FC869243

Overview
NameFC869243
Unique NameFC869243
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length596
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_OCHA4 (Betaine aldehyde dehydrogenase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=betB PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 2.125e-36
Identity = 76/162 (46.91%), Postives = 105/162 (64.81%), Query Frame = 1 
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            G+   I  WN+P+ +  WK APAL  GN  + K +E TPL+AL +A+ + EAGLP G+ NVV G+G   GAAL +H    K+S TG   TGK +   A + +LK VT+ELGGKSP I+FDDAD++ A+  A    FY+ GQ C  G+R +VH+ + + FVE+
Sbjct:  143 GICVGIGAWNYPIQIAAWKSAPALAMGNAFIFKPSENTPLSALALAEAYKEAGLPDGLFNVVQGFG-DVGAALVNHRLTAKVSLTGSVPTGKRIMAQAGE-HLKHVTMELGGKSPIIVFDDADIESAIGGAMLGNFYSTGQVCSNGTRVFVHKNLRERFVER 302

HSP 2 Score: 22.3274 bits (46), Expect = 2.125e-36
Identity = 9/23 (39.13%), Postives = 13/23 (56.52%), Query Frame = 2 
Query:  524 LQSGVEQGPQIDPEQFEKVLKYI 592
            L    + GP ++  Q +KVL YI
Sbjct:  316 LDEATQMGPLVNRAQRDKVLSYI 338
[Close]
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_YERPS (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis GN=betB PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 2.490e-36
Identity = 79/162 (48.77%), Postives = 102/162 (62.96%), Query Frame = 1 
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV   I  WN+PL +  WK APAL  GN ++ K +E T LTAL +A ++ EAGLP GV NV++G G   G  L  H  + K+SFTG   +GK V   AA S LK VT+ELGGKSP IIF DAD+D+A ++A  A FY+ GQ C  G+R +V   +   F +K
Sbjct:  144 GVVAGIGAWNYPLQIALWKSAPALAAGNAMIFKPSEVTSLTALKLAGIYTEAGLPAGVFNVLTGSGDQVGQMLTEHPGIAKVSFTGGIASGKKVMANAAGSTLKDVTMELGGKSPLIIFADADLDKAADIAMMANFYSSGQVCTNGTRVFVPLALQAAFEQK 305
[Close]
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: AL8A1_BOVIN (Aldehyde dehydrogenase family 8 member A1 OS=Bos taurus GN=ALDH8A1 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 2.490e-36
Identity = 71/162 (43.83%), Postives = 107/162 (66.05%), Query Frame = 1 
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            G+A  I PWN PL L TWK+APA+  GNT++ K +E T +TA  + +L  +AG+PPGV+N+V G GP  G AL SH +V  +SFTG   T + + +L+A  + K ++LELGGK+P +IF+DA++ + +     + F NQG+ C   SR +V   +Y EF+++
Sbjct:  146 GIAALISPWNLPLYLLTWKIAPAIAAGNTVIAKPSELTSVTAWMMCRLLEKAGVPPGVVNIVFGTGPRVGEALVSHPEVPLISFTGSQPTAERIMQLSA-PHCKKLSLELGGKNPAVIFEDANLAECIPTTVRSSFANQGEICLCTSRIFVQRSIYSEFLKR 306
[Close]
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_BRUSU (Betaine aldehyde dehydrogenase OS=Brucella suis GN=betB PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.606e-36
Identity = 75/162 (46.30%), Postives = 104/162 (64.20%), Query Frame = 1 
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            G+   I  WN+P+ +  WK APAL  GN  + K +E TPL+AL +A+ + EAGLP G+ NVV GYG   GAAL +H    K+S TG   TG+ +   A +  LK VT+ELGGKSP I+FDDAD++ A+  A    FY+ GQ C  G+R +VH+ + + F+E+
Sbjct:  143 GICVGIGAWNYPIQIAAWKSAPALAMGNAFIFKPSENTPLSALALAEAYKEAGLPDGLFNVVQGYG-DVGAALVNHRLTAKVSLTGSVPTGRRIMAQAGE-QLKHVTMELGGKSPLIVFDDADLESAIGGAMLGNFYSTGQVCSNGTRVFVHKNIRERFIER 302

HSP 2 Score: 21.9422 bits (45), Expect = 3.606e-36
Identity = 9/19 (47.37%), Postives = 12/19 (63.16%), Query Frame = 2 
Query:  539 EQGPQIDPEQFEKVLKYIR 595
            + GP I   Q +KVL YI+
Sbjct:  321 QMGPLISAAQRDKVLSYIK 339
[Close]
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_BRUSI (Betaine aldehyde dehydrogenase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=betB PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.606e-36
Identity = 75/162 (46.30%), Postives = 104/162 (64.20%), Query Frame = 1 
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            G+   I  WN+P+ +  WK APAL  GN  + K +E TPL+AL +A+ + EAGLP G+ NVV GYG   GAAL +H    K+S TG   TG+ +   A +  LK VT+ELGGKSP I+FDDAD++ A+  A    FY+ GQ C  G+R +VH+ + + F+E+
Sbjct:  143 GICVGIGAWNYPIQIAAWKSAPALAMGNAFIFKPSENTPLSALALAEAYKEAGLPDGLFNVVQGYG-DVGAALVNHRLTAKVSLTGSVPTGRRIMAQAGE-QLKHVTMELGGKSPLIVFDDADLESAIGGAMLGNFYSTGQVCSNGTRVFVHKNIRERFIER 302

HSP 2 Score: 21.9422 bits (45), Expect = 3.606e-36
Identity = 9/19 (47.37%), Postives = 12/19 (63.16%), Query Frame = 2 
Query:  539 EQGPQIDPEQFEKVLKYIR 595
            + GP I   Q +KVL YI+
Sbjct:  321 QMGPLISAAQRDKVLSYIK 339
[Close]
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_BRUO2 (Betaine aldehyde dehydrogenase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=betB PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.606e-36
Identity = 75/162 (46.30%), Postives = 104/162 (64.20%), Query Frame = 1 
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            G+   I  WN+P+ +  WK APAL  GN  + K +E TPL+AL +A+ + EAGLP G+ NVV GYG   GAAL +H    K+S TG   TG+ +   A +  LK VT+ELGGKSP I+FDDAD++ A+  A    FY+ GQ C  G+R +VH+ + + F+E+
Sbjct:  143 GICVGIGAWNYPIQIAAWKSAPALAMGNAFIFKPSENTPLSALALAEAYKEAGLPDGLFNVVQGYG-DVGAALVNHRLTAKVSLTGSVPTGRRIMAQAGE-QLKHVTMELGGKSPLIVFDDADLESAIGGAMLGNFYSTGQVCSNGTRVFVHKNIRERFIER 302

HSP 2 Score: 21.9422 bits (45), Expect = 3.606e-36
Identity = 9/19 (47.37%), Postives = 12/19 (63.16%), Query Frame = 2 
Query:  539 EQGPQIDPEQFEKVLKYIR 595
            + GP I   Q +KVL YI+
Sbjct:  321 QMGPLISAAQRDKVLSYIK 339
[Close]
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_BRUME (Betaine aldehyde dehydrogenase OS=Brucella melitensis GN=betB PE=3 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 3.606e-36
Identity = 75/162 (46.30%), Postives = 104/162 (64.20%), Query Frame = 1 
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            G+   I  WN+P+ +  WK APAL  GN  + K +E TPL+AL +A+ + EAGLP G+ NVV GYG   GAAL +H    K+S TG   TG+ +   A +  LK VT+ELGGKSP I+FDDAD++ A+  A    FY+ GQ C  G+R +VH+ + + F+E+
Sbjct:  143 GICVGIGAWNYPIQIAAWKSAPALAMGNAFIFKPSENTPLSALALAEAYKEAGLPDGLFNVVQGYG-DVGAALVNHRLTAKVSLTGSVPTGRRIMAQAGE-QLKHVTMELGGKSPLIVFDDADLESAIGGAMLGNFYSTGQVCSNGTRVFVHKNIRERFIER 302

HSP 2 Score: 21.9422 bits (45), Expect = 3.606e-36
Identity = 9/19 (47.37%), Postives = 12/19 (63.16%), Query Frame = 2 
Query:  539 EQGPQIDPEQFEKVLKYIR 595
            + GP I   Q +KVL YI+
Sbjct:  321 QMGPLISAAQRDKVLSYIK 339
[Close]
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_BRUMB (Betaine aldehyde dehydrogenase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=betB PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.606e-36
Identity = 75/162 (46.30%), Postives = 104/162 (64.20%), Query Frame = 1 
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            G+   I  WN+P+ +  WK APAL  GN  + K +E TPL+AL +A+ + EAGLP G+ NVV GYG   GAAL +H    K+S TG   TG+ +   A +  LK VT+ELGGKSP I+FDDAD++ A+  A    FY+ GQ C  G+R +VH+ + + F+E+
Sbjct:  143 GICVGIGAWNYPIQIAAWKSAPALAMGNAFIFKPSENTPLSALALAEAYKEAGLPDGLFNVVQGYG-DVGAALVNHRLTAKVSLTGSVPTGRRIMAQAGE-QLKHVTMELGGKSPLIVFDDADLESAIGGAMLGNFYSTGQVCSNGTRVFVHKNIRERFIER 302

HSP 2 Score: 21.9422 bits (45), Expect = 3.606e-36
Identity = 9/19 (47.37%), Postives = 12/19 (63.16%), Query Frame = 2 
Query:  539 EQGPQIDPEQFEKVLKYIR 595
            + GP I   Q +KVL YI+
Sbjct:  321 QMGPLISAAQRDKVLSYIK 339
[Close]
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_BRUC2 (Betaine aldehyde dehydrogenase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=betB PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.606e-36
Identity = 75/162 (46.30%), Postives = 104/162 (64.20%), Query Frame = 1 
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            G+   I  WN+P+ +  WK APAL  GN  + K +E TPL+AL +A+ + EAGLP G+ NVV GYG   GAAL +H    K+S TG   TG+ +   A +  LK VT+ELGGKSP I+FDDAD++ A+  A    FY+ GQ C  G+R +VH+ + + F+E+
Sbjct:  143 GICVGIGAWNYPIQIAAWKSAPALAMGNAFIFKPSENTPLSALALAEAYKEAGLPDGLFNVVQGYG-DVGAALVNHRLTAKVSLTGSVPTGRRIMAQAGE-QLKHVTMELGGKSPLIVFDDADLESAIGGAMLGNFYSTGQVCSNGTRVFVHKNIRERFIER 302

HSP 2 Score: 21.9422 bits (45), Expect = 3.606e-36
Identity = 9/19 (47.37%), Postives = 12/19 (63.16%), Query Frame = 2 
Query:  539 EQGPQIDPEQFEKVLKYIR 595
            + GP I   Q +KVL YI+
Sbjct:  321 QMGPLISAAQRDKVLSYIK 339
[Close]
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_BRUAB (Betaine aldehyde dehydrogenase OS=Brucella abortus GN=betB PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.606e-36
Identity = 75/162 (46.30%), Postives = 104/162 (64.20%), Query Frame = 1 
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            G+   I  WN+P+ +  WK APAL  GN  + K +E TPL+AL +A+ + EAGLP G+ NVV GYG   GAAL +H    K+S TG   TG+ +   A +  LK VT+ELGGKSP I+FDDAD++ A+  A    FY+ GQ C  G+R +VH+ + + F+E+
Sbjct:  143 GICVGIGAWNYPIQIAAWKSAPALAMGNAFIFKPSENTPLSALALAEAYKEAGLPDGLFNVVQGYG-DVGAALVNHRLTAKVSLTGSVPTGRRIMAQAGE-QLKHVTMELGGKSPLIVFDDADLESAIGGAMLGNFYSTGQVCSNGTRVFVHKNIRERFIER 302

HSP 2 Score: 21.9422 bits (45), Expect = 3.606e-36
Identity = 9/19 (47.37%), Postives = 12/19 (63.16%), Query Frame = 2 
Query:  539 EQGPQIDPEQFEKVLKYIR 595
            + GP I   Q +KVL YI+
Sbjct:  321 QMGPLISAAQRDKVLSYIK 339
The following BLAST results are available for this feature:
BLAST of FC869243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BETB_OCHA42.125e-3646.91Betaine aldehyde dehydrogenase OS=Ochrobactrum ant... [more]
BETB_YERPS2.490e-3648.77Betaine aldehyde dehydrogenase OS=Yersinia pseudot... [more]
AL8A1_BOVIN2.490e-3643.83Aldehyde dehydrogenase family 8 member A1 OS=Bos t... [more]
BETB_BRUSU3.606e-3646.30Betaine aldehyde dehydrogenase OS=Brucella suis GN... [more]
BETB_BRUSI3.606e-3646.30Betaine aldehyde dehydrogenase OS=Brucella suis (s... [more]
BETB_BRUO23.606e-3646.30Betaine aldehyde dehydrogenase OS=Brucella ovis (s... [more]
BETB_BRUME3.606e-3646.30Betaine aldehyde dehydrogenase OS=Brucella meliten... [more]
BETB_BRUMB3.606e-3646.30Betaine aldehyde dehydrogenase OS=Brucella meliten... [more]
BETB_BRUC23.606e-3646.30Betaine aldehyde dehydrogenase OS=Brucella canis (... [more]
BETB_BRUAB3.606e-3646.30Betaine aldehyde dehydrogenase OS=Brucella abortus... [more]

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Properties
Property NameValue
Genbank descriptionC31010B01EF AbioticL1 Citrus clementina cDNA clone C31010B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869243 ID=FC869243; Name=FC869243; organism=Citrus clementina; type=EST; length=596bp
GGCGTTGCTGGCCAGATAGTTCCCTGGAACTTTCCTCTTCTCTTGTTTAC
TTGGAAAGTAGCGCCTGCACTAACTTGTGGCAATACTATTGTTCTAAAGT
CTGCTGAGCAAACGCCTTTGACTGCTCTGTATGTGGCAAAGCTATTCCAT
GAGGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCC
AACAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTT
TTACAGGACACTGTGATACTGGTAAGATTGTTCAGGAACTGGCTGCAAAA
AGCAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTAT
AATATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTG
CTTTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTAT
GTACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAGGCACGTGCA
ATGAGGCGTATTGTTGGCGATCCCTTCAGAGTGGTGTTGAACAAGGTCCT
CAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAAGTACATAAGGT
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