FC869038
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869038 vs. ExPASy Swiss-Prot
Match: DHRSX_HUMAN (Dehydrogenase/reductase SDR family member on chromosome X OS=Homo sapiens GN=DHRSX PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 7.203e-16 Identity = 46/124 (37.10%), Postives = 71/124 (57.26%), Query Frame = 3 Query: 342 AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXXXXXXXXXXXXDTMKKT 713 AIVTG + GIG TA+ LA G+HVI+A N + K V I +E + KV+ + D++S+ S+R+F ++ + PL++LINNAG+M P ++D E F N DT+K++ Sbjct: 46 AIVTGGTDGIGYSTAKHLARLGMHVIIAGNNDSKAKQVVSKIKEETLNDKVEFLYCDLASMTSIRQFVQKFKMKKIPLHVLINNAGVMMVPQRKTRDGFEEHFGLNYLGHFLLTNLLLDTLKES 169
BLAST of FC869038 vs. ExPASy Swiss-Prot
Match: RDH13_MOUSE (Retinol dehydrogenase 13 OS=Mus musculus GN=Rdh13 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.605e-15 Identity = 51/132 (38.64%), Postives = 75/132 (56.82%), Query Frame = 3 Query: 333 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM----AAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXXXXXXXXXXXXDTMKKTA 716 G T IVTGA++GIG +TA LA RG +VI+A R+M A KD+R E + +V A LD++SL S+R+FA + + ++IL+NNA +M P ++D E+QF N D +K +A Sbjct: 38 GKTVIVTGANTGIGKQTALELAKRGGNVILACRDMEKCEVAAKDIR----GETLNPRVRAERLDLASLKSIREFARKVIKEEERVDILVNNAAVMRCPHWTTEDGFEMQFGVNYLGHFLLTNLLLDKLKASA 165
BLAST of FC869038 vs. ExPASy Swiss-Prot
Match: RDH12_BOVIN (Retinol dehydrogenase 12 OS=Bos taurus GN=RDH12 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.096e-15 Identity = 42/109 (38.53%), Postives = 65/109 (59.63%), Query Frame = 3 Query: 333 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATN 659 G ++TGA++GIG ETAR LA RG V +A R++ G+ I + +++V +LD+S S+R FA + ++ + L+ILINNAG+M P+ + D E A N Sbjct: 39 GKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIQADTKNSQVLVRKLDLSDTKSIRAFAEGFLAEEKQLHILINNAGVMLCPYSKTADGFETHLAVN 147
BLAST of FC869038 vs. ExPASy Swiss-Prot
Match: RDH11_MOUSE (Retinol dehydrogenase 11 OS=Mus musculus GN=Rdh11 PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 6.098e-15 Identity = 44/135 (32.59%), Postives = 74/135 (54.81%), Query Frame = 3 Query: 312 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXXXXXXXXXXXXDTMKKTA 716 T + G AIVTGA++GIG ETA+ LA RG V +A R++ G+ I +++V +LD++ S+R FA ++ ++ + L++LINNAG+M P+ + D E+ N + +K++A Sbjct: 31 TSNVQLPGKVAIVTGANTGIGKETAKDLAQRGARVYLACRDVDKGELAAREIQAVTGNSQVFVRKLDLADTKSIRAFAKDFLAEEKHLHLLINNAGVMMCPYSKTADGFEMHIGVNHLGHFLLTHLLLEKLKESA 165
BLAST of FC869038 vs. ExPASy Swiss-Prot
Match: RDH12_HUMAN (Retinol dehydrogenase 12 OS=Homo sapiens GN=RDH12 PE=1 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 1.040e-14 Identity = 41/109 (37.61%), Postives = 64/109 (58.72%), Query Frame = 3 Query: 333 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATN 659 G ++TGA++GIG ETAR LA RG V +A R++ G+ I + +++V +LD+S S+R FA + ++ + L+ILINNAG+M P+ + D E N Sbjct: 39 GKVVVITGANTGIGKETARELASRGARVYIACRDVLKGESAASEIRVDTKNSQVLVRKLDLSDTKSIRAFAEGFLAEEKQLHILINNAGVMMCPYSKTADGFETHLGVN 147
BLAST of FC869038 vs. ExPASy Swiss-Prot
Match: RDH11_HUMAN (Retinol dehydrogenase 11 OS=Homo sapiens GN=RDH11 PE=1 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 1.040e-14 Identity = 44/135 (32.59%), Postives = 73/135 (54.07%), Query Frame = 3 Query: 312 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXXXXXXXXXXXXDTMKKTA 716 T + G +VTGA++GIG ETA+ LA RG V +A R++ G+ V + I + +V +LD+S S+R FA + ++ + L++LINNAG+M P+ + D E+ N + +K++A Sbjct: 34 TSTVQLPGKVVVVTGANTGIGKETAKELAQRGARVYLACRDVEKGELVAKEIQTTTGNQQVLVRKLDLSDTKSIRAFAKGFLAEEKHLHVLINNAGVMMCPYSKTADGFEMHIGVNHLGHFLLTHLLLEKLKESA 168
BLAST of FC869038 vs. ExPASy Swiss-Prot
Match: RDH14_HUMAN (Retinol dehydrogenase 14 OS=Homo sapiens GN=RDH14 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.346e-13 Identity = 44/122 (36.07%), Postives = 65/122 (53.28%), Query Frame = 3 Query: 333 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA-------------KVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATN 659 G T ++TGA+SG+G TA L G VIM R+ A ++ + +E+ A ++ ELD++SL SVR F E + L++LINNAGI P+M ++D E+QF N Sbjct: 43 GKTVLITGANSGLGRATAAELLRLGARVIMGCRDRARAEEAAGQLRRELRQAAECGPEPGVSGVGELIVRELDLASLRSVRAFCQEMLQEEPRLDVLINNAGIFQCPYMKTEDGFEMQFGVN 164
BLAST of FC869038 vs. ExPASy Swiss-Prot
Match: RDH14_MOUSE (Retinol dehydrogenase 14 OS=Mus musculus GN=Rdh14 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.707e-13 Identity = 49/149 (32.89%), Postives = 75/149 (50.34%), Query Frame = 3 Query: 249 MWLFSRKGPSGFSASSTAEEVTQGIDGT--GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA----------KVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATN 659 +WL +R+ FS + G G G T ++TGA+SG+G TA L G VIM R+ A ++ + +E+ A ++ ELD++SL SVR F E + L++LINNAG+ P+ ++D E+QF N Sbjct: 18 LWLAARR----FSGPRNQRQQGGGDPGLMHGKTVLITGANSGLGRATAAELLRLGARVIMGCRDRARAEEAAGQLRQELCQAGGAGPDGTDGQLVVKELDLASLRSVRAFCQELLQEEPRLDVLINNAGVFHCPYTKTEDGFEMQFGVN 162
BLAST of FC869038 vs. ExPASy Swiss-Prot
Match: OXIR_STRAT (Probable oxidoreductase OS=Streptomyces antibioticus PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.271e-12 Identity = 46/114 (40.35%), Postives = 65/114 (57.02%), Query Frame = 3 Query: 321 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPF-MLSKDNIELQFATN 659 +D TG A+VTG +SG+G ET R LA G V +A R + + + + + + +V A LD+S ASV FA + PL+IL+ NAGIMA P L+ + E+Q ATN Sbjct: 1 MDLTGRRAVVTGGASGLGAETVRALAAAGAEVTVATRRPLSAEPLVQELAAAGGAGRVTAEALDLSDPASVESFARAWRG---PLDILVANAGIMALPTRTLAPNGWEMQLATN 111
BLAST of FC869038 vs. ExPASy Swiss-Prot
Match: DHR13_HUMAN (Dehydrogenase/reductase SDR family member 13 OS=Homo sapiens GN=DHRS13 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.833e-12 Identity = 43/90 (47.78%), Postives = 59/90 (65.56%), Query Frame = 3 Query: 333 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGI 602 G TA+VTGA+SGIG TA LA RG V++A R+ G+ + +E + +V M LD++SLASVR FA+ + S L+ILI+NAGI Sbjct: 36 GRTAVVTGANSGIGKMTALELARRGARVVLACRSQERGEAAAFDLRQESGNNEVIFMALDLASLASVRAFATAFLSSEPRLDILIHNAGI 125 The following BLAST results are available for this feature:
BLAST of FC869038 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869038 ID=FC869038; Name=FC869038; organism=Citrus clementina; type=EST; length=736bpback to top |