FC869035

Overview
NameFC869035
Unique NameFC869035
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length679
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC869035 vs. ExPASy Swiss-Prot
Match: MCFR_DICDI (Mitochondrial substrate carrier family protein R OS=Dictyostelium discoideum GN=mcfR PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.216e-11
Identity = 36/101 (35.64%), Postives = 57/101 (56.44%), Query Frame = 3 
Query:  285 SSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDR 587
            +S +V  L GGVS  ++K+  AP+ERVK+L Q + +M       + +  +       +K+EG+  LW+GNTA ++R FP  A+ +   DY K   NF  D+
Sbjct:    9 TSPMVTLLAGGVSGVIAKSTIAPLERVKILYQVKSKM-------YSFNSVYGLMKNIIKNEGLAGLWKGNTATILRIFPYSAIQWTSYDYLKN--NFVTDK 100
The following BLAST results are available for this feature:
BLAST of FC869035 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
MCFR_DICDI1.216e-1135.64Mitochondrial substrate carrier family protein R O... [more]

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Properties
Property NameValue
Genbank descriptionC31007G11EF AbioticL1 Citrus clementina cDNA clone C31007G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869035 ID=FC869035; Name=FC869035; organism=Citrus clementina; type=EST; length=679bp
GACATTACGGAGGTCTCACACTCGGCGACCTTCTCAGGTCACCATCTTCA
GCTGCAAACATGGCAGATGGATCGTATCCATCCGTATTTCAGAAAATGCA
AGGCCAGTCATACTTCATTTCTGGGGTCTCCCCCAATTTGTATGCCCACA
ACTACAGTGTGGCAGGTTCCTTTGTTAATAGAGGATCACAGAATTCTTTT
TGGGCAGCAAGTCAGGGAACTGGCCTGGCACTTGTGTCTCCTGTTTCTCC
TATATTCGTACAAGCTCCATCAGAAAAAAGTCTTTCTTCTTTTTTGGTGG
ATTTTCTCATGGGAGGAGTTTCAGCAGCTGTTTCCAAGACTGCAGCTGCT
CCTATTGAGCGGGTTAAGCTTTTGATTCAGAATCAAGATGAGATGATCAA
GAGTGGTCGGCTCTCGCATCCGTACAAGGGGATTTCTGATTGCTTTGGTA
GAACTGTTAAGGATGAAGGCATACTATCTCTTTGGAGAGGCAACACTGCC
AATGTTATCAGATACTTCCCTACCCAGGCCCTGAACTTTGCATTCAAGGA
TTACTTTAAGAGGCTGTTTAACTTCAAGAAAGACAGAGATGGCTACTGGA
AGTGGTTTGCTGGGAACTTGGCATCTGGTGGGGCTGCTGGTGCTTCATCG
CTTCTTTTTGTGTATTCGCTTGACTATGC
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