FC869243
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: GABD2_MYCTA (Putative succinate-semialdehyde dehydrogenase [NADP+] 2 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=gabD2 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.186e-24 Identity = 65/162 (40.12%), Postives = 87/162 (53.70%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486 GV G I PWN+P+ L PAL GN +VLK QTP AL A+L + AGLP + +V G G G A+ + D L FTG TG + E A + L + ELGGK+P I+ A++D+ + A A F N GQ C + R YV + + +EF K Sbjct: 149 GVVGVISPWNYPMTLTVSDSVPALVAGNAVVLKPDSQTPYCALACAELLYRAGLPRALYAIVPGPGSVVGTAITDNCDY--LMFTGSSATGSRLAEHAGR-RLIGFSAELGGKNPMIVARGANLDKVAKAATRACFSNAGQLCISIERIYVEKDIAEEFTRK 307
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: GABD2_MYCBP (Putative succinate-semialdehyde dehydrogenase [NADP+] 2 OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=gabD2 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.186e-24 Identity = 65/162 (40.12%), Postives = 87/162 (53.70%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486 GV G I PWN+P+ L PAL GN +VLK QTP AL A+L + AGLP + +V G G G A+ + D L FTG TG + E A + L + ELGGK+P I+ A++D+ + A A F N GQ C + R YV + + +EF K Sbjct: 149 GVVGVISPWNYPMTLTVSDSVPALVAGNAVVLKPDSQTPYCALACAELLYRAGLPRALYAIVPGPGSVVGTAITDNCDY--LMFTGSSATGSRLAEHAGR-RLIGFSAELGGKNPMIVARGANLDKVAKAATRACFSNAGQLCISIERIYVEKDIAEEFTRK 307
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: GABD2_MYCBO (Putative succinate-semialdehyde dehydrogenase [NADP+] 2 OS=Mycobacterium bovis GN=gabD2 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.186e-24 Identity = 65/162 (40.12%), Postives = 87/162 (53.70%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486 GV G I PWN+P+ L PAL GN +VLK QTP AL A+L + AGLP + +V G G G A+ + D L FTG TG + E A + L + ELGGK+P I+ A++D+ + A A F N GQ C + R YV + + +EF K Sbjct: 149 GVVGVISPWNYPMTLTVSDSVPALVAGNAVVLKPDSQTPYCALACAELLYRAGLPRALYAIVPGPGSVVGTAITDNCDY--LMFTGSSATGSRLAEHAGR-RLIGFSAELGGKNPMIVARGANLDKVAKAATRACFSNAGQLCISIERIYVEKDIAEEFTRK 307
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: GAPN_STRMU (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Streptococcus mutans GN=gapN PE=1 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 2.855e-24 Identity = 63/164 (38.41%), Postives = 90/164 (54.88%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAR 492 G+ I P+N+P+ L K+APAL GN I K Q ++ L +A+ F EAGLP GV N ++G G G + H V+ ++FTG G+ + ++A ++P+ LELGGK I+ +DAD++ + F GQ C A R V E V DE VEK R Sbjct: 145 GLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMA---GMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIR 305
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ROCA_GEOTN (1-pyrroline-5-carboxylate dehydrogenase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=rocA PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.729e-24 Identity = 65/167 (38.92%), Postives = 86/167 (51.50%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN-----LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486 GV I PWNFP + AL GNT++LK A TP+ A A++ EAGLP GVLN + G G G L H +SFTG D G + E AAK LK V E+GGK ++ +AD++ A + + F GQ C A SR + E VYD+ + + Sbjct: 173 GVGVVISPWNFPFAIMAGTTVAALVTGNTVLLKPASATPVVAYKFAEVLEEAGLPAGVLNYIPGSGAEVGDYLVEHPRTRFISFTGSRDVGIRIYERAAKVQPGQIWLKRVIAEMGGKDAIVVDKEADLELAAQSIVASAFGFSGQKCSACSRAIIVEDVYDQVLNR 339
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: GABD2_MYCS2 (Putative succinate-semialdehyde dehydrogenase [NADP+] OS=Mycobacterium smegmatis GN=gabD2 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.729e-24 Identity = 67/162 (41.36%), Postives = 85/162 (52.47%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486 GV G I PWN+P+ L PAL GN +V+K QTP L A+L +EAGLP + VV G G G A+ + D L FTG TG+ + E + L + ELGGK+P I+ A +D A + A A F N GQ C + R YV V DEF K Sbjct: 149 GVVGVISPWNYPMALSISDSIPALLAGNAVVVKPDSQTPYCTLANAELLYEAGLPRDLFAVVPGPGSVVGTAIVENCDY--LMFTGSTATGRTLAEQCGR-RLIGFSAELGGKNPMIVTRGAKLDVAAKAATRACFSNAGQLCISIERIYVERAVADEFTAK 307
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ASTD_AERHH (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=astD PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 4.870e-24 Identity = 65/162 (40.12%), Postives = 88/162 (54.32%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486 GV P+NFP L + PAL GNT+V K +E TP+ A + K++ EAGLP GVLN+V G T G ALA + D+D L FTG TG + + A K + LE+GG +P I+ D +D+D AV + F GQ C R +V V + + K Sbjct: 139 GVVAVFGPYNFPGHLPNGHIVPALIAGNTVVFKPSELTPMVAEAMLKIWQEAGLPKGVLNLVQGEVDT-GKALAGNPDIDGLFFTGSSRTGHFLHQQFAGQPGKILALEMGGNNPLIVKDVSDIDGAVHAIVQSAFITSGQRCTCSRRLFVERSVQGDALVK 299
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: GABD2_MYCUA (Putative succinate-semialdehyde dehydrogenase [NADP+] 2 OS=Mycobacterium ulcerans (strain Agy99) GN=gabD2 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 6.360e-24 Identity = 65/162 (40.12%), Postives = 86/162 (53.09%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486 GV G I PWN+P+ L PAL GN +VLK QTP AL A+L + AGLP + +V G G G A+A + D L FTG TG + E A + L + ELGGK+ I+ ++D+ + A A F N GQ C + R YV + + DEF K Sbjct: 149 GVVGVISPWNYPMTLTASDSVPALIAGNAVVLKPDSQTPYCALACAELLYRAGLPRALYAIVPGPGSVVGTAIADNCDY--LMFTGSSATGSRLAERAGR-RLIGFSAELGGKNAMIVTRGVNLDKVAKAATRACFSNAGQLCISIERIYVEKDIADEFTRK 307
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ROCA_GEOSW (1-pyrroline-5-carboxylate dehydrogenase OS=Geobacillus sp. (strain WCH70) GN=rocA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 6.619e-24 Identity = 64/167 (38.32%), Postives = 87/167 (52.10%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN-----LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486 GV I PWNFP + +L GNT++LK A TP+ A A++ EAGLP GVLN + G G G L H +SFTG D G + E AAK + LK V E+GGK ++ +AD++ A + + F GQ C A SR + E VYD+ + + Sbjct: 173 GVGVVISPWNFPFAIMAGTTVASLVTGNTVLLKPASATPVVAYKFAEVLEEAGLPAGVLNYIPGSGAEVGDYLVDHPRTRFISFTGSRDVGIRIYERAAKVHPGQIWLKRVIAEMGGKDGIVVDKEADLELAAQSIVASAFGFSGQKCSACSRAIIVEDVYDQVLNR 339 HSP 2 Score: 21.557 bits (44), Expect = 6.619e-24 Identity = 7/16 (43.75%), Postives = 11/16 (68.75%), Query Frame = 2 Query: 545 GPQIDPEQFEKVLKYI 592 GP ID + K+++YI Sbjct: 360 GPVIDQSAYNKIMEYI 375
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ROCA_STAHJ (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=rocA PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.620e-24 Identity = 64/168 (38.10%), Postives = 86/168 (51.19%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA-----KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 489 G I PWNFP + + GNT++LK AE T LTA + ++ EAGLP GV+N V G G L + ++FTG TG + E +A ++ LK V E+GGK ++ ++ D D A E + F GQ C A SR VH VYDE +EKA Sbjct: 173 GTGVTIPPWNFPFAIMAGTTLAPVVAGNTVLLKPAEDTVLTAYKLIEILEEAGLPKGVVNFVPGDPKEIGDYLVDSVHTHFVTFTGSRATGTRIYERSAVVQEGQTFLKRVIAEMGGKDAIVVDENIDTDLAAESIITSAFGFSGQKCSACSRAIVHSSVYDEVLEKA 340 HSP 2 Score: 24.2534 bits (51), Expect = 6.620e-24 Identity = 9/16 (56.25%), Postives = 13/16 (81.25%), Query Frame = 2 Query: 545 GPQIDPEQFEKVLKYI 592 GP I+ +QF+K+ KYI Sbjct: 359 GPVINKKQFDKIKKYI 374 The following BLAST results are available for this feature:
BLAST of FC869243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869243 ID=FC869243; Name=FC869243; organism=Citrus clementina; type=EST; length=596bpback to top |