FC869053

Overview
NameFC869053
Unique NameFC869053
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length634
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869053 vs. ExPASy Swiss-Prot
Match: PKS45_DICDI (Probable polyketide synthase 45 OS=Dictyostelium discoideum GN=pks45 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.506e-13
Identity = 49/164 (29.88%), Postives = 83/164 (50.61%), Query Frame = 1
Query:  172 EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKG------ASPHLGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHL--SPGESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAG 633
            E +   +K++E+ ++V AT +N  D+L  +   PP         + P  G+ECSG +  +G  V+++KVGD V  +      +  +      VL  P  +S  +AA+ P V CT + ++F + +L     ES L+H  S GIG   + + K  G   +++VT G
Sbjct: 1910 EAKQSNLKENEIEVQVVATGINFKDSLIFRNLVPPVLANHDGDYSKPEFGIECSGIVSRIGSKVTKFKVGDSVLGISWKSTSSHAINYQDAFVLK-PDNISFVEAASIPLVYCTSFYSLFYSGNLKIENNESVLIHQASGGIGLACLNILKSCGFKSKLYVTVG 2072          
BLAST of FC869053 vs. ExPASy Swiss-Prot
Match: QOR_SCHPO (Probable quinone oxidoreductase OS=Schizosaccharomyces pombe GN=zta1 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 9.764e-13
Identity = 52/169 (30.77%), Postives = 80/169 (47.34%), Query Frame = 1
Query:  127 IVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPHLGLECSGTILSVGKNVSR-WKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA 630
            + +++ G   VLQ+   E P+   + ++IK     LN  DT  R G Y  P    P  G E +G + +VG  V   +KVGD+V  L   G YA+   VP   V  V   + LK A+A      T ++ +     +  G++ +VH  + G+G    QM + + V V  TA
Sbjct:    6 VQVSKTGPSSVLQVITKEIPKPAPNGLVIKNAYAGLNYIDTYLRTGLYTAPLPYIP--GKEAAGVVAAVGDKVEADFKVGDRVVYLTPFGAYAQYTNVPTTLVSKVSEKIPLKIASAALLQGLTAYTLIEEAYPVKTGDTVVVHAAAGGVGLLLCQMLRARNVHVIATA 172          
BLAST of FC869053 vs. ExPASy Swiss-Prot
Match: PKS18_DICDI (Probable polyketide synthase 18 OS=Dictyostelium discoideum GN=pks18 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 9.764e-13
Identity = 52/163 (31.90%), Postives = 84/163 (51.53%), Query Frame = 1
Query:  190 IKDDEVLIKVEATALN-----------RADTLQRKGSYPPPKGASPHLGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHL--SPGESFLVHGGSSGIGTFAIQMGKCQGVR--VFVTAG 633
            IKDDE+ ++V+AT +N            A+++ R G        +P  G+E SG I  +G N++ +++GDQV   +G    +  V V        P+ +S ++AA+ P V  T   ++F    L  S  ES L+H G+ G+G  A+ + K +G +  VFVT G
Sbjct: 1858 IKDDEIEVEVKATGINYKDYLIYCGLVSAESINRYGDVN-----NPEFGIEYSGIISRIGNNITNFEIGDQVYG-MGLDTISTHVIVNPNYCYHKPTNISFQEAASIPCVYLTSLCSIFNIGCLSVSGNESILIHSGTGGVGLSALNILKWKGHKSHVFVTVG 2014          
BLAST of FC869053 vs. ExPASy Swiss-Prot
Match: YGD6_SCHPO (Zinc-type alcohol dehydrogenase-like protein C1773.06c OS=Schizosaccharomyces pombe GN=SPBC1773.06c PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.666e-12
Identity = 55/181 (30.39%), Postives = 87/181 (48.07%), Query Frame = 1
Query:  160 LQLQEVEDPQ-IKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPHLGLECSGTILSVGKNVSRWKVGDQVC------------------ALLGG---GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS--HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA 630
            L+ +E E PQ +   EVL+K++A +LN  D +  KG YP P       G + +G I  VG++V  ++ GD V                   + LGG   G + +   +PA  ++  P  +S ++ A  P  A T W+ +F +    + PG + LV  G+ G+ TFA+Q     G  V VT+
Sbjct:   17 LKPEEYEVPQKLNPGEVLVKLKAASLNYRDLIITKGLYPLPLQLPVVPGSDGAGIIEKVGEDVEGFEKGDSVVCNFFTNYLDGTPTDFATHSALGGTRDGCFQKYAVLPAHALVHAPKNLSFEEIATLPCAAVTAWNGLFGSKEHQVKPGNNVLVL-GTGGVSTFALQFALAAGANVTVTS 196          
BLAST of FC869053 vs. ExPASy Swiss-Prot
Match: ERYA2_SACER (Erythronolide synthase, modules 3 and 4 OS=Saccharopolyspora erythraea GN=eryA PE=1 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 2.175e-12
Identity = 51/155 (32.90%), Postives = 75/155 (48.39%), Query Frame = 1
Query:  172 EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPHLGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLP-VPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG 633
            +VE P ++  EV + V AT +N  D L   G YP        +G E +G + +VG +V  +  GD+V  L  G      +AV   ++L  VP G S  DAAA P    T    +   + L  G+S L+H  + G+G  A+ + +  G  V  TAG
Sbjct: 2843 DVEQP-LRAGEVRVDVRATGVNFRDVLLALGMYPQ----KADMGTEAAGVVTAVGPDVDAFAPGDRVLGLFQGA--FAPIAVTDHRLLARVPDGWSDADAAAVPIAYTTAHYALHDLAGLRAGQSVLIHAAAGGVGMAAVALARRAGAEVLATAG 2990          
BLAST of FC869053 vs. ExPASy Swiss-Prot
Match: MECR_DROME (Probable trans-2-enoyl-CoA reductase, mitochondrial OS=Drosophila melanogaster GN=CG16935 PE=3 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 2.841e-12
Identity = 51/166 (30.72%), Postives = 78/166 (46.99%), Query Frame = 1
Query:  121 KAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPHLGLECSGTILSVGKNVSRWKVGDQVCALLGG-GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV 612
            K++  TQ G P EVLQL E + P  KD++VL+K+ A  +N AD    +G YP         G EC   ++ VG  V  ++ G  V  L  G G +         Q+L V   V L +AA       T +  +     L PG++ + +G +S +G    Q+ +  G+
Sbjct:   24 KSLKYTQHGEPQEVLQLVEDKLPDPKDNQVLVKILAAPINPADINTIQGKYPVKPKFPAVGGNECVAEVICVGDKVKGFEAGQHVIPLASGLGTWTTHAVYKEDQLLIVSKKVGLAEAATSTVNPTTAYRMLKDFVQLCPGDTVIQNGANSAVGQAVHQLCRAWGI 189          
BLAST of FC869053 vs. ExPASy Swiss-Prot
Match: QORH_ARATH (Putative quinone-oxidoreductase homolog, chloroplastic OS=Arabidopsis thaliana GN=At4g13010 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.846e-12
Identity = 53/173 (30.64%), Postives = 77/173 (44.51%), Query Frame = 1
Query:  145 GSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP--PKGASPHLGLECSGTILSVGKNVSRWKVGDQVCAL---LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHL-----SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG 633
            G    L+  +V  P  K +EV +K+EAT+LN  D   +KG   P  P+        + +G ++ VG  V  +K GD+V A+   LGGGG AE         +  P  V   +AAA P    T    +   + L         + LV   S G+G +A+Q+ K     V  T G
Sbjct:   16 GGAAGLEHVQVPVPTPKSNEVCLKLEATSLNPVDWKIQKGMIRPFLPRKFPCIPATDVAGEVVEVGSGVKNFKAGDKVVAVLSHLGGGGLAEFAVATEKLTVKRPQEVGAAEAAALPVAGLTALQALTNPAGLKLDGTGKKANILVTAASGGVGHYAVQLAKLANAHVTATCG 188          
BLAST of FC869053 vs. ExPASy Swiss-Prot
Match: RT4I1_MOUSE (Reticulon-4-interacting protein 1, mitochondrial OS=Mus musculus GN=Rtn4ip1 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 6.329e-12
Identity = 67/201 (33.33%), Postives = 94/201 (46.77%), Query Frame = 1
Query:   85 SFTSTLESVGTMKAIVITQPGSPEVLQL-QEVEDPQIK-DDEVLIKVEATALNRADTLQRKGS------------YPPPKGAS--PHLGLECSGTILSVGKNVSRWKVGDQVCALLGG---GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP----GESFLVHGGSSGIGTFAIQMGKCQGVRV 618
            S TS   +V  M A VI + G  EVL+  Q +  P I   +EV+IKV A ++N  D   R G             +   KG      LG + SG ++  G +V  ++ GD+V A +     G  +E V V   +V   P  ++   AA+ P VA T WS +     LS     G+  L+ G S G+GTFAIQ+ K  G  V
Sbjct:   34 STTSARSTV--MPAWVIDKYGKNEVLRFTQNMMLPIIHYPNEVIIKVHAASVNPIDVNMRSGYGATALNMKRDPLHMKTKGEEFPLTLGRDVSGVVMECGLDVKYFQPGDEVWAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLSDKNCKGKRALILGASGGVGTFAIQVMKAWGAHV 232          
BLAST of FC869053 vs. ExPASy Swiss-Prot
Match: RT4I1_BOVIN (Reticulon-4-interacting protein 1, mitochondrial OS=Bos taurus GN=RTN4IP1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.266e-12
Identity = 63/190 (33.16%), Postives = 89/190 (46.84%), Query Frame = 1
Query:  118 MKAIVITQPGSPEVLQL-QEVEDPQIK-DDEVLIKVEATALNRADTLQRKGS------------YPPPKGAS--PHLGLECSGTILSVGKNVSRWKVGDQVCALLGG---GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP----GESFLVHGGSSGIGTFAIQMGKCQGVRV 618
            M A VI + GS EVL+  Q +  P I   +EV+IKV A ++N  D   R G             +   KG      LG + SG ++  G +V  +K GD+V A +     G  +E V V   +V   P  ++   AA+ P VA T WS +     L+     G+  L+ G S G+GTFAIQ+ K     V
Sbjct:   43 MPAWVIDKYGSNEVLRFTQNMMIPMIHYPNEVIIKVHAASINPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVRYFKPGDEVWAAVPPWKQGTLSEFVVVSGNEVSHKPRSLTHTQAASLPYVALTAWSAINKVGGLNDRNCTGKRVLILGASGGVGTFAIQVMKAWDAHV 232          
BLAST of FC869053 vs. ExPASy Swiss-Prot
Match: PKS2_DICDI (Probable polyketide synthase 2 OS=Dictyostelium discoideum GN=pks2 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.266e-12
Identity = 53/167 (31.74%), Postives = 85/167 (50.90%), Query Frame = 1
Query:  163 QLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPP------KGASPHLGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLS--PGESFLVHGGSSGIGTFAIQMGKCQGVR--VFVTAG 633
            QL+  E+ +I +  + +KV A+ +N  D L  +   P            P  G ECSG +  VG  V+++KVGD+V   LG       V +   + +  P  ++  +AA+ P V  T + ++F+  +LS    ES L+HGG+ GIG   I + K +G +  +FVT G
Sbjct: 1841 QLKPFEN-KIPEGFIEVKVLASGINFKDNLVYRRLVPNEAVNHTGNSNDPEFGYECSGIVSRVGDGVTKFKVGDEVVG-LGFNCTGSFVTLEQFRFVLKPKNLTHVEAASIPVVYLTSYYSLFVAGYLSIEKKESVLIHGGTGGIGLACINLLKAKGFKGYLFVTVG 2005          
The following BLAST results are available for this feature:
BLAST of FC869053 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
PKS45_DICDI1.506e-1329.88Probable polyketide synthase 45 OS=Dictyostelium d... [more]
QOR_SCHPO9.764e-1330.77Probable quinone oxidoreductase OS=Schizosaccharom... [more]
PKS18_DICDI9.764e-1331.90Probable polyketide synthase 18 OS=Dictyostelium d... [more]
YGD6_SCHPO1.666e-1230.39Zinc-type alcohol dehydrogenase-like protein C1773... [more]
ERYA2_SACER2.175e-1232.90Erythronolide synthase, modules 3 and 4 OS=Sacchar... [more]
MECR_DROME2.841e-1230.72Probable trans-2-enoyl-CoA reductase, mitochondria... [more]
QORH_ARATH4.846e-1230.64Putative quinone-oxidoreductase homolog, chloropla... [more]
RT4I1_MOUSE6.329e-1233.33Reticulon-4-interacting protein 1, mitochondrial O... [more]
RT4I1_BOVIN8.266e-1233.16Reticulon-4-interacting protein 1, mitochondrial O... [more]
PKS2_DICDI8.266e-1231.74Probable polyketide synthase 2 OS=Dictyostelium di... [more]

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Properties
Property NameValue
Genbank descriptionC31008A05EF AbioticL1 Citrus clementina cDNA clone C31008A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869053 ID=FC869053; Name=FC869053; organism=Citrus clementina; type=EST; length=634bp
ATTTTTCATGAAGTCAAAGGGGAAATGGGAAATGGGAAAAACATCATCAT
TTGCATTAGAATTGTATAAATAAATATTTTGGAATCATTTACTTCTACTC
TGGAAAGTGTAGGCACAATGAAGGCAATAGTGATAACTCAACCCGGTAGC
CCAGAAGTGCTGCAGTTGCAAGAAGTAGAAGACCCTCAAATCAAAGATGA
CGAAGTGTTGATCAAAGTCGAAGCTACTGCCCTGAACCGGGCCGACACTC
TTCAACGAAAAGGCTCCTACCCTCCACCCAAAGGCGCCAGCCCTCACCTG
GGTCTCGAATGTTCCGGAACCATCCTGTCCGTTGGTAAAAACGTCTCTAG
ATGGAAAGTCGGCGACCAGGTGTGTGCTCTGCTTGGTGGAGGAGGGTATG
CTGAGAAAGTGGCTGTTCCAGCTGGACAAGTTCTTCCCGTTCCATCTGGT
GTCTCACTCAAAGATGCTGCTGCGTTTCCGGAGGTGGCCTGCACTGTTTG
GTCAACGGTTTTCATGACCAGTCACCTATCCCCAGGGGAGTCATTTCTGG
TTCATGGGGGCTCTAGTGGAATTGGTACATTTGCGATTCAGATGGGAAAA
TGCCAAGGAGTGAGAGTCTTTGTTACAGCAGGGA
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