FC869060

Overview
NameFC869060
Unique NameFC869060
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length601
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869060 vs. ExPASy Swiss-Prot
Match: CHS5_SOYBN (Chalcone synthase 5 OS=Glycine max GN=CHS5 PE=3 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 7.095e-71
Identity = 129/179 (72.07%), Postives = 149/179 (83.24%), Query Frame = 2
Query:   65 MVTTEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAE 601
            MV+ EEIR+AQRAEG AT++AI TATPPNCV Q+ YPDYYF ITNSEHMT            SMI+KR+M L EEILK NP++C +M  SLDARQD+ ++EVPKLGKEAATKAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAE
Sbjct:    1 MVSVEEIRQAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMYLNEEILKENPSVCAYMAPSLDARQDMVVMEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVLRLAKDLAE 179          
BLAST of FC869060 vs. ExPASy Swiss-Prot
Match: CHS2_CITSI (Chalcone synthase 2 OS=Citrus sinensis GN=CHS2 PE=2 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 9.266e-71
Identity = 132/179 (73.74%), Postives = 146/179 (81.56%), Query Frame = 2
Query:   65 MVTTEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAE 601
            M T +EIR AQRA+G AT+LAI TATP + V QADYPDYYF IT SEHMT            SMI+KR+M LTEEILK NPNMC +M  SLDARQDI +VEVPKLGKEAATKAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+LIGL P VKR M+YQQGC+AG T+LRLAKDLAE
Sbjct:    1 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAE 179          
BLAST of FC869060 vs. ExPASy Swiss-Prot
Match: CHSY_VIGUN (Chalcone synthase OS=Vigna unguiculata GN=CHS PE=2 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 1.210e-70
Identity = 131/179 (73.18%), Postives = 148/179 (82.68%), Query Frame = 2
Query:   65 MVTTEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAE 601
            MV+  EIR+AQRAEG ATILAI TATPPNCV Q+ YPDYYF ITNSEHMT            SMI+KR+M +TEEILK NP+MC +M  SLDARQDI +VEVP+LGKEAA KAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAE
Sbjct:    1 MVSVSEIRQAQRAEGPATILAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFQRMCDKSMIKKRYMHVTEEILKENPSMCAYMAPSLDARQDIVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAE 179          
BLAST of FC869060 vs. ExPASy Swiss-Prot
Match: CHSB_PEA (Chalcone synthase 1B OS=Pisum sativum GN=CHS-1B PE=3 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 1.210e-70
Identity = 130/179 (72.63%), Postives = 149/179 (83.24%), Query Frame = 2
Query:   65 MVTTEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAE 601
            MVT +EIR+AQ+AEG AT+LAI TATPPNCV Q+ YPDYYF ITNSEH T            SMI+KR+M LTEEILK NP++C +M  SLDARQD+ +VEVPKLGKEAATKAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAE
Sbjct:    1 MVTVDEIRQAQKAEGPATVLAIGTATPPNCVDQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMIKKRYMHLTEEILKENPSVCEYMAPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPHVKRYMMYQQGCFAGGTVLRLAKDLAE 179          
BLAST of FC869060 vs. ExPASy Swiss-Prot
Match: CHS2_SOLTU (Chalcone synthase 2 OS=Solanum tuberosum GN=CHS2 PE=2 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 1.210e-70
Identity = 129/179 (72.07%), Postives = 148/179 (82.68%), Query Frame = 2
Query:   65 MVTTEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAE 601
            MVT EE+RKAQRA+G ATI+AI TATP NCV Q+ YPDYYF ITNSEHMT            SMI KR+M LTEEILK NPN+C +M  SLDARQDI +VEVPKLGKEAA KAIKEWGQPKS ITH++FCT++GVDMPGADYQLT+L+GL P VKR+M+YQQGC+AG T++RLAKDLAE
Sbjct:    1 MVTVEEVRKAQRAKGPATIMAIGTATPSNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMINKRYMHLTEEILKENPNICEYMAPSLDARQDIVVVEVPKLGKEAAQKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVIRLAKDLAE 179          
BLAST of FC869060 vs. ExPASy Swiss-Prot
Match: CHS1_CAMSI (Chalcone synthase 1 OS=Camellia sinensis GN=CHS1 PE=2 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 1.210e-70
Identity = 128/179 (71.51%), Postives = 148/179 (82.68%), Query Frame = 2
Query:   65 MVTTEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAE 601
            MVT E+IR+AQRAEG AT++AI TATPPNCV Q+ YPDYYF ITNSEH              SMI+KR+M LTEEILK NP +C +M  SLDARQD+ +VEVPKLGKEAATKAIKEWGQPKS ITHL+FCT++GVDMPGADYQLT+L+GL P VKR+M+YQQGC+AG T+LRLAKDLAE
Sbjct:    1 MVTVEDIRRAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHKAELKEKFKRMCDKSMIKKRYMYLTEEILKENPQVCEYMAPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAE 179          
BLAST of FC869060 vs. ExPASy Swiss-Prot
Match: CHS6_SOYBN (Chalcone synthase 6 OS=Glycine max GN=CHS6 PE=3 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 1.581e-70
Identity = 129/179 (72.07%), Postives = 148/179 (82.68%), Query Frame = 2
Query:   65 MVTTEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAE 601
            MV+ EEIRKAQRAEG AT++AI TATPPNCV Q+ YPDYYF ITNS+HM             SMI+KR+M L EEILK NP++C +M  SLDARQD+ +VEVPKLGKEAATKAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAE
Sbjct:    1 MVSVEEIRKAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSDHMNELKEKFKRMCDKSMIKKRYMYLNEEILKENPSVCAYMEPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVLRLAKDLAE 179          
BLAST of FC869060 vs. ExPASy Swiss-Prot
Match: CHSY_PHAVU (Chalcone synthase 17 OS=Phaseolus vulgaris GN=CHS17 PE=2 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 2.064e-70
Identity = 132/179 (73.74%), Postives = 146/179 (81.56%), Query Frame = 2
Query:   65 MVTTEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAE 601
            MV+  EIR+AQRAEG ATILAI TATP NCV Q+ YPDYYF ITNSEHMT            SMI+KR+M L EEILK NPNMC +M  SLDARQDI +VEVPKLGKEAA KAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAE
Sbjct:    1 MVSVSEIRQAQRAEGPATILAIGTATPSNCVDQSTYPDYYFRITNSEHMTDLKEKFQRMCDKSMIKKRYMHLNEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAE 179          
BLAST of FC869060 vs. ExPASy Swiss-Prot
Match: CHSY_BETVE (Chalcone synthase OS=Betula verrucosa GN=CHS PE=2 SV=2)

HSP 1 Score: 265.003 bits (676), Expect = 2.064e-70
Identity = 128/179 (71.51%), Postives = 145/179 (81.01%), Query Frame = 2
Query:   65 MVTTEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAE 601
            M + EEIRKAQRA G AT+LAI TATP NC+ QADYPDYYF IT S+HMT            SMI+KR+M L EEIL  NPNMC +M  SLDARQ I +VEVPKLGKEAATKAIKEWGQPKS ITHL+FCT++GVDMPGADYQLT+L+GL P VKR+M+YQQGC+AG T+LRLAKDLAE
Sbjct:    1 MASVEEIRKAQRAHGPATVLAIGTATPSNCITQADYPDYYFRITKSDHMTELKEKFKRMCDKSMIKKRYMYLNEEILNENPNMCAYMAPSLDARQTIVVVEVPKLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAE 179          
BLAST of FC869060 vs. ExPASy Swiss-Prot
Match: CHS2_RUTGR (Chalcone synthase 2 OS=Ruta graveolens GN=CHS2 PE=2 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 2.064e-70
Identity = 131/178 (73.60%), Postives = 144/178 (80.90%), Query Frame = 2
Query:   68 VTTEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAE 601
            VT EEIRKAQRA+G A +LAI TATP N V QADYPDYYF IT SEHMT            SMIRKR+M LTE+ILK NPNMC +M  SLDARQDI +VEVPKLGKEAA KAIKEWGQPKS ITHLIFCT++GVDMPG DYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAE
Sbjct:    4 VTVEEIRKAQRADGPAAVLAIGTATPANYVTQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIRKRYMYLTEDILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGCDYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAE 181          
The following BLAST results are available for this feature:
BLAST of FC869060 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
CHS5_SOYBN7.095e-7172.07Chalcone synthase 5 OS=Glycine max GN=CHS5 PE=3 SV... [more]
CHS2_CITSI9.266e-7173.74Chalcone synthase 2 OS=Citrus sinensis GN=CHS2 PE=... [more]
CHSY_VIGUN1.210e-7073.18Chalcone synthase OS=Vigna unguiculata GN=CHS PE=2... [more]
CHSB_PEA1.210e-7072.63Chalcone synthase 1B OS=Pisum sativum GN=CHS-1B PE... [more]
CHS2_SOLTU1.210e-7072.07Chalcone synthase 2 OS=Solanum tuberosum GN=CHS2 P... [more]
CHS1_CAMSI1.210e-7071.51Chalcone synthase 1 OS=Camellia sinensis GN=CHS1 P... [more]
CHS6_SOYBN1.581e-7072.07Chalcone synthase 6 OS=Glycine max GN=CHS6 PE=3 SV... [more]
CHSY_PHAVU2.064e-7073.74Chalcone synthase 17 OS=Phaseolus vulgaris GN=CHS1... [more]
CHSY_BETVE2.064e-7071.51Chalcone synthase OS=Betula verrucosa GN=CHS PE=2 ... [more]
CHS2_RUTGR2.064e-7073.60Chalcone synthase 2 OS=Ruta graveolens GN=CHS2 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC31008A12EF AbioticL1 Citrus clementina cDNA clone C31008A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869060 ID=FC869060; Name=FC869060; organism=Citrus clementina; type=EST; length=601bp
AAGCGCAAACTTATCAATTAACTAAGATATAAGTACTGTTTTGGAAGCAA
TCTGACGATCAGAGATGGTAACAACGGAGGAGATTAGAAAGGCTCAGCGA
GCCGAGGGCCTGGCGACCATCCTCGCCATCAGCACGGCAACGCCGCCCAA
TTGTGTCATCCAAGCTGATTATCCTGACTATTACTTCGGGATCACCAACA
GCGAGCACATGACTGAGCTCAAAGAGAAGTTCAAGCTCTTGTGTGAGAAG
TCGATGATAAGAAAGCGTCACATGTGCTTAACAGAAGAGATTTTAAAAGC
AAACCCTAATATGTGCTTACACATGGGGACATCACTCGATGCGCGCCAGG
ACATTTCTCTTGTTGAAGTACCAAAGCTTGGCAAAGAGGCGGCAACCAAA
GCTATCAAAGAATGGGGACAGCCCAAATCCAATATCACCCATCTCATTTT
CTGCACATCTGCAGGCGTCGACATGCCTGGCGCTGACTATCAGCTCACAA
GACTCATCGGCCTCAACCCGGATGTTAAGCGTATGATGATATATCAACAA
GGGTGTTATGCTGGCGCCACCATCCTTCGTCTTGCTAAAGATCTGGCTGA
A
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