FC869243

Overview
NameFC869243
Unique NameFC869243
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length596
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: IOLA2_GEOKA (Methylmalonate semialdehyde dehydrogenase [acylating] 2 OS=Geobacillus kaustophilus GN=iolA2 PE=3 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 8.307e-24
Identity = 67/162 (41.36%), Postives = 90/162 (55.56%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV G I P+NFP+++  W    A+ CGNT VLK +E+TP+ A  +A+LF EAGLP GVLN+V G        L  H DV  +SF G    G+ V + AA ++ K V    G K+  I+  DAD++ AV     A F + G+ C A S       + DE VEK
Sbjct:  145 GVVGGITPFNFPMMVPCWMFPLAIACGNTFVLKPSERTPMLANRLAELFKEAGLPDGVLNIVHGAHDVVN-GLLEHPDVKAISFVGSQPVGEYVYKTAA-AHGKRVQALTGAKNHSIVMPDADLNVAVREIINAAFGSAGERCMAASVVVAVGEIADELVEK 304          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ASTD_ENT38 (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Enterobacter sp. (strain 638) GN=astD PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 8.307e-24
Identity = 64/151 (42.38%), Postives = 83/151 (54.97%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYV 453
            GV     P+NFP  L    + PAL  GNT++ K +E TP +   V KL+ +AGLPPGVLN+V G G   G AL++  D+D L FTG   TG  +    A    K + LE+GG +P I+ D  D+D AV LA  + F   GQ C    R  V
Sbjct:  136 GVLAVFGPYNFPGHLPNGHIVPALLAGNTVIFKPSELTPWSGEAVVKLWEQAGLPPGVLNLVQG-GRETGQALSALSDLDGLLFTGSAGTGYQLHRQLAGQPEKILALEMGGNNPLIVEDPEDIDAAVHLAIQSAFVTAGQRCTCARRLLV 285          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ROCA_STAAS (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain MSSA476) GN=rocA PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.121e-23
Identity = 63/168 (37.50%), Postives = 85/168 (50.60%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA-----KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 489
            G    I PWNFP  +        +  GN ++LK AE TP  A  +  +  EAGLP GV+N V G     G  L  H D   ++FTG   TG  + E +A     ++ LK V  E+GGK   ++ ++ D D A E    + F   GQ C A SR  VH+ VYDE +EK+
Sbjct:  173 GTGVTIPPWNFPFAIMAGTTLAPVVAGNIVLLKPAEDTPYIAYKLMGILEEAGLPKGVVNFVPGDPKEIGDYLVDHKDTHFVTFTGSRATGTRIYERSAVVQEGQNFLKRVIAEMGGKDAIVVDENIDTDMAAEAIVTSAFGFSGQKCSACSRAIVHKDVYDEVLEKS 340          

HSP 2 Score: 22.3274 bits (46), Expect = 1.121e-23
Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 2
Query:  545 GPQIDPEQFEKVLKYI 592
            GP I+ +QF+K+  YI
Sbjct:  359 GPVINKKQFDKIKNYI 374          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ASTD_AERS4 (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Aeromonas salmonicida (strain A449) GN=astD PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.417e-23
Identity = 64/151 (42.38%), Postives = 84/151 (55.63%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYV 453
            GV     P+NFP  L    + PAL  GNT+V K +E TP+ A  + K++ EAGLP GVLN+V G   T G ALA + D+D L FTG   TG  + +  A    K + LE+GG +P I+ D +DVD AV     + F   GQ C    R +V
Sbjct:  139 GVVAVFGPYNFPGHLPNGHIVPALIAGNTVVFKPSELTPMVAEAMLKIWQEAGLPKGVLNLVQGEVET-GKALAGNPDIDGLFFTGSSRTGHFLHQQFAGQPGKILALEMGGNNPLIVKDVSDVDGAVHAIVQSAFITSGQRCTCSRRLFV 288          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ROCA_GEOKA (1-pyrroline-5-carboxylate dehydrogenase OS=Geobacillus kaustophilus GN=rocA PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.458e-23
Identity = 63/167 (37.72%), Postives = 86/167 (51.50%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN-----LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV   I PWNFP  +       +L  GNT++LK A  TP+ A    ++  EAGLP GVLN + G G   G  L  H     +SFTG  D G  + E AAK +     LK V  E+GGK   ++  +AD++ A +    + F   GQ C A SR  + E VYD+ + +
Sbjct:  173 GVGVVISPWNFPFAIMAGTTVASLVTGNTVLLKPASATPVVAYKFVEVLEEAGLPAGVLNYIPGSGAEVGDYLVDHPRTRFISFTGSRDVGIRIYERAAKVHPGQIWLKRVIAEMGGKDAIVVDKEADLELAAQSIVASAFGFSGQKCSACSRAIIVEDVYDQVLSR 339          

HSP 2 Score: 21.557 bits (44), Expect = 1.458e-23
Identity = 7/16 (43.75%), Postives = 11/16 (68.75%), Query Frame = 2
Query:  545 GPQIDPEQFEKVLKYI 592
            GP ID   + K+++YI
Sbjct:  360 GPVIDQNAYNKIMEYI 375          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ROCA_ANOFW (1-pyrroline-5-carboxylate dehydrogenase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=rocA PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.458e-23
Identity = 64/167 (38.32%), Postives = 85/167 (50.90%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN-----LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV   I PWNFP  +       AL  GNT++LK A  TP+ A    ++  EAGLP GVLN + G G   G  L  H     +SFTG  D G  + E AAK +     LK V  E+GGK   ++  +AD++ A +    + F   GQ C A SR    E VYD+ + +
Sbjct:  173 GVGVVISPWNFPFAIMAGTTVAALVTGNTVLLKPASATPVVAYKFVEVLEEAGLPAGVLNYIPGSGAEVGDYLVDHPRTRFISFTGSRDVGIRIYERAAKVHPGQIWLKRVIAEMGGKDTIVVDKEADLELAAQSIVASAFGFSGQKCSACSRVVALEDVYDQVLNR 339          

HSP 2 Score: 21.557 bits (44), Expect = 1.458e-23
Identity = 7/16 (43.75%), Postives = 11/16 (68.75%), Query Frame = 2
Query:  545 GPQIDPEQFEKVLKYI 592
            GP ID   + K+++YI
Sbjct:  360 GPVIDQSAYNKIMEYI 375          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: IOLA_BACP2 (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus pumilus (strain SAFR-032) GN=iolA PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 4.123e-23
Identity = 62/162 (38.27%), Postives = 88/162 (54.32%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV G I P+NFP+++  W    A+ CGNT VLK +E+TP+ A  +A+LF EAGLP GVLN+V+G        L  H  V  +SF G     + V +   +   K V    G K+  I+  DAD+D A +    A F + G+ C A +   V E V D+ ++K
Sbjct:  146 GVIGGITPFNFPMMVPCWMFPLAIACGNTFVLKPSERTPILAARLAELFEEAGLPKGVLNIVNGAHDVVN-GLLEHQKVKAISFVGSQPVAEYVYKKGTEHG-KRVQALAGAKNHSIVLKDADLDAATKQIIGAAFGSAGERCMAAAVVAVEEEVADDLIQK 305          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: IOLA3_GEOKA (Methylmalonate semialdehyde dehydrogenase [acylating] 3 OS=Geobacillus kaustophilus GN=iolA3 PE=3 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 4.123e-23
Identity = 65/164 (39.63%), Postives = 90/164 (54.88%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAR 492
            GV   I P+NFP+++  W    A+ CGNT VLK +E+TP+ A  +A+LF EAGLPPGVLN+V G     G  L  H D+  +SF G     + V + AA ++ K V    G K+  I+  DAD+D AV     A F + G+ C A S       + DE V + +
Sbjct:  144 GVVAGITPFNFPMMVPCWMFPLAIACGNTFVLKPSERTPMLANRLAELFTEAGLPPGVLNIVHGAHEVVGGIL-EHKDIKAVSFVGSQPVAEYVYKTAA-AHGKRVQALAGAKNHSIVMPDADLDMAVTNIINAAFGSAGERCMACSVVVAVGDIADELVRRLK 305          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: IOLA1_GEOTN (Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Geobacillus thermodenitrificans (strain NG80-2) GN=iolA1 PE=3 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 5.384e-23
Identity = 66/162 (40.74%), Postives = 89/162 (54.94%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV G I P+NFP+++  W    A+ CGNT VLK +E+TP+ A  +A+LF EAGLP GVLN+V G        L  H DV  +SF G    G+ V + AA ++ K V    G K+  I+  DAD+  AV     A F + G+ C A S       + DE VE+
Sbjct:  145 GVVGGITPFNFPMMVPCWMFPLAIACGNTFVLKPSERTPMLANRLAELFKEAGLPDGVLNIVHGAHDVVN-GLLEHPDVKAISFVGSQPVGEYVYKTAA-AHGKRVQALTGAKNHSIVMPDADLKVAVREIINAAFGSAGERCMAASVVVAVGDIADELVER 304          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ASTD_SHEPA (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=astD PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 5.384e-23
Identity = 69/180 (38.33%), Postives = 94/180 (52.22%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVH-----ERVYDEFVEKARHVQ*GVLLAIP 525
            GV     P+NFP  L    + PAL  GNT+V K +E TP  A  + KL+ +AGLP GV+N+V G   T G ALA+H  +D L FTG   TG I+ +  A    K + LE+GG +P II D AD   AV     + + + GQ C    R YV      + + ++ V   + +Q G   A P
Sbjct:  136 GVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPKVAELMLKLWEKAGLPKGVINLVQGEVET-GKALAAHPQIDGLFFTGSSRTGHILHQQYAGDPGKILALEMGGNNPLIIKDVADTKAAVHDIIQSAYISAGQRCTCARRLYVEKGAAGDALLEQLVAAVKQIQVGPWNAQP 314          
The following BLAST results are available for this feature:
BLAST of FC869243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
IOLA2_GEOKA8.307e-2441.36Methylmalonate semialdehyde dehydrogenase [acylati... [more]
ASTD_ENT388.307e-2442.38N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ROCA_STAAS1.121e-2337.501-pyrroline-5-carboxylate dehydrogenase OS=Staphyl... [more]
ASTD_AERS41.417e-2342.38N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ROCA_GEOKA1.458e-2337.721-pyrroline-5-carboxylate dehydrogenase OS=Geobaci... [more]
ROCA_ANOFW1.458e-2338.321-pyrroline-5-carboxylate dehydrogenase OS=Anoxyba... [more]
IOLA_BACP24.123e-2338.27Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA3_GEOKA4.123e-2339.63Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA1_GEOTN5.384e-2340.74Methylmalonate semialdehyde dehydrogenase [acylati... [more]
ASTD_SHEPA5.384e-2338.33N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]

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Properties
Property NameValue
Genbank descriptionC31010B01EF AbioticL1 Citrus clementina cDNA clone C31010B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869243 ID=FC869243; Name=FC869243; organism=Citrus clementina; type=EST; length=596bp
GGCGTTGCTGGCCAGATAGTTCCCTGGAACTTTCCTCTTCTCTTGTTTAC
TTGGAAAGTAGCGCCTGCACTAACTTGTGGCAATACTATTGTTCTAAAGT
CTGCTGAGCAAACGCCTTTGACTGCTCTGTATGTGGCAAAGCTATTCCAT
GAGGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCC
AACAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTT
TTACAGGACACTGTGATACTGGTAAGATTGTTCAGGAACTGGCTGCAAAA
AGCAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTAT
AATATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTG
CTTTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTAT
GTACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAGGCACGTGCA
ATGAGGCGTATTGTTGGCGATCCCTTCAGAGTGGTGTTGAACAAGGTCCT
CAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAAGTACATAAGGT
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