ISG H+NPAV+FGL +G +      L Y++AQ +GAI   G +         F+ S      G A+    GY  G G  +E++ T + +  +  ATD +  A
Sbjct:   34 GIGVLGVAFAFGLTVLTMAFAIGHISGCHLNPAVSFGLVVGGRFPAKELLPYVIAQVIGAILAAGVIYLIASGKAGFELSAGLASNGYADHSPGGYTLGAGFVSEVVMTAMFLVVIMGATDARAPA 159          

HSP 2 Score: 22.3274 bits (46), Expect = 1.601e-14
Identity = 8/21 (38.10%), Postives = 14/21 (66.67%), Query Frame = 2
Query:  647 SGLGTTPIGVAVFMVHLATIP 709
            +G     IG+A+ ++HL +IP
Sbjct:  159 AGFAPIAIGLALTLIHLISIP 179          
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.679e-14
Identity = 54/161 (33.54%), Postives = 79/161 (49.07%), Query Frame = 3
Query:  153 SFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSA 632
            S  +A ++EFIA            + +   T            G++ IA A    +F+ V   A ISGGH+NPAVT GL +G  ++LI    Y +AQCLG+I  C  +  F     N      + ++ G     G+  EI+ TF LVYTV+ +A DPK+ +
Sbjct:   16 SSLKAYLSEFIATLLFVFAGVGSAVAFAKLTSDGA----LDPAGLVAIAIAHAFALFVGVSIAANISGGHLNPAVTLGLAIGGNITLITGFFYWIAQCLGSIVAC-LLLVF---VTNGKSVPTHGVSAGLGAVEGVVMEIVVTFALVYTVYATAADPKKGS 168          
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: TIP22_MAIZE (Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.192e-14
Identity = 58/161 (36.02%), Postives = 79/161 (49.07%), Query Frame = 3
Query:  162 RAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGC---GFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSA 632
            +A +AEFIA            I +   T    N       G++ IA A    +F+ V   A  SGGH+NPAVTFGL +G  ++++  L Y VAQ LGA   C    FV   +    +   GG  EL        G+  EI+ TF LVYTV+ +A DPK+ +
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAFGQLT----NGGALDPAGLVAIAVAHALALFVGVSVAANTSGGHLNPAVTFGLAVGGHITVLTGLFYWVAQLLGASVACLLLRFVTHGKAIPTHGVSGGTTEL-------EGVVFEIVITFALVYTVYATAADPKKGS 168          
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: MIP_CANFA (Lens fiber major intrinsic protein OS=Canis familiaris GN=MIP PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.192e-14
Identity = 56/166 (33.73%), Postives = 77/166 (46.39%), Query Frame = 3
Query:  138 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSAR 635
            EL   SF+RA+ AEF A            +G   +  P       G + +L +A AFG  +  LV     ISG H+NPAVTF   +G ++SL+RA  YM AQ LGA+ G   + +       R     N L  G + G     EI  T   V  +F+  D +R+ R
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWTP-------GPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAV-RGNLALNTLHPGVSVGQATTVEIFLTLQFVLCIFATYDERRNGR 156          
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: MIP_SHEEP (Lens fiber major intrinsic protein OS=Ovis aries GN=MIP PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.863e-14
Identity = 56/166 (33.73%), Postives = 79/166 (47.59%), Query Frame = 3
Query:  138 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSAR 635
            EL   SF+RA+ AEF A            +G   +  P       G + +L +A AFG  +  LV     ISG H+NPAVTF   +G ++SL+RA+ Y+VAQ LGA+ G   + +       R     N L  G + G     EI  T   V  +F+  D +R+ R
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWAP-------GPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAV-RGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGR 156          
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 4.884e-14
Identity = 54/159 (33.96%), Postives = 82/159 (51.57%), Query Frame = 3
Query:  162 RAVIAEFIAXXXXXXXXXXXXIGY-KSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSA 632
            +A ++EFIA            + + K  +D  L+       G++ +A A    +F+ V   A ISGGH+NPAVT GL +G  +++I    Y +AQCLG+I  C  +  F     N      + +A G     G+  EI+ TF LVYTV+ +A DPK+ +
Sbjct:   19 KAYLSEFIATLLFVFAGVGSALAFAKLTSDAALDP-----AGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITVITGFFYWIAQCLGSIVAC-LLLVF---VTNGESVPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGS 168          
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: MIP_RANPI (Lens fiber major intrinsic protein OS=Rana pipiens PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.331e-14
Identity = 52/166 (31.33%), Postives = 75/166 (45.18%), Query Frame = 3
Query:  138 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSAR 635
            E   +SF+RAV AEF              + + +           G   +L IA AFG ++  +V     +SG HINPAVTF   +G ++SL RA+ Y+ AQ LGA+ G   +     +   R     N L  G + G     EI  T   V  +F+  D +R+ R
Sbjct:    3 EFRSFSFWRAVFAEFFGTMFYVFFGLGASLKWAA-----------GPANVLVIALAFGLVLATMVQSIGHVSGAHINPAVTFAFLIGSQMSLFRAIFYIAAQLLGAVAGAAVLYGVTPAAI-RGNLALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGR 156          
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: AQP_ANOGA (Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP008842 PE=3 SV=4)

HSP 1 Score: 77.0258 bits (188), Expect = 1.088e-13
Identity = 44/113 (38.94%), Postives = 64/113 (56.64%), Query Frame = 3
Query:  294 IAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRS 629
            IA+ FG ++  L      +SG HINPAVT GL +   VS+++   Y+V+QC+GAI G   +KA   S     GG G   +A G + G G+  E + TF+LV+ V    D +R+
Sbjct:   57 IAFTFGLVVATLAQAFGHVSGCHINPAVTIGLIVTADVSILKGAFYIVSQCIGAIAGAAVIKAATPS--EVVGGLGVTGIAPGLSTGQGVLIEALITFMLVFVVHGVCDNRRT 167          
BLAST of FC869034 vs. ExPASy Swiss-Prot
Match: MIP_RAT (Lens fiber major intrinsic protein (Fragment) OS=Rattus norvegicus GN=Mip PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.421e-13
Identity = 55/166 (33.13%), Postives = 77/166 (46.39%), Query Frame = 3
Query:  138 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSAR 635
            EL   SF+RA+ AEF A            +G   +  P       G + +L +A AFG  +  LV     ISG H+NPAVTF   +G ++SL+RA  Y+ AQ LGA+ G   + +       R     N L  G + G     EI  T   V  +F+  D +R+ R
Sbjct:    1 ELRSASFWRAIFAEFFATLFYVFFG----LGSSLRWAP-------GPLHVLQVALAFGLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPAV-RGNLALNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGR 154          
The following BLAST results are available for this feature:
BLAST of FC869034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
MIP_BOVIN1.285e-1434.34Lens fiber major intrinsic protein OS=Bos taurus G... [more]
AQPZ_PSEPK1.601e-1433.33Aquaporin Z OS=Pseudomonas putida (strain KT2440) ... [more]
TIP23_ARATH1.679e-1433.54Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3... [more]
TIP22_MAIZE2.192e-1436.02Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1[more]
MIP_CANFA2.192e-1433.73Lens fiber major intrinsic protein OS=Canis famili... [more]
MIP_SHEEP2.863e-1433.73Lens fiber major intrinsic protein OS=Ovis aries G... [more]
TIP22_ARATH4.884e-1433.96Probable aquaporin TIP2-2 OS=Arabidopsis thaliana ... [more]
MIP_RANPI8.331e-1431.33Lens fiber major intrinsic protein OS=Rana pipiens... [more]
AQP_ANOGA1.088e-1338.94Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP0088... [more]
MIP_RAT1.421e-1333.13Lens fiber major intrinsic protein (Fragment) OS=R... [more]

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Properties
Property NameValue
Genbank descriptionC31007G10EF AbioticL1 Citrus clementina cDNA clone C31007G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869034 ID=FC869034; Name=FC869034; organism=Citrus clementina; type=EST; length=714bp
AGAGTTTAATTACAAAACATCCTAAAAGGGAAAAAATGGGGAAGGATGTT
GAAGTTGCTGAGCAGCAAGGCGGCGGCGACGAGTTCTCAGCCAAGGACTA
CCACGACCCCCCTCCGGCGCCGCTGATCGATTTCGAGGAGCTGGGCAAGT
GGTCTTTTTACAGAGCTGTAATTGCTGAGTTCATCGCTACGCTTTTGTTT
CTTTATGTTACCGTCTTGACTGTGATTGGATACAAGAGCCAGACTGATCC
CAACTTGAATACCGATCAGTGTGGTGGCGTTGGCATTCTTGGCATCGCTT
GGGCCTTTGGTGGCATGATCTTCATTCTCGTTTACTGCACAGCCGGTATT
TCTGGTGGACATATCAACCCGGCTGTGACATTCGGACTGTTCTTGGGGCG
CAAGGTGTCGCTCATCCGAGCTCTTTTGTACATGGTAGCACAGTGCTTGG
GTGCAATCTGTGGTTGTGGGTTTGTGAAGGCTTTCCAAAAATCATACTAC
AACAGGTATGGAGGTGGGGCCAATGAGCTAGCTGATGGATACAACAAGGG
CACCGGACTGGGTGCTGAGATCATCGGTACTTTCGTTCTTGTCTACACTG
TTTTCTCTGCCACTGATCCTAAGAGGAGCGCAAGAGACTCCCATGTTCCG
GTCTTGGCACCACTCCCATTGGGGTTGCTGTGTTCATGGTTCACTTGGCC
ACCATCCCATCACG
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