FC869193
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869193 vs. ExPASy Swiss-Prot
Match: LH18_EUGGR (Light-harvesting complex I LH38 proteins (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.829e-14 Identity = 64/159 (40.25%), Postives = 82/159 (51.57%), Query Frame = 3 Query: 237 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAI*ACQVVLMGAVEGYRIAGGPL---GEVTDPLYPGGSFDPLGLADDPELLLSSSVRNQEWRLAM 704 PP YLTGE GD G+D AGL+ADP TF + + EV HCR +ML +GC+ PELL G WF QI+ + +D+ + A+ A QVV +E +R GG L E D YPG FDPL L E + ++N RLAM Sbjct: 380 PPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELL-------GNGAWF----QIWDK--VDF----------NRFAVVALQVV--APLEYWRGNGGFLWNDEETVDQSYPG--FDPLNLT--TEYTKEAEIKN--GRLAM 507 HSP 2 Score: 76.6406 bits (187), Expect = 1.404e-13 Identity = 52/144 (36.11%), Postives = 70/144 (48.61%), Query Frame = 3 Query: 228 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAI*ACQVVLMGAVEGYRIAGG---PLGEVTDPLYPGGSFDPLGLADD 650 + EPP+ LTGE+P D G+D L+ADP+ +A+ R EV H R AML +GC+ PELL G+ WF+AG + L + + + E +R GG GE+ D YPG FDPL L D Sbjct: 193 NAEPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCTVGCIVPELL-------GKGAWFEAGDSVDG------------------LKLGFITMAIAAPTEYWRGQGGFNWQKGEL-DRSYPG--FDPLNLTTD 308 HSP 3 Score: 67.3958 bits (163), Expect = 8.517e-11 Identity = 49/140 (35.00%), Postives = 69/140 (49.29%), Query Frame = 3 Query: 240 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAI*ACQVVLMGAVEG-YRIAGGPLGEVTDP--LYPGGSFDPLGLADD 650 PS+L GE+ GD G+D AGL+ADP+TF + R EV H R AML +G + P+ L G+ +W++A I +V + A G + +A G + E +DP +YPG FDPL L D Sbjct: 12 PSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAVVGALVPDYL-------GKGIWYEAAQN---------------------AGIGLKEVAIFTAAYGVFEVARG-VKENSDPTTIYPG--FDPLNLTTD 120
BLAST of FC869193 vs. ExPASy Swiss-Prot
Match: CB21_EUGGR (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.302e-14 Identity = 45/75 (60.00%), Postives = 52/75 (69.33%), Query Frame = 3 Query: 492 SLIHAQSILAI*ACQVVLMGAVEGYRI---AGGPLGEVTDPLYPGGSFDPLGLADDPELLLSSSVRN-QEWRLAM 704 +LIHA+S+LAI A QV+LMGAVEGYR A G GE D LYPGG FDPLGLADDP+ V+ + RLAM Sbjct: 4 ALIHAKSLLAILATQVLLMGAVEGYRAGNTAPGQFGEDLDRLYPGGPFDPLGLADDPDTFPELKVKEIKNGRLAM 78 The following BLAST results are available for this feature:
BLAST of FC869193 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC869193 ID=FC869193; Name=FC869193; organism=Citrus clementina; type=EST; length=704bpback to top |