FC869243
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: LADH_METM7 (Lactaldehyde dehydrogenase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=MmarC7_0731 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 9.813e-25 Identity = 56/165 (33.94%), Postives = 94/165 (56.97%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFH----EAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVE 483 GV G I P+NFPL L T K+ PA+ GN+++L + + P+ A+Y+ K+ + +P GV N+ +G G G ++ + ++ +SFTG + G + ++ + +K VTLELGG +P I+ D+D+ A + A + F N GQ C + + V E V + F + Sbjct: 131 GVVGAITPFNFPLNLITHKIGPAIATGNSVILHPSSKAPIAAIYLTKIIEHVLKQMDIPRGVFNLATGNGDIVGDEISKNDKINMVSFTGSVEIG---ESISKNAKMKKVTLELGGNNPMIVLKDSDIKLAAKSAVKSKFLNAGQVCISVGQVLVEEEVLETFTK 292
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ROCA_STAAW (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain MW2) GN=rocA PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.047e-24 Identity = 64/168 (38.10%), Postives = 87/168 (51.79%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA-----KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 489 G I PWNFP + + GNT++LK AE TP A + ++ EAGLP GV+N V G G L H D ++FTG TG + E +A ++ LK V E+GGK ++ ++ D D A E + F GQ C A SR VH+ VYDE +EK+ Sbjct: 173 GTGVTIPPWNFPFAIMAGTTLAPVVAGNTVLLKPAEDTPYIAYKLMEILEEAGLPKGVVNFVPGDPKEIGDYLVDHKDTHFVTFTGSRATGTRIYERSAVVQEGQNFLKRVIAEMGGKDAIVVDENIDTDMAAEAIVTSAFGFSGQKCSACSRAIVHKDVYDEVLEKS 340 HSP 2 Score: 22.3274 bits (46), Expect = 1.047e-24 Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 2 Query: 545 GPQIDPEQFEKVLKYI 592 GP I+ +QF+K+ YI Sbjct: 359 GPVINKKQFDKIKNYI 374
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ROCA_STAAT (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=rocA PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.047e-24 Identity = 64/168 (38.10%), Postives = 87/168 (51.79%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA-----KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 489 G I PWNFP + + GNT++LK AE TP A + ++ EAGLP GV+N V G G L H D ++FTG TG + E +A ++ LK V E+GGK ++ ++ D D A E + F GQ C A SR VH+ VYDE +EK+ Sbjct: 173 GTGVTIPPWNFPFAIMAGTTLAPVVAGNTVLLKPAEDTPYIAYKLMEILEEAGLPKGVVNFVPGDPKEIGDYLVDHKDTHFVTFTGSRATGTRIYERSAVVQEGQNFLKRVIAEMGGKDAIVVDENIDTDMAAEAIVTSAFGFSGQKCSACSRAIVHKDVYDEVLEKS 340 HSP 2 Score: 22.3274 bits (46), Expect = 1.047e-24 Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 2 Query: 545 GPQIDPEQFEKVLKYI 592 GP I+ +QF+K+ YI Sbjct: 359 GPVINKKQFDKIKNYI 374
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ROCA_STAAR (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain MRSA252) GN=rocA PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.047e-24 Identity = 64/168 (38.10%), Postives = 87/168 (51.79%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA-----KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 489 G I PWNFP + + GNT++LK AE TP A + ++ EAGLP GV+N V G G L H D ++FTG TG + E +A ++ LK V E+GGK ++ ++ D D A E + F GQ C A SR VH+ VYDE +EK+ Sbjct: 173 GTGVTIPPWNFPFAIMAGTTLAPVVAGNTVLLKPAEDTPYIAYKLMEILEEAGLPKGVVNFVPGDPKEIGDYLVDHKDTHFVTFTGSRATGTRIYERSAVVQEGQNFLKRVIAEMGGKDAIVVDENIDTDMAAEAIVTSAFGFSGQKCSACSRAIVHKDVYDEVLEKS 340 HSP 2 Score: 22.3274 bits (46), Expect = 1.047e-24 Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 2 Query: 545 GPQIDPEQFEKVLKYI 592 GP I+ +QF+K+ YI Sbjct: 359 GPVINKKQFDKIKNYI 374
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ROCA_STAAN (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain N315) GN=rocA PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.047e-24 Identity = 64/168 (38.10%), Postives = 87/168 (51.79%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA-----KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 489 G I PWNFP + + GNT++LK AE TP A + ++ EAGLP GV+N V G G L H D ++FTG TG + E +A ++ LK V E+GGK ++ ++ D D A E + F GQ C A SR VH+ VYDE +EK+ Sbjct: 173 GTGVTIPPWNFPFAIMAGTTLAPVVAGNTVLLKPAEDTPYIAYKLMEILEEAGLPKGVVNFVPGDPKEIGDYLVDHKDTHFVTFTGSRATGTRIYERSAVVQEGQNFLKRVIAEMGGKDAIVVDENIDTDMAAEAIVTSAFGFSGQKCSACSRAIVHKDVYDEVLEKS 340 HSP 2 Score: 22.3274 bits (46), Expect = 1.047e-24 Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 2 Query: 545 GPQIDPEQFEKVLKYI 592 GP I+ +QF+K+ YI Sbjct: 359 GPVINKKQFDKIKNYI 374
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ROCA_STAAM (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=rocA PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.047e-24 Identity = 64/168 (38.10%), Postives = 87/168 (51.79%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA-----KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 489 G I PWNFP + + GNT++LK AE TP A + ++ EAGLP GV+N V G G L H D ++FTG TG + E +A ++ LK V E+GGK ++ ++ D D A E + F GQ C A SR VH+ VYDE +EK+ Sbjct: 173 GTGVTIPPWNFPFAIMAGTTLAPVVAGNTVLLKPAEDTPYIAYKLMEILEEAGLPKGVVNFVPGDPKEIGDYLVDHKDTHFVTFTGSRATGTRIYERSAVVQEGQNFLKRVIAEMGGKDAIVVDENIDTDMAAEAIVTSAFGFSGQKCSACSRAIVHKDVYDEVLEKS 340 HSP 2 Score: 22.3274 bits (46), Expect = 1.047e-24 Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 2 Query: 545 GPQIDPEQFEKVLKYI 592 GP I+ +QF+K+ YI Sbjct: 359 GPVINKKQFDKIKNYI 374
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ROCA_STAAE (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain Newman) GN=rocA PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.047e-24 Identity = 64/168 (38.10%), Postives = 87/168 (51.79%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA-----KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 489 G I PWNFP + + GNT++LK AE TP A + ++ EAGLP GV+N V G G L H D ++FTG TG + E +A ++ LK V E+GGK ++ ++ D D A E + F GQ C A SR VH+ VYDE +EK+ Sbjct: 173 GTGVTIPPWNFPFAIMAGTTLAPVVAGNTVLLKPAEDTPYIAYKLMEILEEAGLPKGVVNFVPGDPKEIGDYLVDHKDTHFVTFTGSRATGTRIYERSAVVQEGQNFLKRVIAEMGGKDAIVVDENIDTDMAAEAIVTSAFGFSGQKCSACSRAIVHKDVYDEVLEKS 340 HSP 2 Score: 22.3274 bits (46), Expect = 1.047e-24 Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 2 Query: 545 GPQIDPEQFEKVLKYI 592 GP I+ +QF+K+ YI Sbjct: 359 GPVINKKQFDKIKNYI 374
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ROCA_STAAC (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain COL) GN=rocA PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.047e-24 Identity = 64/168 (38.10%), Postives = 87/168 (51.79%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA-----KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 489 G I PWNFP + + GNT++LK AE TP A + ++ EAGLP GV+N V G G L H D ++FTG TG + E +A ++ LK V E+GGK ++ ++ D D A E + F GQ C A SR VH+ VYDE +EK+ Sbjct: 173 GTGVTIPPWNFPFAIMAGTTLAPVVAGNTVLLKPAEDTPYIAYKLMEILEEAGLPKGVVNFVPGDPKEIGDYLVDHKDTHFVTFTGSRATGTRIYERSAVVQEGQNFLKRVIAEMGGKDAIVVDENIDTDMAAEAIVTSAFGFSGQKCSACSRAIVHKDVYDEVLEKS 340 HSP 2 Score: 22.3274 bits (46), Expect = 1.047e-24 Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 2 Query: 545 GPQIDPEQFEKVLKYI 592 GP I+ +QF+K+ YI Sbjct: 359 GPVINKKQFDKIKNYI 374
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ROCA_STAAB (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=rocA PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.047e-24 Identity = 64/168 (38.10%), Postives = 87/168 (51.79%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA-----KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 489 G I PWNFP + + GNT++LK AE TP A + ++ EAGLP GV+N V G G L H D ++FTG TG + E +A ++ LK V E+GGK ++ ++ D D A E + F GQ C A SR VH+ VYDE +EK+ Sbjct: 173 GTGVTIPPWNFPFAIMAGTTLAPVVAGNTVLLKPAEDTPYIAYKLMEILEEAGLPKGVVNFVPGDPKEIGDYLVDHKDTHFVTFTGSRATGTRIYERSAVVQEGQNFLKRVIAEMGGKDAIVVDENIDTDMAAEAIVTSAFGFSGQKCSACSRAIVHKDVYDEVLEKS 340 HSP 2 Score: 22.3274 bits (46), Expect = 1.047e-24 Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 2 Query: 545 GPQIDPEQFEKVLKYI 592 GP I+ +QF+K+ YI Sbjct: 359 GPVINKKQFDKIKNYI 374
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ROCA_STAA9 (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain JH9) GN=rocA PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.047e-24 Identity = 64/168 (38.10%), Postives = 87/168 (51.79%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA-----KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 489 G I PWNFP + + GNT++LK AE TP A + ++ EAGLP GV+N V G G L H D ++FTG TG + E +A ++ LK V E+GGK ++ ++ D D A E + F GQ C A SR VH+ VYDE +EK+ Sbjct: 173 GTGVTIPPWNFPFAIMAGTTLAPVVAGNTVLLKPAEDTPYIAYKLMEILEEAGLPKGVVNFVPGDPKEIGDYLVDHKDTHFVTFTGSRATGTRIYERSAVVQEGQNFLKRVIAEMGGKDAIVVDENIDTDMAAEAIVTSAFGFSGQKCSACSRAIVHKDVYDEVLEKS 340 HSP 2 Score: 22.3274 bits (46), Expect = 1.047e-24 Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 2 Query: 545 GPQIDPEQFEKVLKYI 592 GP I+ +QF+K+ YI Sbjct: 359 GPVINKKQFDKIKNYI 374 The following BLAST results are available for this feature:
BLAST of FC869243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869243 ID=FC869243; Name=FC869243; organism=Citrus clementina; type=EST; length=596bpback to top |