FC869243

Overview
NameFC869243
Unique NameFC869243
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length596
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_BURP8 (Betaine aldehyde dehydrogenase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=betB PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 4.537e-38
Identity = 78/173 (45.09%), Postives = 115/173 (66.47%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEF----VEKARHVQ*G 507
            GV   I  WN+P+ +  WK APAL  GN ++ K +E TPL+A  +A+++ EAG+P GV NVV G G   GA L++H  + K+SFTG  +TGK V  +A  S+LK VT+ELGGKSP ++F+DAD+D+A ++A  A F++ GQ C  G+R +VH+ V   F    +E+ + ++ G
Sbjct:  144 GVTAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLSASKLAEIYLEAGVPAGVFNVVQGDG-RVGAMLSAHPGIAKISFTGGVETGKKVMSMAGGSSLKEVTMELGGKSPLVVFEDADLDRAADIAVTANFFSAGQVCTNGTRVFVHQSVQPAFEARVIERVKRIRVG 315          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_PSEAE (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa GN=betB PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 5.926e-38
Identity = 77/162 (47.53%), Postives = 105/162 (64.81%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV   I  WN+P+ +  WK APAL  GN ++ K +E TPLTAL +A+++ EAG+P GV NV++G G   G  L  H  ++K+SFTG   TGK V   A+ S+LK VT+ELGGKSP IIF DAD+D+A ++A  A F++ GQ C  G+R ++H      F  K
Sbjct:  144 GVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAK 305          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_PSEA8 (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa (strain LESB58) GN=betB PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 5.926e-38
Identity = 77/162 (47.53%), Postives = 105/162 (64.81%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV   I  WN+P+ +  WK APAL  GN ++ K +E TPLTAL +A+++ EAG+P GV NV++G G   G  L  H  ++K+SFTG   TGK V   A+ S+LK VT+ELGGKSP IIF DAD+D+A ++A  A F++ GQ C  G+R ++H      F  K
Sbjct:  144 GVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAK 305          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_PSEA7 (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa (strain PA7) GN=betB PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 5.926e-38
Identity = 77/162 (47.53%), Postives = 105/162 (64.81%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV   I  WN+P+ +  WK APAL  GN ++ K +E TPLTAL +A+++ EAG+P GV NV++G G   G  L  H  ++K+SFTG   TGK V   A+ S+LK VT+ELGGKSP IIF DAD+D+A ++A  A F++ GQ C  G+R ++H      F  K
Sbjct:  144 GVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAK 305          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BADH_GADCA (Betaine aldehyde dehydrogenase OS=Gadus callarias GN=aldh9A1 PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 5.926e-38
Identity = 77/162 (47.53%), Postives = 108/162 (66.67%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV   I+ WN+P ++  WK APAL CGN +V K +  TP+T + +A++FHEAG+P G++NVV G G   G+ L  H +V K+SFTG   TGK V E++AK+ +K VTLELGGKSP +IF D +++ AV  A  A F  QGQ C  G+R +V   +  +F+E+
Sbjct:  157 GVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKT-VKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEE 316          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_PSEFS (Betaine aldehyde dehydrogenase OS=Pseudomonas fluorescens (strain SBW25) GN=betB PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 7.739e-38
Identity = 76/162 (46.91%), Postives = 106/162 (65.43%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV   I  WN+P+ +  WK APAL  GN ++ K +E T LT L +A+++ EAG+P GV NV++G G   G  L  H  ++K+SFTG  DTGK V   A+ S+LK VT+ELGGKSP I+F+DAD+D+A ++A  A FY+ GQ C  G+R +V + +   F  K
Sbjct:  144 GVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTSLTTLKLAEIYTEAGVPAGVFNVLTGSGREVGTWLTEHPRIEKVSFTGGTDTGKKVMASASSSSLKEVTMELGGKSPLIVFEDADLDRAADIAMMANFYSSGQVCTNGTRVFVPKHLQAAFEAK 305          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: AMNC_PSESP (2-aminomuconic 6-semialdehyde dehydrogenase OS=Pseudomonas sp. GN=amnC PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 7.739e-38
Identity = 75/160 (46.88%), Postives = 102/160 (63.75%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGP-TAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEF 477
            GV G I PWN PLLL TWKVAPAL CGN +V+K +E TP TA  +A++    G+PPGV N+V G+GP +AG  ++ H D+  ++FTG   TG  +   AA+  +KPV+ ELGGK+  +IF D D ++ ++    ALF N GQ C    R YV   ++D F
Sbjct:  144 GVVGVISPWNLPLLLLTWKVAPALACGNAVVVKPSEDTPGTATLLAEVMEAVGIPPGVFNLVHGFGPNSAGEFISQHPDISAITFTGESKTGSTIMRAAAE-GVKPVSFELGGKNAAVIFADCDFEKMLDGMMRALFLNSGQVCLCSERVYVERPIFDRF 302          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: AL8A1_MOUSE (Aldehyde dehydrogenase family 8 member A1 OS=Mus musculus GN=Aldh8a1 PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 7.739e-38
Identity = 74/162 (45.68%), Postives = 108/162 (66.67%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            G+AG I PWN PL L TWK+APA+  GNT++ K +E T +TA    KL  +AG+PPGV+N+V G GP  G AL SH +V  +SFTG   T + + +L+A  + K ++LELGGK+P IIF+DA++++ +     + F NQG+ C   SR +V   +Y EF+++
Sbjct:  146 GIAGLISPWNLPLYLLTWKIAPAIAAGNTVIAKPSEMTSVTAWMFCKLLDKAGVPPGVINIVFGTGPRVGEALVSHPEVPLISFTGSQPTAERITQLSA-PHCKKLSLELGGKNPAIIFEDANLEECIPATVRSSFANQGEICLCTSRIFVQRSIYSEFLKR 306          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: FEAB_ECOLI (Phenylacetaldehyde dehydrogenase OS=Escherichia coli (strain K12) GN=feaB PE=1 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 1.011e-37
Identity = 84/160 (52.50%), Postives = 101/160 (63.12%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 480
            GV   IVPWNFPL++  WKV PAL  G +IV+K +E TPLT L VA+L  EAG+P GV NVV+G G   GAAL SH  V K+SFTG   TGK +   AA  +L  VTLELGGK+P I+  DAD    +E      F NQGQ C A SR Y+   ++D  V
Sbjct:  165 GVVAGIVPWNFPLMIGMWKVMPALAAGCSIVIKPSETTPLTMLRVAELASEAGIPDGVFNVVTGSGAVCGAALTSHPHVAKISFTGSTATGKGIARTAA-DHLTRVTLELGGKNPAIVLKDADPQWVIEGLMTGSFLNQGQVCAASSRIYIEAPLFDTLV 323          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ALDH_MYCTU (Probable aldehyde dehydrogenase OS=Mycobacterium tuberculosis GN=Rv0458 PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.011e-37
Identity = 87/170 (51.18%), Postives = 112/170 (65.88%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDA------DVDQAVE-LAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 489
            GV GQI+PWNFP+L+  WK+APAL  GNT VLK AEQTP + LY+  L  +  LPPGV+NVV+G+G  AG  LAS   + K++FTG   TG+++ + A+  NL PVTLELGGKSP I F D         D+A+E    FAL  NQG+ C   SR+ +   +YDEF+E A
Sbjct:  157 GVVGQIIPWNFPILMAAWKLAPALAAGNTAVLKPAEQTPASVLYLMSLIGDL-LPPGVVNVVNGFGAEAGKPLASSDRIAKVAFTGETTTGRLIMQYAS-HNLIPVTLELGGKSPNIFFADVLAAHDDFCDKALEGFTMFAL--NQGEVCTCPSRSLIQADIYDEFLELA 322          
The following BLAST results are available for this feature:
BLAST of FC869243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BETB_BURP84.537e-3845.09Betaine aldehyde dehydrogenase OS=Burkholderia phy... [more]
BETB_PSEAE5.926e-3847.53Betaine aldehyde dehydrogenase OS=Pseudomonas aeru... [more]
BETB_PSEA85.926e-3847.53Betaine aldehyde dehydrogenase OS=Pseudomonas aeru... [more]
BETB_PSEA75.926e-3847.53Betaine aldehyde dehydrogenase OS=Pseudomonas aeru... [more]
BADH_GADCA5.926e-3847.53Betaine aldehyde dehydrogenase OS=Gadus callarias ... [more]
BETB_PSEFS7.739e-3846.91Betaine aldehyde dehydrogenase OS=Pseudomonas fluo... [more]
AMNC_PSESP7.739e-3846.882-aminomuconic 6-semialdehyde dehydrogenase OS=Pse... [more]
AL8A1_MOUSE7.739e-3845.68Aldehyde dehydrogenase family 8 member A1 OS=Mus m... [more]
FEAB_ECOLI1.011e-3752.50Phenylacetaldehyde dehydrogenase OS=Escherichia co... [more]
ALDH_MYCTU1.011e-3751.18Probable aldehyde dehydrogenase OS=Mycobacterium t... [more]

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Properties
Property NameValue
Genbank descriptionC31010B01EF AbioticL1 Citrus clementina cDNA clone C31010B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869243 ID=FC869243; Name=FC869243; organism=Citrus clementina; type=EST; length=596bp
GGCGTTGCTGGCCAGATAGTTCCCTGGAACTTTCCTCTTCTCTTGTTTAC
TTGGAAAGTAGCGCCTGCACTAACTTGTGGCAATACTATTGTTCTAAAGT
CTGCTGAGCAAACGCCTTTGACTGCTCTGTATGTGGCAAAGCTATTCCAT
GAGGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCC
AACAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTT
TTACAGGACACTGTGATACTGGTAAGATTGTTCAGGAACTGGCTGCAAAA
AGCAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTAT
AATATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTG
CTTTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTAT
GTACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAGGCACGTGCA
ATGAGGCGTATTGTTGGCGATCCCTTCAGAGTGGTGTTGAACAAGGTCCT
CAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAAGTACATAAGGT
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