FC869243

Overview
NameFC869243
Unique NameFC869243
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length596
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ALDH_MYCBO (Probable aldehyde dehydrogenase OS=Mycobacterium bovis GN=Mb0467 PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.011e-37
Identity = 87/170 (51.18%), Postives = 112/170 (65.88%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDA------DVDQAVE-LAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 489
            GV GQI+PWNFP+L+  WK+APAL  GNT VLK AEQTP + LY+  L  +  LPPGV+NVV+G+G  AG  LAS   + K++FTG   TG+++ + A+  NL PVTLELGGKSP I F D         D+A+E    FAL  NQG+ C   SR+ +   +YDEF+E A
Sbjct:  157 GVVGQIIPWNFPILMAAWKLAPALAAGNTAVLKPAEQTPASVLYLMSLIGDL-LPPGVVNVVNGFGAEAGKPLASSDRIAKVAFTGETTTGRLIMQYAS-HNLIPVTLELGGKSPNIFFADVLAAHDDFCDKALEGFTMFAL--NQGEVCTCPSRSLIQADIYDEFLELA 322          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_ACIBT (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=betB PE=3 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 1.320e-37
Identity = 80/173 (46.24%), Postives = 112/173 (64.74%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEF----VEKARHVQ*G 507
            GV   I  WN+P+ +  WK APAL  GN ++ K +E TPLTAL +A+++ EAGLP GV NVV G G   G  L  H  ++K+SFTG  +TGK V   AA S LK VT+ELGGKSP II +DAD+++A ++A  A F++ GQ C  G+R +V + +  +F    VE+ + ++ G
Sbjct:  144 GVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSETTPLTALKLAEIYTEAGLPDGVFNVVQGAGREIGQWLTEHPVIEKISFTGGVETGKKVMASAAGSTLKEVTMELGGKSPLIICEDADLNRAADIAVMANFFSSGQVCTNGTRVFVPKSLLVDFEKAVVERVKRIRIG 316          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_ACIAD (Betaine aldehyde dehydrogenase OS=Acinetobacter sp. (strain ADP1) GN=betB PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.320e-37
Identity = 79/173 (45.66%), Postives = 111/173 (64.16%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEF----VEKARHVQ*G 507
            GV   I  WN+P+ +  WK APAL  GN ++ K +E TPLTA  +A+++ EAGLP GV NVV G G   G  L  H  ++K+SFTG  +TGK V   AA S LK VT+ELGGKSP II +DA++D+A ++A  A F++ GQ C  G+R ++ +R+   F    VE+ + ++ G
Sbjct:  144 GVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTAFKLAEIYSEAGLPAGVFNVVQGAGREIGQWLTEHAVIEKISFTGGVETGKKVMASAAGSTLKEVTMELGGKSPLIICEDANLDRAADIAVMANFFSSGQVCTNGTRVFIPQRLKAAFEQAVVERVKRIRMG 316          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_PSEAB (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=betB PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.724e-37
Identity = 76/162 (46.91%), Postives = 104/162 (64.20%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV   I  WN+P+ +  WK APAL  GN ++ K +E TPLT L +A+++ EAG+P GV NV++G G   G  L  H  ++K+SFTG   TGK V   A+ S+LK VT+ELGGKSP IIF DAD+D+A ++A  A F++ GQ C  G+R ++H      F  K
Sbjct:  144 GVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTTLKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAK 305          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_KLEP3 (Betaine aldehyde dehydrogenase OS=Klebsiella pneumoniae (strain 342) GN=betB PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.724e-37
Identity = 79/162 (48.77%), Postives = 103/162 (63.58%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV   I  WN+P+ +  WK APAL  GN ++ K +E TPLTAL +A+++ EAGLP GV NV+ G G   G  L  H  + K+SFTG   +GK V   +A S+LK VT+ELGGKSP II DDAD+D A ++A  A FY+ GQ C  G+R +V  +   EF  K
Sbjct:  144 GVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGIGAETGQYLTEHPGIAKISFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIIADDADLDLAADIAMMANFYSSGQVCTNGTRVFVPAKQKAEFEHK 305          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_STRMK (Betaine aldehyde dehydrogenase OS=Stenotrophomonas maltophilia (strain K279a) GN=betB PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.252e-37
Identity = 80/173 (46.24%), Postives = 110/173 (63.58%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEF----VEKARHVQ*G 507
            GV   I  WN+P+ +  WK APAL  GN +V K +E TPLTA+ +A+++ EAG+P GV NVV G G   G  L  H  ++K+SFTG   TGK V   AA S+LK VT+ELGGKSP +I DDAD+D+A ++A  A F++ GQ C  G+R +V   +   F    VE+ + ++ G
Sbjct:  144 GVVAGIGAWNYPIQIAMWKSAPALAAGNAMVFKPSEVTPLTAIRLAEIYTEAGVPAGVFNVVQGPGREIGQWLTEHPVIEKISFTGGVATGKKVMASAASSSLKEVTMELGGKSPLVICDDADLDRAADIAVMANFFSSGQVCTNGTRVFVPRSMLAAFEAAVVERVKRIRIG 316          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_STRM5 (Betaine aldehyde dehydrogenase OS=Stenotrophomonas maltophilia (strain R551-3) GN=betB PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.252e-37
Identity = 80/173 (46.24%), Postives = 110/173 (63.58%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEF----VEKARHVQ*G 507
            GV   I  WN+P+ +  WK APAL  GN +V K +E TPLTA+ +A+++ EAG+P GV NVV G G   G  L  H  ++K+SFTG   TGK V   AA S+LK VT+ELGGKSP +I DDAD+D+A ++A  A F++ GQ C  G+R +V   +   F    VE+ + ++ G
Sbjct:  144 GVVAGIGAWNYPIQIAMWKSAPALAAGNAMVFKPSEVTPLTAIRLAEIYTEAGVPAGVFNVVQGPGREIGQWLTEHPVIEKISFTGGVATGKKVMASAASSSLKEVTMELGGKSPLVICDDADLDRAADIAVMANFFSSGQVCTNGTRVFVPRSMLAAFEAAVVERVKRIRIG 316          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_PSEMY (Betaine aldehyde dehydrogenase OS=Pseudomonas mendocina (strain ymp) GN=betB PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.252e-37
Identity = 77/162 (47.53%), Postives = 105/162 (64.81%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV   I  WN+P+ +  WK APAL  GN ++ K +E T LTAL +A+++ EAGLP GV NV++G G   G  L  H  ++K+SFTG   TGK V   A+ S+LK VT+ELGGKSP I+F+DAD+D+A ++A  A FY+ GQ C  G+R +V   +   F  K
Sbjct:  144 GVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTSLTALKLAEIYTEAGLPAGVFNVLTGSGREVGQWLTEHPGIEKVSFTGGTVTGKKVMASASSSSLKEVTMELGGKSPLIVFEDADLDRAADIAVMANFYSSGQVCTNGTRVFVPRMLQARFEAK 305          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_ECOSM (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=betB PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.252e-37
Identity = 77/162 (47.53%), Postives = 104/162 (64.20%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV   I  WN+P+ +  WK APAL  GN ++ K +E TPLTAL +A+++ EAGLP GV NV+ G G   G  L  H  + K+SFTG   +GK V   +A S+LK VT+ELGGKSP I+FDDAD+D A ++A  A F++ GQ C  G+R +V  +    F +K
Sbjct:  144 GVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANFFSSGQVCTNGTRVFVPAKCKAAFEQK 305          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_ECOSE (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain SE11) GN=betB PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.252e-37
Identity = 77/162 (47.53%), Postives = 104/162 (64.20%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV   I  WN+P+ +  WK APAL  GN ++ K +E TPLTAL +A+++ EAGLP GV NV+ G G   G  L  H  + K+SFTG   +GK V   +A S+LK VT+ELGGKSP I+FDDAD+D A ++A  A F++ GQ C  G+R +V  +    F +K
Sbjct:  144 GVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANFFSSGQVCTNGTRVFVPAKCKAAFEQK 305          
The following BLAST results are available for this feature:
BLAST of FC869243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ALDH_MYCBO1.011e-3751.18Probable aldehyde dehydrogenase OS=Mycobacterium b... [more]
BETB_ACIBT1.320e-3746.24Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIAD1.320e-3745.66Betaine aldehyde dehydrogenase OS=Acinetobacter sp... [more]
BETB_PSEAB1.724e-3746.91Betaine aldehyde dehydrogenase OS=Pseudomonas aeru... [more]
BETB_KLEP31.724e-3748.77Betaine aldehyde dehydrogenase OS=Klebsiella pneum... [more]
BETB_STRMK2.252e-3746.24Betaine aldehyde dehydrogenase OS=Stenotrophomonas... [more]
BETB_STRM52.252e-3746.24Betaine aldehyde dehydrogenase OS=Stenotrophomonas... [more]
BETB_PSEMY2.252e-3747.53Betaine aldehyde dehydrogenase OS=Pseudomonas mend... [more]
BETB_ECOSM2.252e-3747.53Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECOSE2.252e-3747.53Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]

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Properties
Property NameValue
Genbank descriptionC31010B01EF AbioticL1 Citrus clementina cDNA clone C31010B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869243 ID=FC869243; Name=FC869243; organism=Citrus clementina; type=EST; length=596bp
GGCGTTGCTGGCCAGATAGTTCCCTGGAACTTTCCTCTTCTCTTGTTTAC
TTGGAAAGTAGCGCCTGCACTAACTTGTGGCAATACTATTGTTCTAAAGT
CTGCTGAGCAAACGCCTTTGACTGCTCTGTATGTGGCAAAGCTATTCCAT
GAGGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCC
AACAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTT
TTACAGGACACTGTGATACTGGTAAGATTGTTCAGGAACTGGCTGCAAAA
AGCAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTAT
AATATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTG
CTTTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTAT
GTACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAGGCACGTGCA
ATGAGGCGTATTGTTGGCGATCCCTTCAGAGTGGTGTTGAACAAGGTCCT
CAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAAGTACATAAGGT
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