FC869243

Overview
NameFC869243
Unique NameFC869243
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length596
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_BRUA2 (Betaine aldehyde dehydrogenase OS=Brucella abortus (strain 2308) GN=betB PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.606e-36
Identity = 75/162 (46.30%), Postives = 104/162 (64.20%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            G+   I  WN+P+ +  WK APAL  GN  + K +E TPL+AL +A+ + EAGLP G+ NVV GYG   GAAL +H    K+S TG   TG+ +   A +  LK VT+ELGGKSP I+FDDAD++ A+  A    FY+ GQ C  G+R +VH+ + + F+E+
Sbjct:  143 GICVGIGAWNYPIQIAAWKSAPALAMGNAFIFKPSENTPLSALALAEAYKEAGLPDGLFNVVQGYG-DVGAALVNHRLTAKVSLTGSVPTGRRIMAQAGE-QLKHVTMELGGKSPLIVFDDADLESAIGGAMLGNFYSTGQVCSNGTRVFVHKNIRERFIER 302          

HSP 2 Score: 21.9422 bits (45), Expect = 3.606e-36
Identity = 9/19 (47.37%), Postives = 12/19 (63.16%), Query Frame = 2
Query:  539 EQGPQIDPEQFEKVLKYIR 595
            + GP I   Q +KVL YI+
Sbjct:  321 QMGPLISAAQRDKVLSYIK 339          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_BRUA1 (Betaine aldehyde dehydrogenase OS=Brucella abortus (strain S19) GN=betB PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.606e-36
Identity = 75/162 (46.30%), Postives = 104/162 (64.20%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            G+   I  WN+P+ +  WK APAL  GN  + K +E TPL+AL +A+ + EAGLP G+ NVV GYG   GAAL +H    K+S TG   TG+ +   A +  LK VT+ELGGKSP I+FDDAD++ A+  A    FY+ GQ C  G+R +VH+ + + F+E+
Sbjct:  143 GICVGIGAWNYPIQIAAWKSAPALAMGNAFIFKPSENTPLSALALAEAYKEAGLPDGLFNVVQGYG-DVGAALVNHRLTAKVSLTGSVPTGRRIMAQAGE-QLKHVTMELGGKSPLIVFDDADLESAIGGAMLGNFYSTGQVCSNGTRVFVHKNIRERFIER 302          

HSP 2 Score: 21.9422 bits (45), Expect = 3.606e-36
Identity = 9/19 (47.37%), Postives = 12/19 (63.16%), Query Frame = 2
Query:  539 EQGPQIDPEQFEKVLKYIR 595
            + GP I   Q +KVL YI+
Sbjct:  321 QMGPLISAAQRDKVLSYIK 339          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_RHILW (Betaine aldehyde dehydrogenase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=betB PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 5.546e-36
Identity = 82/175 (46.86%), Postives = 108/175 (61.71%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKARHVQ*GVLLAIP 525
            GV   I  WN+P  +  WK APAL  GN +V K +E TPL AL +A++ HEAGLP G+ NV+ G   T G  L +H DV K+S TG   TG+ V   AA  NLK VT+ELGGKSP I+FDDAD+D AV  A    FY+ GQ C  G+R +V + +  EF+++ +     +L+  P
Sbjct:  144 GVCVGIGAWNYPQQIACWKAAPALISGNAMVFKPSENTPLGALKIAEILHEAGLPKGLFNVIQGDRDT-GPLLVNHPDVAKVSLTGSVPTGRRV-AAAAAGNLKHVTMELGGKSPLIVFDDADLDSAVGGAMLGNFYSTGQVCSNGTRVFVQKGIKTEFLKRLKARTEAMLIGDP 316          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: AL9A1_RAT (4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus GN=Aldh9a1 PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 9.460e-36
Identity = 76/162 (46.91%), Postives = 103/162 (63.58%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV   I  WN+P  +  WK APAL CGN ++ K +  TP++AL +A+++ +AG P G+ NVV G G   G  L  H DV K+SFTG   TG  + E+AAK  +KP+TLELGGKSP IIF D ++  AV+ A  A F  QGQ CC G+R +V + + D F ++
Sbjct:  148 GVCLGIGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPVSALLLAEIYTKAGAPNGLFNVVQG-GAATGQFLCQHRDVAKVSFTGSVPTGMKIMEMAAKG-IKPITLELGGKSPLIIFSDCNMKNAVKGALLANFLTQGQVCCNGTRVFVQKEIADAFTKE 307          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ALDB_ECOLI (Aldehyde dehydrogenase B OS=Escherichia coli (strain K12) GN=aldB PE=1 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 1.614e-35
Identity = 82/170 (48.24%), Postives = 113/170 (66.47%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIF------DDADVDQAVELAHFALF-YNQGQCCCAGSRTYVHERVYDEFVEKA 489
            GV GQI+PWNFPLL+ +WK+APAL  GN +VLK A  TPL+ L + ++  +  LPPGV+NVV+G G   G  LA+   + K++FTG  + G+ + + A + N+ PVTLELGGKSP I F      +DA  D+A+E   FALF +NQG+ C   SR  V E +Y+ F+E+A
Sbjct:  162 GVVGQIIPWNFPLLMASWKMAPALAAGNCVVLKPARLTPLSVLLLMEIVGDL-LPPGVVNVVNGAGGVIGEYLATSKRIAKVAFTGSTEVGQQIMQYATQ-NIIPVTLELGGKSPNIFFADVMDEEDAFFDKALE--GFALFAFNQGEVCTCPSRALVQESIYERFMERA 327          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_RHIE6 (Betaine aldehyde dehydrogenase OS=Rhizobium etli (strain CIAT 652) GN=betB PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.108e-35
Identity = 82/177 (46.33%), Postives = 109/177 (61.58%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKARHVQ*GVLLAIPSE 531
            GV   I  WN+P  +  WK APAL  GN +V K +E TPL AL +A++ HEAGLP G+ NV+ G   T G  L +H DV K+S TG   TG+ V   AA S LK VT+ELGGKSP I+FDDAD+D AV  A    FY+ GQ C  G+R +V + +  EF+++ +     +L+  P +
Sbjct:  144 GVCVGIGAWNYPQQIACWKGAPALIAGNAMVFKPSENTPLGALKIAEILHEAGLPKGLFNVIQGDRDT-GPLLVNHPDVAKVSLTGSVPTGRRVAAAAAGS-LKHVTMELGGKSPLIVFDDADLDSAVGGAMLGNFYSTGQVCSNGTRVFVQKGIKTEFLKRLKARTEAMLIGDPMD 318          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_PSEPW (Betaine aldehyde dehydrogenase OS=Pseudomonas putida (strain W619) GN=betB PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.108e-35
Identity = 75/162 (46.30%), Postives = 103/162 (63.58%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV   I  WN+P+ +  WK APAL  GN ++ K +E T LT L +A+++ EAGLP GV NV++G G   G  L  H  ++K+SFTG   TGK V   A+ S+LK VT+ELGGKSP II  DAD+D+A ++A  A FY+ GQ C  G+R ++  ++   F  K
Sbjct:  144 GVTVGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTSLTTLKLAEIYTEAGLPDGVFNVLTGSGREVGTWLTEHPRIEKVSFTGGTTTGKKVMASASSSSLKEVTMELGGKSPLIICADADLDKAADIAMMANFYSSGQVCTNGTRVFIPAQMKAAFEAK 305          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB2_RHIME (Betaine aldehyde dehydrogenase 2 OS=Rhizobium meliloti GN=betB2 PE=3 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 2.108e-35
Identity = 76/162 (46.91%), Postives = 104/162 (64.20%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV   I  WN+P+ +  WK APAL CGN ++ K +E TPL+AL +A++  EAGLPPGV N+V G G   GA LA+H  + K+S TG   TG  V   AA + ++PVT+ELGGKS  I+FDDADV+ AV  A    FY+ GQ C  G+R ++   + + F+ +
Sbjct:  146 GVCLGIGAWNYPIQIAAWKAAPALACGNAMIFKPSEVTPLSALKLAEILTEAGLPPGVFNIVQGAG-DVGAELATHPAIAKVSLTGSVKTGARVAS-AAMAGIRPVTMELGGKSALIVFDDADVEAAVSGAILGNFYSAGQICSNGTRVFLQRGIREAFLAR 305          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_RHIEC (Betaine aldehyde dehydrogenase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=betB PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.753e-35
Identity = 83/175 (47.43%), Postives = 108/175 (61.71%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKARHVQ*GVLLAIP 525
            GV   I  WN+P  +  WK APAL  GN +V K +E TPL AL +A++ HEAGLP G+ NV+ G   T G  L +H DV K+S TG   TG+ V   AA S LK VT+ELGGKSP I+FDDAD+D AV  A    FY+ GQ C  G+R +V + V  EF+++ +     +L+  P
Sbjct:  144 GVCVGIGAWNYPQQIACWKGAPALISGNAMVFKPSENTPLGALKIAEILHEAGLPKGLFNVIQGDRDT-GPLLVNHPDVAKVSLTGSVPTGRRVAAAAAGS-LKHVTMELGGKSPLIVFDDADLDSAVGGAMLGNFYSTGQVCSNGTRVFVQKAVKAEFLKRLKARTEAMLIGDP 316          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: AL9A1_ORYLA (Aldehyde dehydrogenase family 9 member A1 OS=Oryzias latipes GN=aldh9A1 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.753e-35
Identity = 78/162 (48.15%), Postives = 106/162 (65.43%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV   I  WN+P  +   K APAL CGN +V K +  TP+TA+ +A+++ EAG+P G+  VV G G   G+ L +H  V K+SFTG   TGK V E++AK  +K VTLELGGKSP IIF D D++ AV+ A  A F  QGQ CC G+R +VH+ +  +F+E+
Sbjct:  159 GVCVGIGAWNYPFQIAACKSAPALACGNAMVFKPSPFTPVTAVILAEIYKEAGVPDGLFCVVQG-GAETGSLLCNHPKVAKVSFTGSVPTGKKVMEMSAKG-VKQVTLELGGKSPLIIFKDCDLENAVKGALMANFLTQGQVCCNGTRVFVHKDILPQFLEE 318          
The following BLAST results are available for this feature:
BLAST of FC869243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BETB_BRUA23.606e-3646.30Betaine aldehyde dehydrogenase OS=Brucella abortus... [more]
BETB_BRUA13.606e-3646.30Betaine aldehyde dehydrogenase OS=Brucella abortus... [more]
BETB_RHILW5.546e-3646.86Betaine aldehyde dehydrogenase OS=Rhizobium legumi... [more]
AL9A1_RAT9.460e-3646.914-trimethylaminobutyraldehyde dehydrogenase OS=Rat... [more]
ALDB_ECOLI1.614e-3548.24Aldehyde dehydrogenase B OS=Escherichia coli (stra... [more]
BETB_RHIE62.108e-3546.33Betaine aldehyde dehydrogenase OS=Rhizobium etli (... [more]
BETB_PSEPW2.108e-3546.30Betaine aldehyde dehydrogenase OS=Pseudomonas puti... [more]
BETB2_RHIME2.108e-3546.91Betaine aldehyde dehydrogenase 2 OS=Rhizobium meli... [more]
BETB_RHIEC2.753e-3547.43Betaine aldehyde dehydrogenase OS=Rhizobium etli (... [more]
AL9A1_ORYLA2.753e-3548.15Aldehyde dehydrogenase family 9 member A1 OS=Oryzi... [more]

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Properties
Property NameValue
Genbank descriptionC31010B01EF AbioticL1 Citrus clementina cDNA clone C31010B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869243 ID=FC869243; Name=FC869243; organism=Citrus clementina; type=EST; length=596bp
GGCGTTGCTGGCCAGATAGTTCCCTGGAACTTTCCTCTTCTCTTGTTTAC
TTGGAAAGTAGCGCCTGCACTAACTTGTGGCAATACTATTGTTCTAAAGT
CTGCTGAGCAAACGCCTTTGACTGCTCTGTATGTGGCAAAGCTATTCCAT
GAGGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCC
AACAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTT
TTACAGGACACTGTGATACTGGTAAGATTGTTCAGGAACTGGCTGCAAAA
AGCAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTAT
AATATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTG
CTTTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTAT
GTACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAGGCACGTGCA
ATGAGGCGTATTGTTGGCGATCCCTTCAGAGTGGTGTTGAACAAGGTCCT
CAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAAGTACATAAGGT
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