FC869243

Overview
NameFC869243
Unique NameFC869243
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length596
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_PSESM (Betaine aldehyde dehydrogenase OS=Pseudomonas syringae pv. tomato GN=betB PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.037e-38
Identity = 77/162 (47.53%), Postives = 106/162 (65.43%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV   I  WN+P+ +  WK APAL  GN ++ K +E T LT L +A+++ EAG+P GV NV++G G   G  +  H  ++K+SFTG  DTGK V   A+ S+LK VT+ELGGKSP I+FDDAD+D+A ++A  A FY+ GQ C  G+R +V   +  EF  K
Sbjct:  144 GVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTSLTTLKLAEIYTEAGVPNGVFNVLTGSGREVGTWITEHPRIEKVSFTGGTDTGKKVMASASSSSLKEVTMELGGKSPLIVFDDADLDRAADIAMMANFYSSGQVCTNGTRVFVPNALKGEFEAK 305          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ALDH_VIBCH (Aldehyde dehydrogenase OS=Vibrio cholerae GN=aldA PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.370e-38
Identity = 82/168 (48.81%), Postives = 114/168 (67.86%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIF------DDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV GQI+PWNFPLL+  WK+APAL  G T+VLK AEQTP++ L++ ++  +  +P GV+NVV+G+G  AG ALA+   +DKL+FTG  + G  + + AA  NL P T+ELGGKSP I F      +D  +D+ +E A  A F+NQG+ C   SR  VHE +Y++F+ K
Sbjct:  156 GVVGQIIPWNFPLLMAAWKLAPALAAGCTVVLKPAEQTPVSILFLMEIIGDL-IPAGVINVVNGFGSEAGNALATSQRIDKLAFTGSTEIGNHILKCAA-DNLIPSTIELGGKSPNIYFPDIFSHEDQYLDKCIEGALLA-FFNQGEVCTCPSRILVHESIYEKFIAK 320          

HSP 2 Score: 24.2534 bits (51), Expect = 2.370e-38
Identity = 9/24 (37.50%), Postives = 16/24 (66.67%), Query Frame = 2
Query:  524 LQSGVEQGPQIDPEQFEKVLKYIR 595
            L +  + G Q+  EQ++K+L YI+
Sbjct:  334 LDTETQIGAQVSKEQYDKILGYIQ 357          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ALDH_VIBC3 (Aldehyde dehydrogenase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=aldA PE=3 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 2.370e-38
Identity = 82/168 (48.81%), Postives = 114/168 (67.86%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIF------DDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV GQI+PWNFPLL+  WK+APAL  G T+VLK AEQTP++ L++ ++  +  +P GV+NVV+G+G  AG ALA+   +DKL+FTG  + G  + + AA  NL P T+ELGGKSP I F      +D  +D+ +E A  A F+NQG+ C   SR  VHE +Y++F+ K
Sbjct:  156 GVVGQIIPWNFPLLMAAWKLAPALAAGCTVVLKPAEQTPVSILFLMEIIGDL-IPAGVINVVNGFGSEAGNALATSQRIDKLAFTGSTEIGNHILKCAA-DNLIPSTIELGGKSPNIYFPDIFSHEDQYLDKCIEGALLA-FFNQGEVCTCPSRILVHESIYEKFIAK 320          

HSP 2 Score: 24.2534 bits (51), Expect = 2.370e-38
Identity = 9/24 (37.50%), Postives = 16/24 (66.67%), Query Frame = 2
Query:  524 LQSGVEQGPQIDPEQFEKVLKYIR 595
            L +  + G Q+  EQ++K+L YI+
Sbjct:  334 LDTETQIGAQVSKEQYDKILGYIQ 357          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_PSEU2 (Betaine aldehyde dehydrogenase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=betB PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.660e-38
Identity = 77/162 (47.53%), Postives = 106/162 (65.43%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV   I  WN+P+ +  WK APAL  GN ++ K +E T LT L +A+++ EAG+P GV NV++G G   G  +  H  ++K+SFTG  DTGK V   A+ S+LK VT+ELGGKSP I+FDDAD+D+A ++A  A FY+ GQ C  G+R +V   +  EF  K
Sbjct:  144 GVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTSLTTLKLAEIYTEAGVPNGVFNVLTGSGREVGTWITEHPRIEKVSFTGGTDTGKKVMASASSSSLKEVTMELGGKSPLIVFDDADLDRAADIAMMANFYSSGQVCTNGTRVFVPNALKAEFEAK 305          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_PSE14 (Betaine aldehyde dehydrogenase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=betB PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.660e-38
Identity = 77/162 (47.53%), Postives = 106/162 (65.43%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV   I  WN+P+ +  WK APAL  GN ++ K +E T LT L +A+++ EAG+P GV NV++G G   G  +  H  ++K+SFTG  DTGK V   A+ S+LK VT+ELGGKSP I+FDDAD+D+A ++A  A FY+ GQ C  G+R +V   +  EF  K
Sbjct:  144 GVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTSLTTLKLAEIYTEAGVPNGVFNVLTGSGREVGTWITEHPRIEKVSFTGGTDTGKKVMASASSSSLKEVTMELGGKSPLIVFDDADLDRAADIAMMANFYSSGQVCTNGTRVFVPNALKAEFEAK 305          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: AL9A1_BOVIN (4-trimethylaminobutyraldehyde dehydrogenase OS=Bos taurus GN=ALDH9A1 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.660e-38
Identity = 79/162 (48.77%), Postives = 105/162 (64.81%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV   I  WN+P  +  WK APAL CGN +V K +  TP++ L +A+++ EAG+PPG+ NVV G G   G  L  H DV K+SFTG   TG  + E++AK  +KPVTLELGGKSP IIF D D+  AV+ A  A F  QG+ CC G+R +V + + D+F E+
Sbjct:  148 GVCVGIGAWNYPFQIACWKSAPALACGNAMVFKPSPFTPVSVLLLAEIYTEAGVPPGLFNVVQG-GAATGQFLCQHRDVAKVSFTGSVPTGSKIMEMSAK-GIKPVTLELGGKSPLIIFSDCDMKNAVKGALMANFLTQGEVCCNGTRVFVQKEILDQFTEE 307          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: XYLG_PSEPU (2-hydroxymuconic semialdehyde dehydrogenase OS=Pseudomonas putida GN=xylG PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 3.474e-38
Identity = 80/165 (48.48%), Postives = 106/165 (64.24%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGY-GPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAR 492
            GV G I PWN PLLL TWKV PAL CGN +V+K +E+TPLTA  + ++   AG+P GV NVV G+ G +AGA L  H DVD  +FTG   TG+ +   AAK  ++ V+LELGGK+  I+F D D+D+A+E    + F N GQ C    R YV   ++D FV + +
Sbjct:  146 GVIGVISPWNLPLLLMTWKVGPALACGNCVVVKPSEETPLTATLLGEVMQAAGVPAGVYNVVHGFGGDSAGAFLTEHPDVDAYTFTGETGTGETIMRAAAK-GVRQVSLELGGKNAGIVFADCDMDKAIEGTLRSAFANCGQVCLGTERVYVERPIFDAFVARLK 309          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_PSEF5 (Betaine aldehyde dehydrogenase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=betB PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 3.474e-38
Identity = 79/162 (48.77%), Postives = 104/162 (64.20%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV   I  WN+P+ +  WK APAL  GN ++ K +E T LT L +A+++ EAGLP GV NV++G G   G  L  H  ++K+SFTG  DTGK V   A+ S+LK VT+ELGGKSP IIFDDAD+D+A + A  A FY+ GQ C  G+R +V   +   F  K
Sbjct:  144 GVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTSLTTLKLAEIYTEAGLPDGVFNVLTGSGREVGTWLTEHPRIEKVSFTGGTDTGKKVMASASSSSLKDVTMELGGKSPLIIFDDADLDRAADTAMMANFYSSGQVCTNGTRVFVPSHLKAAFEAK 305          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_SERP5 (Betaine aldehyde dehydrogenase OS=Serratia proteamaculans (strain 568) GN=betB PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 4.537e-38
Identity = 80/162 (49.38%), Postives = 104/162 (64.20%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV   I  WN+P+ +  WK APAL  GN ++ K +E T LTAL +A+++ EAGLP GV NVV+G G   G  L  H  + K+SFTG   TGK V   A+ S LK VT+ELGGKSP IIFDDAD+D+A ++A  A FY+ GQ C  G+R +V   +  +F  K
Sbjct:  144 GVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTSLTALKLAEIYTEAGLPDGVFNVVTGSGAEVGQYLTDHPGIAKVSFTGGVKTGKKVMANASGSTLKEVTMELGGKSPLIIFDDADLDRAADIAMMANFYSSGQVCTNGTRVFVPAALQAQFEAK 305          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_RHIL3 (Betaine aldehyde dehydrogenase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=betB PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 4.537e-38
Identity = 83/177 (46.89%), Postives = 111/177 (62.71%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKARHVQ*GVLLAIPSE 531
            GV   I  WN+P  +  WK APAL CGN +V K +E TPL AL +A++ HEAGLP G+ NV+ G   T G  L +H DV K+S TG   TG+ V   AA  NLK VT+ELGGKSP ++FDDAD+D AV  A    FY+ GQ C  G+R +V + + DEF+++ +     +L+  P +
Sbjct:  144 GVCVGIGAWNYPQQIACWKAAPALVCGNAMVFKPSENTPLGALKIAEILHEAGLPKGLFNVIQGDRDT-GPLLVNHPDVAKVSLTGSVPTGRRV-AAAAAGNLKHVTMELGGKSPLVVFDDADLDSAVGGAMLGNFYSTGQVCSNGTRVFVQKTIKDEFLKRLKVRTEAMLIGDPMD 318          
The following BLAST results are available for this feature:
BLAST of FC869243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BETB_PSESM2.037e-3847.53Betaine aldehyde dehydrogenase OS=Pseudomonas syri... [more]
ALDH_VIBCH2.370e-3848.81Aldehyde dehydrogenase OS=Vibrio cholerae GN=aldA ... [more]
ALDH_VIBC32.370e-3848.81Aldehyde dehydrogenase OS=Vibrio cholerae serotype... [more]
BETB_PSEU22.660e-3847.53Betaine aldehyde dehydrogenase OS=Pseudomonas syri... [more]
BETB_PSE142.660e-3847.53Betaine aldehyde dehydrogenase OS=Pseudomonas syri... [more]
AL9A1_BOVIN2.660e-3848.774-trimethylaminobutyraldehyde dehydrogenase OS=Bos... [more]
XYLG_PSEPU3.474e-3848.482-hydroxymuconic semialdehyde dehydrogenase OS=Pse... [more]
BETB_PSEF53.474e-3848.77Betaine aldehyde dehydrogenase OS=Pseudomonas fluo... [more]
BETB_SERP54.537e-3849.38Betaine aldehyde dehydrogenase OS=Serratia proteam... [more]
BETB_RHIL34.537e-3846.89Betaine aldehyde dehydrogenase OS=Rhizobium legumi... [more]

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Properties
Property NameValue
Genbank descriptionC31010B01EF AbioticL1 Citrus clementina cDNA clone C31010B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869243 ID=FC869243; Name=FC869243; organism=Citrus clementina; type=EST; length=596bp
GGCGTTGCTGGCCAGATAGTTCCCTGGAACTTTCCTCTTCTCTTGTTTAC
TTGGAAAGTAGCGCCTGCACTAACTTGTGGCAATACTATTGTTCTAAAGT
CTGCTGAGCAAACGCCTTTGACTGCTCTGTATGTGGCAAAGCTATTCCAT
GAGGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCC
AACAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTT
TTACAGGACACTGTGATACTGGTAAGATTGTTCAGGAACTGGCTGCAAAA
AGCAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTAT
AATATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTG
CTTTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTAT
GTACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAGGCACGTGCA
ATGAGGCGTATTGTTGGCGATCCCTTCAGAGTGGTGTTGAACAAGGTCCT
CAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAAGTACATAAGGT
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