FC869243

Overview
NameFC869243
Unique NameFC869243
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length596
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ALDA_STAEQ (Putative aldehyde dehydrogenase aldA OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=aldA PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 7.000e-39
Identity = 79/164 (48.17%), Postives = 109/164 (66.46%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAR 492
            GV G +V WNFP+LL +WK+ PAL  GNT+V++ +  TPL+ + +AK+F E  LP GV+NV++G G  +G A+  H  VDKLSFTG  D G  V +  A+  + P TLELGGKS  IIFDDA+++Q +E     + +NQG+ C AGSR  V   +YDE + K +
Sbjct:  151 GVVGAVVAWNFPILLASWKLGPALAAGNTVVIQPSSSTPLSLIELAKIFQEV-LPKGVVNVLTGKGSESGDAIFHHEGVDKLSFTGSTDVGYGVAQAGAE-RIVPTTLELGGKSANIIFDDANLEQVIEGVQLGILFNQGEVCSAGSRLLVQSSIYDELLPKLK 312          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_PECCP (Betaine aldehyde dehydrogenase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=betB PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 9.142e-39
Identity = 78/162 (48.15%), Postives = 109/162 (67.28%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV   I  WN+P+ +  WK APAL  GN ++ K +E T LTAL +A+++ EAGLP GV NV++G G + G AL +H  + K+SFTG   +GK V   AA S LK VT+ELGGKSP I+F+DAD+D+A ++A  A F++ GQ C  G+R +V + +  +F EK
Sbjct:  144 GVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTSLTALKLAEVYTEAGLPAGVFNVLTGTGQSVGQALTTHPGIAKVSFTGGIASGKTVMANAAGSTLKDVTMELGGKSPLIVFEDADLDKAADIAMMANFFSSGQVCTNGTRVFVPQALQTQFEEK 305          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_XANCP (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. campestris GN=betB PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.194e-38
Identity = 77/151 (50.99%), Postives = 103/151 (68.21%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYV 453
            GV G I  WN+P+ +  WK APAL  GN ++ K +E TPLTAL +A++F EAGLP GV NV+ G G + G AL  H +++K+SFTG   TG+ V   A+ S+LK VT+ELGGKSP I+  DAD+D A ++A  A FY+ GQ C  G+R +V
Sbjct:  144 GVVGAIGAWNYPIQIALWKAAPALAAGNAMIFKPSEVTPLTALKLAEIFTEAGLPDGVFNVLPGDGASVGHALTEHPEIEKISFTGGTATGRKVMASASSSSLKDVTMELGGKSPLIVCADADLDLAADIAMMANFYSSGQVCTNGTRVFV 294          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_XANCB (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. campestris (strain B100) GN=betB PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.194e-38
Identity = 77/151 (50.99%), Postives = 103/151 (68.21%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYV 453
            GV G I  WN+P+ +  WK APAL  GN ++ K +E TPLTAL +A++F EAGLP GV NV+ G G + G AL  H +++K+SFTG   TG+ V   A+ S+LK VT+ELGGKSP I+  DAD+D A ++A  A FY+ GQ C  G+R +V
Sbjct:  144 GVVGAIGAWNYPIQIALWKAAPALAAGNAMIFKPSEVTPLTALKLAEIFTEAGLPDGVFNVLPGDGASVGHALTEHPEIEKISFTGGTATGRKVMASASSSSLKDVTMELGGKSPLIVCADADLDLAADIAMMANFYSSGQVCTNGTRVFV 294          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_XANC8 (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=betB PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.194e-38
Identity = 77/151 (50.99%), Postives = 103/151 (68.21%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYV 453
            GV G I  WN+P+ +  WK APAL  GN ++ K +E TPLTAL +A++F EAGLP GV NV+ G G + G AL  H +++K+SFTG   TG+ V   A+ S+LK VT+ELGGKSP I+  DAD+D A ++A  A FY+ GQ C  G+R +V
Sbjct:  144 GVVGAIGAWNYPIQIALWKAAPALAAGNAMIFKPSEVTPLTALKLAEIFTEAGLPDGVFNVLPGDGASVGHALTEHPEIEKISFTGGTATGRKVMASASSSSLKDVTMELGGKSPLIVCADADLDLAADIAMMANFYSSGQVCTNGTRVFV 294          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_XANC5 (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=betB PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.194e-38
Identity = 77/151 (50.99%), Postives = 102/151 (67.55%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYV 453
            GV G I  WN+P+ +  WK APAL  GN ++ K +E TPLTAL +A++F EAGLP GV NV+ G G + G AL  H  ++K+SFTG   TG+ V   A+ S+LK VT+ELGGKSP I+  DAD+D A ++A  A FY+ GQ C  G+R +V
Sbjct:  144 GVVGAIGAWNYPIQIALWKAAPALAAGNAMIFKPSEVTPLTALKLAEIFTEAGLPDGVFNVLPGDGASVGTALTEHPQIEKISFTGGTATGRKVMASASSSSLKEVTMELGGKSPLIVCADADLDLAADIAMMANFYSSGQVCTNGTRVFV 294          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_XANAC (Betaine aldehyde dehydrogenase OS=Xanthomonas axonopodis pv. citri GN=betB PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.194e-38
Identity = 77/151 (50.99%), Postives = 102/151 (67.55%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYV 453
            GV G I  WN+P+ +  WK APAL  GN ++ K +E TPLTAL +A++F EAGLP GV NV+ G G + G AL  H  ++K+SFTG   TG+ V   A+ S+LK VT+ELGGKSP I+  DAD+D A ++A  A FY+ GQ C  G+R +V
Sbjct:  144 GVVGAIGAWNYPIQIALWKAAPALAAGNAMIFKPSEVTPLTALKLAEIFTEAGLPDGVFNVLPGDGASVGTALTEHPQIEKISFTGGTATGRKVMASASSSSLKEVTMELGGKSPLIVCADADLDVAADIAMMANFYSSGQVCTNGTRVFV 294          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ALDH_DEIRA (Aldehyde dehydrogenase OS=Deinococcus radiodurans GN=aldA PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.194e-38
Identity = 88/170 (51.76%), Postives = 115/170 (67.65%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIF------DDADVDQAVE-LAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 489
            GV GQI+PWNFPLL+  WK+APAL  GN +VLK AEQTP + + + +L  +  LP GV+NVV+G+G  AG  LAS   + K++FTG  +TG+++   AA  NL PVTLELGGKSP I F      DDA +D+AVE +  FAL  NQG+ C   SR  + E +YD F+E+A
Sbjct:  166 GVVGQIIPWNFPLLMGVWKLAPALAAGNAVVLKPAEQTPASIMVLMELIADL-LPEGVVNVVNGFGLEAGKPLASSPRIAKIAFTGETNTGRLIMGYAA-DNLIPVTLELGGKSPNIFFDDVMMEDDAFLDKAVEGMVMFAL--NQGEVCTCPSRALIQESIYDRFMERA 331          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: AL8A1_HUMAN (Aldehyde dehydrogenase family 8 member A1 OS=Homo sapiens GN=ALDH8A1 PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.559e-38
Identity = 79/177 (44.63%), Postives = 115/177 (64.97%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKARHVQ*GVLLAIPSE 531
            GVAG I PWN PL L TWK+APA+  GNT++ K +E T +TA  + KL  +AG+PPGV+N+V G GP  G AL SH +V  +SFTG   T + + +L+A  + K ++LELGGK+P IIF+DA++D+ +     + F NQG+ C   SR +V + +Y EF+++         + IPS+
Sbjct:  146 GVAGLISPWNLPLYLLTWKIAPAMAAGNTVIAKPSELTSVTAWMLCKLLDKAGVPPGVVNIVFGTGPRVGEALVSHPEVPLISFTGSQPTAERITQLSA-PHCKKLSLELGGKNPAIIFEDANLDECIPATVRSSFANQGEICLCTSRIFVQKSIYSEFLKRFVEATRKWKVGIPSD 321          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: HPCC_ECOLX (5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase OS=Escherichia coli GN=hpcC PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.037e-38
Identity = 83/172 (48.26%), Postives = 112/172 (65.12%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV---EKARHVQ*G 507
            GV   + PWN P +  TWKVAP L  G T VLK +E +PLTA  + +L  EAG+P GVLNVV GYG TAG AL  H DV  +SFTG   TG+ + +    + LK  ++ELGGKSP +IF+DAD+++A++ A F +F   G+ C AGSR ++ + +Y EFV   E+A  V+ G
Sbjct:  139 GVCALVSPWNVPFMTATWKVAPCLALGITAVLKMSELSPLTADRLGELALEAGIPAGVLNVVQGYGATAGDALVRHHDVRAVSFTGGTATGRNIMK---NAGLKKYSMELGGKSPVLIFEDADIERALDAALFTIFSINGERCTAGSRIFIQQSIYPEFVKFAERANRVRVG 307          
The following BLAST results are available for this feature:
BLAST of FC869243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ALDA_STAEQ7.000e-3948.17Putative aldehyde dehydrogenase aldA OS=Staphyloco... [more]
BETB_PECCP9.142e-3948.15Betaine aldehyde dehydrogenase OS=Pectobacterium c... [more]
BETB_XANCP1.194e-3850.99Betaine aldehyde dehydrogenase OS=Xanthomonas camp... [more]
BETB_XANCB1.194e-3850.99Betaine aldehyde dehydrogenase OS=Xanthomonas camp... [more]
BETB_XANC81.194e-3850.99Betaine aldehyde dehydrogenase OS=Xanthomonas camp... [more]
BETB_XANC51.194e-3850.99Betaine aldehyde dehydrogenase OS=Xanthomonas camp... [more]
BETB_XANAC1.194e-3850.99Betaine aldehyde dehydrogenase OS=Xanthomonas axon... [more]
ALDH_DEIRA1.194e-3851.76Aldehyde dehydrogenase OS=Deinococcus radiodurans ... [more]
AL8A1_HUMAN1.559e-3844.63Aldehyde dehydrogenase family 8 member A1 OS=Homo ... [more]
HPCC_ECOLX2.037e-3848.265-carboxymethyl-2-hydroxymuconate semialdehyde deh... [more]

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Properties
Property NameValue
Genbank descriptionC31010B01EF AbioticL1 Citrus clementina cDNA clone C31010B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869243 ID=FC869243; Name=FC869243; organism=Citrus clementina; type=EST; length=596bp
GGCGTTGCTGGCCAGATAGTTCCCTGGAACTTTCCTCTTCTCTTGTTTAC
TTGGAAAGTAGCGCCTGCACTAACTTGTGGCAATACTATTGTTCTAAAGT
CTGCTGAGCAAACGCCTTTGACTGCTCTGTATGTGGCAAAGCTATTCCAT
GAGGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCC
AACAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTT
TTACAGGACACTGTGATACTGGTAAGATTGTTCAGGAACTGGCTGCAAAA
AGCAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTAT
AATATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTG
CTTTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTAT
GTACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAGGCACGTGCA
ATGAGGCGTATTGTTGGCGATCCCTTCAGAGTGGTGTTGAACAAGGTCCT
CAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAAGTACATAAGGT
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