FC869038
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869038 vs. ExPASy Swiss-Prot
Match: DHR13_BOVIN (Dehydrogenase/reductase SDR family member 13 OS=Bos taurus GN=DHRS13 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.699e-12 Identity = 43/90 (47.78%), Postives = 59/90 (65.56%), Query Frame = 3 Query: 333 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGI 602 G TA+VTGA+SGIG TA LA RG V++A R+ G+ + +E + +V M LD++SLASVR FA+ + S L+ILI+NAGI Sbjct: 36 GRTAVVTGANSGIGKMTALELARRGARVVLACRSRERGEAAAFDLRQESGNNEVIFMALDLASLASVRAFATAFLSSEPRLDILIHNAGI 125
BLAST of FC869038 vs. ExPASy Swiss-Prot
Match: OXIR_STRLI (Probable oxidoreductase OS=Streptomyces lividans PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.832e-12 Identity = 50/117 (42.74%), Postives = 68/117 (58.12%), Query Frame = 3 Query: 321 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA---KVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPF-MLSKDNIELQFATN 659 +D TG A+VTG +SG+G ET R LA G V +A R+ + E +V+E +A +V A LD+S +ASV FA + PL+IL+ NAGIMA P L+ E+Q ATN Sbjct: 1 MDLTGRRAVVTGGASGLGAETVRALAAAGAEVTIATRHPQSA----EPLVQEAAAAGAGRVHAEALDLSDVASVDSFARAWRG---PLDILVANAGIMALPTRTLTPYGWEMQLATN 110
BLAST of FC869038 vs. ExPASy Swiss-Prot
Match: POR_CHLRE (Protochlorophyllide reductase, chloroplastic OS=Chlamydomonas reinhardtii GN=PORA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.241e-12 Identity = 45/135 (33.33%), Postives = 65/135 (48.15%), Query Frame = 3 Query: 339 TAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGI---MASPFMLSKDNIELQFATNXXXXXXXXXXXXDTMKKTAQKSSR 731 TAI+TGASSG+G A+ LA G HV+MA R+ + + + +P+ + LD+SSL SVR+F + + GR L+ L+ NA + A + D EL TN D +K K R Sbjct: 87 TAIITGASSGLGLNAAKALAATGEWHVVMACRDFLKAEQAAKKV--GMPAGSYSILHLDLSSLESVRQFVQNFKASGRRLDALVCNAAVYLPTAKEPRFTADGFELSVGTNHLGHFLLTNLLLDDLKNAPNKQPR 219
BLAST of FC869038 vs. ExPASy Swiss-Prot
Match: POR_SYNY3 (Light-dependent protochlorophyllide reductase OS=Synechocystis sp. (strain PCC 6803) GN=por PE=3 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.406e-11 Identity = 42/110 (38.18%), Postives = 62/110 (56.36%), Query Frame = 3 Query: 339 TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGI---MASPFMLSKDNIELQFATN 659 T I+TGASSG+G A+ L +G HVIMA RN+ + V + + P ++LD+ L SVR+F +++ GRPL L+ NA + + + S D+ EL ATN Sbjct: 8 TVIITGASSGVGLYGAKALIDKGWHVIMACRNLDKTQKVADEL--GFPKDSYTIIKLDLGYLDSVRRFVAQFRELGRPLKALVCNAAVYFPLLDEPLWSADDYELSVATN 115
BLAST of FC869038 vs. ExPASy Swiss-Prot
Match: POR_PLEBO (Light-dependent protochlorophyllide reductase OS=Plectonema boryanum GN=por PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.836e-11 Identity = 40/110 (36.36%), Postives = 61/110 (55.45%), Query Frame = 3 Query: 339 TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGI---MASPFMLSKDNIELQFATN 659 T ++TGASSG+G A+ L RG HV+MA RN+ +++ S + M +D+ SL SVRKF +++ G+ L+ L+ NA + + M S + EL ATN Sbjct: 8 TVVITGASSGVGLYAAKALVKRGWHVVMACRNLEKADSAAKSLGMSPDSYTL--MHIDLGSLDSVRKFVTQFRESGKSLDALVCNAAVHMPLLKEPMRSPEGYELSVATN 115
BLAST of FC869038 vs. ExPASy Swiss-Prot
Match: PORB_ARATH (Protochlorophyllide reductase B, chloroplastic OS=Arabidopsis thaliana GN=PORB PE=1 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 1.836e-11 Identity = 50/157 (31.85%), Postives = 78/157 (49.68%), Query Frame = 3 Query: 285 SASSTAEEVTQGIDGTGL----TAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGI---MASPFMLSKDNIELQFATNXXXXXXXXXXXXDTMKKTAQKSSR 731 +A++++ VT+ +DG +VTGASSG+G TA+ LA G +VIMA R+ + +++ +P M LD++SL SVR+F + PL++L+ NA + A S + EL ATN D +KK+ S R Sbjct: 68 TAATSSPTVTKSVDGKKTLRKGNVVVTGASSGLGLATAKALAETGKWNVIMACRDFLKAERAAKSV--GMPKDSYTVMHLDLASLDSVRQFVDNFRRTETPLDVLVCNAAVYFPTAKEPTYSAEGFELSVATNHLGHFLLARLLLDDLKKSDYPSKR 222
BLAST of FC869038 vs. ExPASy Swiss-Prot
Match: DHR13_MOUSE (Dehydrogenase/reductase SDR family member 13 OS=Mus musculus GN=Dhrs13 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.090e-11 Identity = 40/90 (44.44%), Postives = 58/90 (64.44%), Query Frame = 3 Query: 333 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGI 602 G T +VTGA+SGIG TA LA RG V++A R+ G+ + +E + +V M LD++SLASV+ FA+ + S L++LI+NAGI Sbjct: 36 GRTVVVTGANSGIGKMTALELARRGARVVLACRSRERGEAAAFDLRQESGNNEVIFMALDLASLASVQAFATAFLSSEPRLDVLIHNAGI 125
BLAST of FC869038 vs. ExPASy Swiss-Prot
Match: PORA_CUCSA (Protochlorophyllide reductase, chloroplastic OS=Cucumis sativus GN=PORA PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11 Identity = 46/135 (34.07%), Postives = 66/135 (48.89%), Query Frame = 3 Query: 339 TAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGI---MASPFMLSKDNIELQFATNXXXXXXXXXXXXDTMKKTAQKSSR 731 + ++TGASSG+G TA+ LA G HVIMA R+ K R A I M LD++SL SVR+F + GRPL++L+ NA + A + + EL TN + + K++ S R Sbjct: 88 SVVITGASSGLGLATAKALAETGKWHVIMACRDFL--KAERAAKSAGITKENYTVMHLDLASLDSVRQFVDNFRQSGRPLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHFLLSRLLLEDLNKSSYPSKR 220
BLAST of FC869038 vs. ExPASy Swiss-Prot
Match: POR_DAUCA (Protochlorophyllide reductase, chloroplastic OS=Daucus carota GN=POR1 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11 Identity = 48/135 (35.56%), Postives = 65/135 (48.15%), Query Frame = 3 Query: 339 TAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGI---MASPFMLSKDNIELQFATNXXXXXXXXXXXXDTMKKTAQKSSR 731 + I+TGASSG+G TA+ LA G HVIMA R+ K R A +P M LD++SL SVR+F + RPL++L+ NA + A + D EL TN D + K+ S R Sbjct: 87 SVIITGASSGLGLATAKALAETGKWHVIMACRDFL--KAERAAKSAGMPKENYTIMHLDLASLDSVRQFVETFRRSERPLDVLVCNAAVYFPTAKEPTYTADGFELSVGTNHLGHFLLSRLLLDDLNKSDYPSKR 219 The following BLAST results are available for this feature:
BLAST of FC869038 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC869038 ID=FC869038; Name=FC869038; organism=Citrus clementina; type=EST; length=736bpback to top |