FC869243

Overview
NameFC869243
Unique NameFC869243
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length596
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_ECO45 (Betaine aldehyde dehydrogenase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=betB PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 6.552e-37
Identity = 76/162 (46.91%), Postives = 103/162 (63.58%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV   I  WN+P+ +  WK APAL  GN ++ K +E TPLTAL +A+++ EAGLP GV NV+ G G   G  L  H  + K+SFTG   +GK V   +A S+LK VT+ELGGKSP I+FDDAD+D A ++   A F++ GQ C  G+R +V  +    F +K
Sbjct:  144 GVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTDHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADITMMANFFSSGQVCTNGTRVFVPTKCKAAFEQK 305          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ABDH_PECCP (Gamma-aminobutyraldehyde dehydrogenase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=PC1_1415 PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 6.552e-37
Identity = 81/161 (50.31%), Postives = 101/161 (62.73%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVE 483
            GV   I PWN+PL++ +WK+APAL  GN +VLK AEQTPLT  Y+A L  E  LP GV+N+V G G   G AL  H  V+ +S TG   TG  +    A S++K   +ELGGK+P I+FDDAD+DQ V+      FYN GQ C A  R YV   VYD+ VE
Sbjct:  140 GVVASIAPWNYPLMMASWKLAPALAAGNCVVLKPAEQTPLTTFYLAHLLAEI-LPAGVVNIVFGRGADIGDALTGHEKVNMVSLTGSIATGAHILSHTA-SSVKRTHMELGGKAPVIVFDDADIDQVVDGIRSFGFYNAGQDCTAACRLYVQRAVYDKVVE 298          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_PSEPF (Betaine aldehyde dehydrogenase OS=Pseudomonas fluorescens (strain Pf0-1) GN=betB PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 8.557e-37
Identity = 77/162 (47.53%), Postives = 103/162 (63.58%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV   I  WN+P+ +  WK APAL  GN ++ K +E T LT L +A+++ EAG+P GV NV++G G   G  L  H  ++K+SFTG  DTGK V   A+ S+LK VT+ELGGKSP II DDAD+D+A + A  A FY+ GQ C  G+R +V   +   F  K
Sbjct:  144 GVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTSLTTLKLAEIYTEAGVPNGVFNVLTGSGREVGTWLTEHPRIEKISFTGGTDTGKKVMASASASSLKDVTMELGGKSPLIICDDADLDRAADTAMMANFYSSGQVCTNGTRVFVPSHLKAAFEAK 305          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: AL9A1_MOUSE (4-trimethylaminobutyraldehyde dehydrogenase OS=Mus musculus GN=Aldh9a1 PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.118e-36
Identity = 75/162 (46.30%), Postives = 106/162 (65.43%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV   I  WN+P  +  WK APAL CGN ++ K +  TP++AL +A+++ +AG PPG+ NVV G G   G  L  H +V K+SFTG   TG  + E++AK  +KP+TLELGGKSP IIF D +++ AV+ A  A F  QGQ CC G+R +V + + D+F+ +
Sbjct:  148 GVCVGIGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPVSALLLAEIYTKAGAPPGLFNVVQG-GAATGQFLCHHREVAKISFTGSVPTGVKIMEMSAK-GVKPITLELGGKSPLIIFSDCNMENAVKGALMANFLTQGQVCCNGTRVFVQKEIADKFINE 307          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ABDH_ERWCT (Gamma-aminobutyraldehyde dehydrogenase OS=Erwinia carotovora subsp. atroseptica GN=ECA1542 PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.118e-36
Identity = 81/161 (50.31%), Postives = 100/161 (62.11%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVE 483
            GV   I PWN+PL++ +WK+APAL  GN +VLK AEQTPLT  Y+A L  +  LP GV+N+V G G   G AL  H  V+ +S TG   TG  +    A S +K   +ELGGK+P I+FDDAD+DQ V+      FYN GQ C A  R YV   VYDE VE
Sbjct:  140 GVVASIAPWNYPLMMASWKLAPALAAGNCVVLKPAEQTPLTTFYLAHLLADI-LPAGVVNIVFGRGADIGDALTGHEKVNMVSLTGSIATGAHILAHTAAS-VKRTHMELGGKAPVIVFDDADIDQVVDGIRSFGFYNAGQDCTAACRLYVQRAVYDEVVE 298          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: A9A1A_DANRE (Aldehyde dehydrogenase family 9 member A1-A OS=Danio rerio GN=aldh9a1a PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.118e-36
Identity = 78/162 (48.15%), Postives = 106/162 (65.43%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV   I  WN+P  +  WK APAL CGN +V K +  TP+TA+ +A+++ EAG+P G+ NVV G G   G+ L  H  V K+SFTG   TGK V E+AAKS +K VTLELGGKSP IIF D +++ A++ A  A F  QG+ CC G+R +V   +  +F+E+
Sbjct:  162 GVCVGIGAWNYPFQIAAWKSAPALACGNAMVFKPSPMTPVTAVMLAEIYKEAGVPDGLFNVVQG-GAETGSLLCHHPMVAKVSFTGSVPTGKKVMEMAAKS-VKQVTLELGGKSPLIIFKDCELENAIKGALMANFLTQGEVCCNGTRVFVQREIMPKFLEE 321          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_YERPY (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=betB PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.460e-36
Identity = 77/162 (47.53%), Postives = 103/162 (63.58%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV   I  WN+P+ +  WK APAL  GN ++ K +E T LTAL +A+++ EAGLP GV NV++G G   G  L  H  + K+SFTG   +GK V   AA S LK VT+ELGGKSP IIF D D+D+A ++A  A FY+ GQ C  G+R +V + +   F +K
Sbjct:  144 GVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTSLTALKLAEIYTEAGLPAGVFNVLTGSGDQVGQMLTEHPGIAKVSFTGGIASGKKVMANAAGSTLKDVTMELGGKSPLIIFADVDLDKAADIAMMANFYSSGQVCTNGTRVFVPQALQAAFEQK 305          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_RHILO (Betaine aldehyde dehydrogenase OS=Rhizobium loti GN=betB PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.460e-36
Identity = 79/162 (48.77%), Postives = 104/162 (64.20%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV   I  WN+P+ +  WK APAL  GN +V K +E TPL+AL +A+++ EAGLP G+ NVV GYG   GA L  H  V K+S TG   TG+ V  LA  S +K  T+ELGGKSP I+FDDAD++ A+  A    FY+ GQ C  G+R +V   ++D FVE+
Sbjct:  143 GVCVGIGAWNYPIQIAGWKSAPALAMGNAMVFKPSENTPLSALALAEIYSEAGLPDGLFNVVQGYG-DVGAGLVGHDVVAKVSVTGSVPTGRKVLSLAG-SKMKHATMELGGKSPLIVFDDADIENAIGGAMLGNFYSTGQICSNGTRVFVQSGIHDRFVER 302          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: SSDH_ARATH (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Arabidopsis thaliana GN=ALDH5F1 PE=1 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 1.906e-36
Identity = 81/161 (50.31%), Postives = 103/161 (63.98%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVE 483
            GV G I PWNFPL + T KV PAL  G T+V+K +E TPLTAL  A+L  +AG+PPG LNVV G  P  G AL +   V K++FTG    GK +   AA + +K V+LELGG +P I+FDDAD+D AV+    A F N GQ C   +R  V + +YD+F E
Sbjct:  190 GVVGAITPWNFPLAMITRKVGPALASGCTVVVKPSELTPLTALAAAELALQAGVPPGALNVVMGNAPEIGDALLTSPQVRKITFTGSTAVGKKLMAAAAPT-VKKVSLELGGNAPSIVFDDADLDVAVKGTLAAKFRNSGQTCVCANRVLVQDGIYDKFAE 349          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_PSEE4 (Betaine aldehyde dehydrogenase OS=Pseudomonas entomophila (strain L48) GN=betB PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.906e-36
Identity = 76/151 (50.33%), Postives = 100/151 (66.23%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYV 453
            GV   I  WN+P+ +  WK APAL  GN ++ K +E T LT L +A++F EAGLP GV NV++G G   G  L  H  ++K+SFTG   TGK V   A+ S+LK VT+ELGGKSP II DDAD+D+A ++A  A FY+ GQ C  G+R +V
Sbjct:  144 GVTVGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTSLTTLKLAEIFTEAGLPNGVFNVLTGSGREVGTWLTEHPRIEKVSFTGGTTTGKKVMASASSSSLKEVTMELGGKSPLIICDDADLDKAADIAMMANFYSSGQVCTNGTRVFV 294          
The following BLAST results are available for this feature:
BLAST of FC869243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BETB_ECO456.552e-3746.91Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
ABDH_PECCP6.552e-3750.31Gamma-aminobutyraldehyde dehydrogenase OS=Pectobac... [more]
BETB_PSEPF8.557e-3747.53Betaine aldehyde dehydrogenase OS=Pseudomonas fluo... [more]
AL9A1_MOUSE1.118e-3646.304-trimethylaminobutyraldehyde dehydrogenase OS=Mus... [more]
ABDH_ERWCT1.118e-3650.31Gamma-aminobutyraldehyde dehydrogenase OS=Erwinia ... [more]
A9A1A_DANRE1.118e-3648.15Aldehyde dehydrogenase family 9 member A1-A OS=Dan... [more]
BETB_YERPY1.460e-3647.53Betaine aldehyde dehydrogenase OS=Yersinia pseudot... [more]
BETB_RHILO1.460e-3648.77Betaine aldehyde dehydrogenase OS=Rhizobium loti G... [more]
SSDH_ARATH1.906e-3650.31Succinate-semialdehyde dehydrogenase, mitochondria... [more]
BETB_PSEE41.906e-3650.33Betaine aldehyde dehydrogenase OS=Pseudomonas ento... [more]

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Properties
Property NameValue
Genbank descriptionC31010B01EF AbioticL1 Citrus clementina cDNA clone C31010B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869243 ID=FC869243; Name=FC869243; organism=Citrus clementina; type=EST; length=596bp
GGCGTTGCTGGCCAGATAGTTCCCTGGAACTTTCCTCTTCTCTTGTTTAC
TTGGAAAGTAGCGCCTGCACTAACTTGTGGCAATACTATTGTTCTAAAGT
CTGCTGAGCAAACGCCTTTGACTGCTCTGTATGTGGCAAAGCTATTCCAT
GAGGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCC
AACAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTT
TTACAGGACACTGTGATACTGGTAAGATTGTTCAGGAACTGGCTGCAAAA
AGCAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTAT
AATATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTG
CTTTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTAT
GTACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAGGCACGTGCA
ATGAGGCGTATTGTTGGCGATCCCTTCAGAGTGGTGTTGAACAAGGTCCT
CAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAAGTACATAAGGT
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