FC869243

Overview
NameFC869243
Unique NameFC869243
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length596
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_ECO24 (Betaine aldehyde dehydrogenase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=betB PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.252e-37
Identity = 77/162 (47.53%), Postives = 104/162 (64.20%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV   I  WN+P+ +  WK APAL  GN ++ K +E TPLTAL +A+++ EAGLP GV NV+ G G   G  L  H  + K+SFTG   +GK V   +A S+LK VT+ELGGKSP I+FDDAD+D A ++A  A F++ GQ C  G+R +V  +    F +K
Sbjct:  144 GVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANFFSSGQVCTNGTRVFVPAKCKAAFEQK 305          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: GABD_ECOLI (Succinate-semialdehyde dehydrogenase [NADP+] OS=Escherichia coli (strain K12) GN=gabD PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 2.941e-37
Identity = 83/162 (51.23%), Postives = 104/162 (64.20%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV   I PWNFP  + T K  PAL  G T+VLK A QTP +AL +A+L   AG+P GV NVV+G     G  L S+  V KLSFTG  + G+ + E  AK ++K V+LELGG +PFI+FDDAD+D+AVE A  + F N GQ C   +R YV + VYD F EK
Sbjct:  148 GVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAK-DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEK 308          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_ECOLC (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=betB PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 2.941e-37
Identity = 77/162 (47.53%), Postives = 104/162 (64.20%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV   I  WN+P+ +  WK APAL  GN ++ K +E TPLTAL +A+++ EAGLP GV NV+ G G   G  L  H  + K+SFTG   +GK V   +A S+LK VT+ELGGKSP I+FDDAD+D A ++A  A F++ GQ C  G+R +V  +    F +K
Sbjct:  144 GVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPNGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANFFSSGQVCTNGTRVFVPAKCKAAFEQK 305          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_ECO7I (Betaine aldehyde dehydrogenase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=betB PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 2.941e-37
Identity = 76/162 (46.91%), Postives = 104/162 (64.20%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV   I  WN+P+ +  WK APAL  GN ++ K +E TPLTAL +A+++ EAGLP GV NV+ G G   G  L  H  + K+SFTG   +GK V   +A S+LK VT+ELGGKSP I+FDDAD+D A ++A  A F++ GQ C  G+R ++  +    F +K
Sbjct:  144 GVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANFFSSGQVCTNGTRVFIPTKCKAAFEQK 305          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_ACIBY (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain AYE) GN=betB PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 2.941e-37
Identity = 80/173 (46.24%), Postives = 111/173 (64.16%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEF----VEKARHVQ*G 507
            GV   I  WN+P+ +  WK APAL  GN ++ K +E TPLTAL +A+++ EAGLP GV NVV G G   G  L  H  ++K+SFTG  +TGK V   AA S LK VT+ELGGKSP II +DAD+++A ++A  A F++ GQ C  G+R +V +    +F    VE+ + ++ G
Sbjct:  144 GVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSETTPLTALKLAEIYTEAGLPDGVFNVVQGAGREIGQWLTEHPVIEKISFTGGVETGKKVMASAAGSTLKEVTMELGGKSPLIICEDADLNRAADIAVMANFFSSGQVCTNGTRVFVPKSRLADFEKAVVERVKRIRVG 316          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_ACIBC (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain ACICU) GN=betB PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 2.941e-37
Identity = 80/173 (46.24%), Postives = 111/173 (64.16%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEF----VEKARHVQ*G 507
            GV   I  WN+P+ +  WK APAL  GN ++ K +E TPLTAL +A+++ EAGLP GV NVV G G   G  L  H  ++K+SFTG  +TGK V   AA S LK VT+ELGGKSP II +DAD+++A ++A  A F++ GQ C  G+R +V +    +F    VE+ + ++ G
Sbjct:  144 GVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSETTPLTALKLAEIYTEAGLPDGVFNVVQGAGREIGQWLTEHPVIEKISFTGGVETGKKVMASAAGSTLKEVTMELGGKSPLIICEDADLNRAADIAVMANFFSSGQVCTNGTRVFVPKSRLADFEKAVVERVKRIRIG 316          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_ACIB5 (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain AB0057) GN=betB PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 2.941e-37
Identity = 80/173 (46.24%), Postives = 111/173 (64.16%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEF----VEKARHVQ*G 507
            GV   I  WN+P+ +  WK APAL  GN ++ K +E TPLTAL +A+++ EAGLP GV NVV G G   G  L  H  ++K+SFTG  +TGK V   AA S LK VT+ELGGKSP II +DAD+++A ++A  A F++ GQ C  G+R +V +    +F    VE+ + ++ G
Sbjct:  144 GVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSETTPLTALKLAEIYTEAGLPDGVFNVVQGAGREIGQWLTEHPVIEKISFTGGVETGKKVMASAAGSTLKEVTMELGGKSPLIICEDADLNRAADIAVMANFFSSGQVCTNGTRVFVPKSRLADFEKAVVERVKRIRVG 316          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_ACIB3 (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain AB307-0294) GN=betB PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 2.941e-37
Identity = 80/173 (46.24%), Postives = 111/173 (64.16%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEF----VEKARHVQ*G 507
            GV   I  WN+P+ +  WK APAL  GN ++ K +E TPLTAL +A+++ EAGLP GV NVV G G   G  L  H  ++K+SFTG  +TGK V   AA S LK VT+ELGGKSP II +DAD+++A ++A  A F++ GQ C  G+R +V +    +F    VE+ + ++ G
Sbjct:  144 GVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSETTPLTALKLAEIYTEAGLPDGVFNVVQGAGREIGQWLTEHPVIEKISFTGGVETGKKVMASAAGSTLKEVTMELGGKSPLIICEDADLNRAADIAVMANFFSSGQVCTNGTRVFVPKSRLADFEKAVVERVKRIRVG 316          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ALDH_STRCO (Probable aldehyde dehydrogenase OS=Streptomyces coelicolor GN=SCO1174 PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 2.941e-37
Identity = 86/168 (51.19%), Postives = 109/168 (64.88%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDA----DVDQAVELAHFALF-YNQGQCCCAGSRTYVHERVYDEFVEKA 489
            GV  QI+PWNFP+L+ TWK+APAL  GN +VLK AEQTP +  Y   L  +  LPPGVLNVV+G+G  AG  LAS   V K++FTG   TG+++ + A++ N+KPVTLELGGKSP I F+D     D  +   L  F +F  NQG+ C   SR  V   VY EF+E A
Sbjct:  157 GVVAQIIPWNFPILMATWKLAPALAAGNAVVLKPAEQTPASIHYWLSLVADL-LPPGVLNVVNGFGVEAGKPLASSPRVAKVAFTGETTTGRLIMQYASE-NIKPVTLELGGKSPNIFFEDVWARDDDFRDKALEGFTMFALNQGEVCTCPSRALVQRGVYAEFMEAA 322          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: THCA_RHOER (EPTC-inducible aldehyde dehydrogenase OS=Rhodococcus erythropolis GN=thcA PE=1 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 3.841e-37
Identity = 82/168 (48.81%), Postives = 111/168 (66.07%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDA----DVDQAVELAHFALF-YNQGQCCCAGSRTYVHERVYDEFVEKA 489
            GV GQI+PWNFP+L+  WK+APAL  GN IVLK AEQTP++ L++  +  +  LP GVLN+V+G+G  AG  LAS   + K++FTG   TG+++ + A++ NL PVTLELGGKSP + F D     D  Q   L  F +F  NQG+ C A SR  + E ++DEF+  A
Sbjct:  157 GVVGQIIPWNFPILMAVWKLAPALAAGNAIVLKPAEQTPVSILHLIGIIGDL-LPAGVLNIVNGFGVEAGKPLASSPRIKKIAFTGETTTGRLIMQYASQ-NLIPVTLELGGKSPNVFFSDVLASNDDYQDKALEGFTMFALNQGEVCTAPSRALIQEDIFDEFLAMA 322          
The following BLAST results are available for this feature:
BLAST of FC869243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BETB_ECO242.252e-3747.53Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
GABD_ECOLI2.941e-3751.23Succinate-semialdehyde dehydrogenase [NADP+] OS=Es... [more]
BETB_ECOLC2.941e-3747.53Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECO7I2.941e-3746.91Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ACIBY2.941e-3746.24Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIBC2.941e-3746.24Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIB52.941e-3746.24Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIB32.941e-3746.24Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
ALDH_STRCO2.941e-3751.19Probable aldehyde dehydrogenase OS=Streptomyces co... [more]
THCA_RHOER3.841e-3748.81EPTC-inducible aldehyde dehydrogenase OS=Rhodococc... [more]

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Properties
Property NameValue
Genbank descriptionC31010B01EF AbioticL1 Citrus clementina cDNA clone C31010B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869243 ID=FC869243; Name=FC869243; organism=Citrus clementina; type=EST; length=596bp
GGCGTTGCTGGCCAGATAGTTCCCTGGAACTTTCCTCTTCTCTTGTTTAC
TTGGAAAGTAGCGCCTGCACTAACTTGTGGCAATACTATTGTTCTAAAGT
CTGCTGAGCAAACGCCTTTGACTGCTCTGTATGTGGCAAAGCTATTCCAT
GAGGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCC
AACAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTT
TTACAGGACACTGTGATACTGGTAAGATTGTTCAGGAACTGGCTGCAAAA
AGCAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTAT
AATATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTG
CTTTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTAT
GTACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAGGCACGTGCA
ATGAGGCGTATTGTTGGCGATCCCTTCAGAGTGGTGTTGAACAAGGTCCT
CAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAAGTACATAAGGT
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