FC869243
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ROCA_BACAC (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=rocA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 9.776e-26 Identity = 69/181 (38.12%), Postives = 93/181 (51.38%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN-----LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKARHVQ*GVLLAIPS 528 GV I PWNFP + AL GNT++LK A TP+ A ++ EAGLP GV+N V G G G L H +SFTG D G + E AAK N LK V E+GGK ++ +AD++ A + + F GQ C A SR +HE VYD + +A + + +A P+ Sbjct: 173 GVGVIISPWNFPFAIMAGMTTAALVSGNTVLLKPASTTPVVAAKFMEVLEEAGLPAGVVNFVPGNGSEVGDYLVDHPRTRFISFTGSRDVGIRIYERAAKVNPGQIWLKRVIAEMGGKDTIVVDKEADLELAAKSIVASAFGFSGQKCSACSRAVIHEDVYDHVLNRAVELTKELTVANPA 353 HSP 2 Score: 22.3274 bits (46), Expect = 9.776e-26 Identity = 8/20 (40.00%), Postives = 11/20 (55.00%), Query Frame = 2 Query: 533 GVEQGPQIDPEQFEKVLKYI 592 G GP D F+KV+ Y+ Sbjct: 356 GTNMGPVNDQAAFDKVMSYV 375
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ROCA_BACAA (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus anthracis (strain A0248) GN=rocA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 9.776e-26 Identity = 69/181 (38.12%), Postives = 93/181 (51.38%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN-----LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKARHVQ*GVLLAIPS 528 GV I PWNFP + AL GNT++LK A TP+ A ++ EAGLP GV+N V G G G L H +SFTG D G + E AAK N LK V E+GGK ++ +AD++ A + + F GQ C A SR +HE VYD + +A + + +A P+ Sbjct: 173 GVGVIISPWNFPFAIMAGMTTAALVSGNTVLLKPASTTPVVAAKFMEVLEEAGLPAGVVNFVPGNGSEVGDYLVDHPRTRFISFTGSRDVGIRIYERAAKVNPGQIWLKRVIAEMGGKDTIVVDKEADLELAAKSIVASAFGFSGQKCSACSRAVIHEDVYDHVLNRAVELTKELTVANPA 353 HSP 2 Score: 22.3274 bits (46), Expect = 9.776e-26 Identity = 8/20 (40.00%), Postives = 11/20 (55.00%), Query Frame = 2 Query: 533 GVEQGPQIDPEQFEKVLKYI 592 G GP D F+KV+ Y+ Sbjct: 356 GTNMGPVNDQAAFDKVMSYV 375
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ROCA_BACCR (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=rocA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.272e-25 Identity = 69/181 (38.12%), Postives = 93/181 (51.38%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN-----LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKARHVQ*GVLLAIPS 528 GV I PWNFP + AL GNT++LK A TP+ A ++ EAGLP GV+N V G G G L H +SFTG D G + E AAK N LK V E+GGK ++ +AD++ A + + F GQ C A SR +HE VYD + +A + + +A P+ Sbjct: 173 GVGVIISPWNFPFAIMAGMTTAALVSGNTVLLKPASTTPVVAAKFMEVLEEAGLPAGVVNFVPGNGSEVGDYLVDHPRTRFVSFTGSRDVGIRIYERAAKVNPGQIWLKRVIAEMGGKDTIVVDKEADLELAAKSIVASAFGFSGQKCSACSRAVIHEDVYDHVLNRAVELTKELTVANPA 353 HSP 2 Score: 22.3274 bits (46), Expect = 1.272e-25 Identity = 8/20 (40.00%), Postives = 11/20 (55.00%), Query Frame = 2 Query: 533 GVEQGPQIDPEQFEKVLKYI 592 G GP D F+KV+ Y+ Sbjct: 356 GTNMGPVNDQAAFDKVMSYV 375
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ROCA_BACC4 (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus cereus (strain B4264) GN=rocA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.272e-25 Identity = 69/181 (38.12%), Postives = 93/181 (51.38%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN-----LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKARHVQ*GVLLAIPS 528 GV I PWNFP + AL GNT++LK A TP+ A ++ EAGLP GV+N V G G G L H +SFTG D G + E AAK N LK V E+GGK ++ +AD++ A + + F GQ C A SR +HE VYD + +A + + +A P+ Sbjct: 173 GVGVIISPWNFPFAIMAGMTTAALVSGNTVLLKPASTTPVVAAKFMEVLEEAGLPAGVVNFVPGNGSEVGDYLVDHPRTRFVSFTGSRDVGIRIYERAAKVNPGQIWLKRVIAEMGGKDTIVVDKEADLELAAKSIVASAFGFSGQKCSACSRAVIHEDVYDHVLNRAVELTKELTVANPA 353 HSP 2 Score: 22.3274 bits (46), Expect = 1.272e-25 Identity = 8/20 (40.00%), Postives = 11/20 (55.00%), Query Frame = 2 Query: 533 GVEQGPQIDPEQFEKVLKYI 592 G GP D F+KV+ Y+ Sbjct: 356 GTNMGPVNDQAAFDKVMSYV 375
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ROCA_BACC2 (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus cereus (strain G9842) GN=rocA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.272e-25 Identity = 69/181 (38.12%), Postives = 93/181 (51.38%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN-----LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKARHVQ*GVLLAIPS 528 GV I PWNFP + AL GNT++LK A TP+ A ++ EAGLP GV+N V G G G L H +SFTG D G + E AAK N LK V E+GGK ++ +AD++ A + + F GQ C A SR +HE VYD + +A + + +A P+ Sbjct: 173 GVGVIISPWNFPFAIMAGMTTAALVSGNTVLLKPASTTPVVAAKFMEVLEEAGLPAGVVNFVPGNGSEVGDYLVDHPRTRFVSFTGSRDVGIRIYERAAKVNPGQIWLKRVIAEMGGKDTIVVDKEADLELAAKSIVASAFGFSGQKCSACSRAVIHEDVYDHVLNRAVELTKELTVANPA 353 HSP 2 Score: 22.3274 bits (46), Expect = 1.272e-25 Identity = 8/20 (40.00%), Postives = 11/20 (55.00%), Query Frame = 2 Query: 533 GVEQGPQIDPEQFEKVLKYI 592 G GP D F+KV+ Y+ Sbjct: 356 GTNMGPVNDQAAFDKVMSYV 375
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ROCA_STAS1 (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=rocA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 2.805e-25 Identity = 68/168 (40.48%), Postives = 86/168 (51.19%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN-----LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 489 G I PWNFP + + GNT++LK AE TPLTA + ++ EAGLP GV+N V G G L + ++FTG TG + E AAK LK V E+GGK ++ D D D A E + F GQ C A SR VH+ VYDE +EKA Sbjct: 173 GTGVTIPPWNFPFAIMAGTTLAPVVAGNTVLLKPAEDTPLTAYKLMEILEEAGLPKGVVNFVPGDPKEIGDYLVDSVHTHFVTFTGSRATGTRIFERAAKVQDGQQFLKRVIAEMGGKDAIVVDKDIDTDLAAESIVSSAFGFSGQKCSACSRAIVHKDVYDEVLEKA 340 HSP 2 Score: 22.7126 bits (47), Expect = 2.805e-25 Identity = 8/22 (36.36%), Postives = 14/22 (63.64%), Query Frame = 2 Query: 527 QSGVEQGPQIDPEQFEKVLKYI 592 ++ GP I+ +QF+K+ YI Sbjct: 353 ENNTYMGPVINQKQFDKIKNYI 374
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: LADH_METMP (Lactaldehyde dehydrogenase OS=Methanococcus maripaludis GN=MMP1487 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 5.753e-25 Identity = 58/165 (35.15%), Postives = 95/165 (57.58%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFH----EAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVE 483 GV G I P+NFPL L T K+ PA+ GN++VL + + P+ A+Y+ K+ + +P GV N+ +G G G ++ + +V+ +SFTG + G + ++ + +K VTLELGG +P I+ D+D+ A + A + F N GQ C + + V E V + F + Sbjct: 131 GVIGAITPFNFPLNLATHKIGPAIATGNSVVLHPSSKAPIVAIYLTKIIEHVLKQMDIPRGVFNLATGNGEIVGDEISKNDNVNMVSFTGSVEVG---ESISKNAKMKKVTLELGGNNPMIVLKDSDIKLAAKSAVKSKFLNAGQVCISVGQVLVEEEVVETFTK 292
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ROCA_BACWK (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus weihenstephanensis (strain KBAB4) GN=rocA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 7.513e-25 Identity = 66/168 (39.29%), Postives = 87/168 (51.79%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN-----LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 489 GV I PWNFP + A+ GNT++LK A TP+ A ++ EAGLP GV+N V G G G L H +SFTG D G + E AAK N LK V E+GGK ++ +AD++ A + + F GQ C A SR +HE VYD + +A Sbjct: 173 GVGVIISPWNFPFAIMAGMTTAAVVSGNTVLLKPASTTPVVAAKFMEVLEEAGLPAGVVNFVPGNGSEVGDYLVDHPRTRFVSFTGSRDVGIRIYERAAKVNPGQIWLKRVIAEMGGKDTIVVDKEADLELAAKSIVASAFGFSGQKCSACSRAVIHEDVYDHVLNRA 340
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ROCA_BACLD (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=rocA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 7.513e-25 Identity = 62/167 (37.13%), Postives = 88/167 (52.69%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK-----SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486 GV I PWNF + + GNT+VLK A P+ A ++ E+GLP GV+N V G G G L H ++FTG + G + E AAK ++LK V E+GGK ++ +D D++ A + + F GQ C AGSR VHE+VYDE +++ Sbjct: 174 GVTVVIPPWNFLFAIMAGTTVAPIVTGNTVVLKPASAAPVIAAKFVEVLEESGLPKGVVNFVPGSGAEVGDYLVDHPKTSIITFTGSREVGTRIFERAAKVQPGQTHLKQVIAEMGGKDTVVVDEDCDIELAAQSIFTSAFGFAGQKCSAGSRAVVHEKVYDEVLKR 340
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ROCA_OCEIH (1-pyrroline-5-carboxylate dehydrogenase OS=Oceanobacillus iheyensis GN=rocA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 9.813e-25 Identity = 65/177 (36.72%), Postives = 92/177 (51.98%), Query Frame = 1 Query: 16 IVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK-----SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKARHVQ*GVLLAIPSE 531 I PWNF + + GN ++LK +E TP+ A + ++ EAGLP GVLN V G G L H D ++FTG TG + E A K ++LK + E+GGK I+ + AD+D A E + F GQ C A SR +HE VYDE +EK+ + + + P+E Sbjct: 178 IPPWNFAFAIVCGTTVAPIVAGNPVLLKPSENTPVIAYKLVEVLEEAGLPKGVLNFVPGDPAEIGDYLVDHKDTHFINFTGSRATGVRIFERATKIQDGQTHLKRIVAEMGGKDTIIVDESADLDLAAESIVHSAFGFSGQKCSACSRAVIHESVYDEVIEKSVELAKTLTVGNPTE 354 The following BLAST results are available for this feature:
BLAST of FC869243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869243 ID=FC869243; Name=FC869243; organism=Citrus clementina; type=EST; length=596bpback to top |