FC869243
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ROCA_STAA8 (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain NCTC 8325) GN=rocA PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.047e-24 Identity = 64/168 (38.10%), Postives = 87/168 (51.79%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA-----KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 489 G I PWNFP + + GNT++LK AE TP A + ++ EAGLP GV+N V G G L H D ++FTG TG + E +A ++ LK V E+GGK ++ ++ D D A E + F GQ C A SR VH+ VYDE +EK+ Sbjct: 173 GTGVTIPPWNFPFAIMAGTTLAPVVAGNTVLLKPAEDTPYIAYKLMEILEEAGLPKGVVNFVPGDPKEIGDYLVDHKDTHFVTFTGSRATGTRIYERSAVVQEGQNFLKRVIAEMGGKDAIVVDENIDTDMAAEAIVTSAFGFSGQKCSACSRAIVHKDVYDEVLEKS 340 HSP 2 Score: 22.3274 bits (46), Expect = 1.047e-24 Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 2 Query: 545 GPQIDPEQFEKVLKYI 592 GP I+ +QF+K+ YI Sbjct: 359 GPVINKKQFDKIKNYI 374
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ROCA_STAA3 (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain USA300) GN=rocA PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.047e-24 Identity = 64/168 (38.10%), Postives = 87/168 (51.79%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA-----KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 489 G I PWNFP + + GNT++LK AE TP A + ++ EAGLP GV+N V G G L H D ++FTG TG + E +A ++ LK V E+GGK ++ ++ D D A E + F GQ C A SR VH+ VYDE +EK+ Sbjct: 173 GTGVTIPPWNFPFAIMAGTTLAPVVAGNTVLLKPAEDTPYIAYKLMEILEEAGLPKGVVNFVPGDPKEIGDYLVDHKDTHFVTFTGSRATGTRIYERSAVVQEGQNFLKRVIAEMGGKDAIVVDENIDTDMAAEAIVTSAFGFSGQKCSACSRAIVHKDVYDEVLEKS 340 HSP 2 Score: 22.3274 bits (46), Expect = 1.047e-24 Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 2 Query: 545 GPQIDPEQFEKVLKYI 592 GP I+ +QF+K+ YI Sbjct: 359 GPVINKKQFDKIKNYI 374
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ROCA_STAA2 (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain JH1) GN=rocA PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.047e-24 Identity = 64/168 (38.10%), Postives = 87/168 (51.79%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA-----KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 489 G I PWNFP + + GNT++LK AE TP A + ++ EAGLP GV+N V G G L H D ++FTG TG + E +A ++ LK V E+GGK ++ ++ D D A E + F GQ C A SR VH+ VYDE +EK+ Sbjct: 173 GTGVTIPPWNFPFAIMAGTTLAPVVAGNTVLLKPAEDTPYIAYKLMEILEEAGLPKGVVNFVPGDPKEIGDYLVDHKDTHFVTFTGSRATGTRIYERSAVVQEGQNFLKRVIAEMGGKDAIVVDENIDTDMAAEAIVTSAFGFSGQKCSACSRAIVHKDVYDEVLEKS 340 HSP 2 Score: 22.3274 bits (46), Expect = 1.047e-24 Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 2 Query: 545 GPQIDPEQFEKVLKYI 592 GP I+ +QF+K+ YI Sbjct: 359 GPVINKKQFDKIKNYI 374
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ROCA_STAA1 (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=rocA PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.047e-24 Identity = 64/168 (38.10%), Postives = 87/168 (51.79%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA-----KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 489 G I PWNFP + + GNT++LK AE TP A + ++ EAGLP GV+N V G G L H D ++FTG TG + E +A ++ LK V E+GGK ++ ++ D D A E + F GQ C A SR VH+ VYDE +EK+ Sbjct: 173 GTGVTIPPWNFPFAIMAGTTLAPVVAGNTVLLKPAEDTPYIAYKLMEILEEAGLPKGVVNFVPGDPKEIGDYLVDHKDTHFVTFTGSRATGTRIYERSAVVQEGQNFLKRVIAEMGGKDAIVVDENIDTDMAAEAIVTSAFGFSGQKCSACSRAIVHKDVYDEVLEKS 340 HSP 2 Score: 22.3274 bits (46), Expect = 1.047e-24 Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 2 Query: 545 GPQIDPEQFEKVLKYI 592 GP I+ +QF+K+ YI Sbjct: 359 GPVINKKQFDKIKNYI 374
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ROCA_STAES (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=rocA PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.363e-24 Identity = 65/168 (38.69%), Postives = 87/168 (51.79%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA-----KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 489 G I PWNFP + + GNT++LK AE T LTA + ++ EAGLP GV+N V G G L H D ++FTG TG + E +A + LK V E+GGK ++ ++ D D A E + F GQ C A SR VH+ V+DE +EKA Sbjct: 173 GTGVTIPPWNFPFAIMAGTTLAPVVAGNTVLLKPAEDTVLTAYKLMEILEEAGLPQGVVNFVPGDPKEIGDYLVDHKDTHFVTFTGSRATGTRIYERSAVVQEGQQFLKRVIAEMGGKDAIVVDNNVDTDLAAEAIVTSAFGFSGQKCSACSRAIVHQDVHDEILEKA 340 HSP 2 Score: 22.3274 bits (46), Expect = 1.363e-24 Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 2 Query: 545 GPQIDPEQFEKVLKYI 592 GP I+ +QF+K+ YI Sbjct: 359 GPVINQKQFDKIKNYI 374
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ROCA_STAEQ (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=rocA PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.363e-24 Identity = 65/168 (38.69%), Postives = 87/168 (51.79%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA-----KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 489 G I PWNFP + + GNT++LK AE T LTA + ++ EAGLP GV+N V G G L H D ++FTG TG + E +A + LK V E+GGK ++ ++ D D A E + F GQ C A SR VH+ V+DE +EKA Sbjct: 173 GTGVTIPPWNFPFAIMAGTTLAPVVAGNTVLLKPAEDTVLTAYKLMEILEEAGLPQGVVNFVPGDPKEIGDYLVDHKDTHFVTFTGSRATGTRIYERSAVVQEGQQFLKRVIAEMGGKDAIVVDNNVDTDLAAEAIVTSAFGFSGQKCSACSRAIVHQDVHDEILEKA 340 HSP 2 Score: 22.3274 bits (46), Expect = 1.363e-24 Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 2 Query: 545 GPQIDPEQFEKVLKYI 592 GP I+ +QF+K+ YI Sbjct: 359 GPVINQKQFDKIKNYI 374
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: GAPN_STREI (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Streptococcus equinus GN=gapN PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.674e-24 Identity = 63/177 (35.59%), Postives = 96/177 (54.24%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKARHVQ*GVLLAIPSE 531 G+ I P+N+P+ L K+APAL GN + LK Q ++ L +A+ F EAGLP GV N ++G G G + H V+ ++FTG G+ + LA ++P+ LELGGK II +DAD+D A + + GQ C A R V + + D+ VEK + + + +P + Sbjct: 145 GLVLAISPFNYPINLAGSKIAPALISGNVVALKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSVIGDYIVEHEAVNYINFTGSTPVGEHIGHLA---GMRPIMLELGGKDSAIILEDADLDLAAKNIVAGAYGYSGQRCTAVKRVLVMDSIADKLVEKVSALVNNLTVGMPED 318
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ASTD_NOVAD (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=astD PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.674e-24 Identity = 58/175 (33.14%), Postives = 93/175 (53.14%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKARHVQ*GVLLAIP 525 GV + P+NFP L + PAL GN +V K +E+TP T +A+ FH AG+P V+ V+ G GP G AL +H +D + FTG G + A + K V LE+GG +P +++D ++ A L + F + GQ C A R + ++DE ++ + + +++ P Sbjct: 123 GVLAVLGPYNFPAHLPNGHIVPALIAGNAVVFKPSEKTPATGEMLAQCFHRAGIPAAVVQVLIG-GPEEGQALVAHDGIDGVLFTGSAHAGIAINRKLASNPGKIVALEMGGNNPIVVWDTPKIEDAATLIVQSAFTSAGQRCTAARRLIIKASMFDEVIDHVKRLADRIIVGAP 296
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: LADH_METM5 (Lactaldehyde dehydrogenase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=MmarC5_0090 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.186e-24 Identity = 55/165 (33.33%), Postives = 94/165 (56.97%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFH----EAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVE 483 GV G I P+NFPL L T K+ PA+ GN++VL + + P+ A+Y+ K+ + +P G+ N+ +G G G ++ + +++ +SFTG + G + ++ + +K V LELGG +P I+ D+D+ A + A + F N GQ C + + V E V + F + Sbjct: 131 GVVGAITPFNFPLNLITHKIGPAIATGNSVVLHPSSKAPIVAIYLTKIIEHVLKQMDVPRGIFNLATGNGDIVGDEISKNDNINMVSFTGSVEVG---ESISKNAKMKKVALELGGNNPMIVLKDSDIKLAAKSAVKSKFLNAGQVCISVGQVLVEEEVLETFTK 292
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: GABD2_MYCTU (Putative succinate-semialdehyde dehydrogenase [NADP+] 2 OS=Mycobacterium tuberculosis GN=gabD2 PE=1 SV=3) HSP 1 Score: 112.079 bits (279), Expect = 2.186e-24 Identity = 65/162 (40.12%), Postives = 87/162 (53.70%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486 GV G I PWN+P+ L PAL GN +VLK QTP AL A+L + AGLP + +V G G G A+ + D L FTG TG + E A + L + ELGGK+P I+ A++D+ + A A F N GQ C + R YV + + +EF K Sbjct: 149 GVVGVISPWNYPMTLTVSDSVPALVAGNAVVLKPDSQTPYCALACAELLYRAGLPRALYAIVPGPGSVVGTAITDNCDY--LMFTGSSATGSRLAEHAGR-RLIGFSAELGGKNPMIVARGANLDKVAKAATRACFSNAGQLCISIERIYVEKDIAEEFTRK 307 The following BLAST results are available for this feature:
BLAST of FC869243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869243 ID=FC869243; Name=FC869243; organism=Citrus clementina; type=EST; length=596bpback to top |