FC869243
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ASTD_BURPS (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Burkholderia pseudomallei GN=astD PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.672e-22 Identity = 62/163 (38.04%), Postives = 86/163 (52.76%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY-DEFVEK 486 GV P+NFP L + PAL GNT+V K +E P A +++ +AGLP GVLN+V G T G ALA+H +D L FTG DTG ++ + LE+GG +P ++ D D+D AV A + F + GQ C R V + D F+E+ Sbjct: 137 GVVAVFGPYNFPGHLPNGHIVPALIAGNTVVFKPSELAPGVARATVEIWRDAGLPAGVLNLVQGEKDT-GVALANHRQIDGLFFTGSSDTGTLLHRQFGGRPEIVLALEMGGNNPLVVADVEDIDAAVHHAIQSAFLSAGQRCTCARRILVPRGAFGDRFLER 298
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ASTD_BURP6 (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Burkholderia pseudomallei (strain 668) GN=astD PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.672e-22 Identity = 62/163 (38.04%), Postives = 86/163 (52.76%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY-DEFVEK 486 GV P+NFP L + PAL GNT+V K +E P A +++ +AGLP GVLN+V G T G ALA+H +D L FTG DTG ++ + LE+GG +P ++ D D+D AV A + F + GQ C R V + D F+E+ Sbjct: 137 GVVAVFGPYNFPGHLPNGHIVPALIAGNTVVFKPSELAPGVARATVEIWRDAGLPAGVLNLVQGEKDT-GVALANHRQIDGLFFTGSSDTGTLLHRQFGGRPEIVLALEMGGNNPLVVADVEDIDAAVHHAIQSAFLSAGQRCTCARRILVPRGAFGDRFLER 298
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ASTD_BURP1 (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Burkholderia pseudomallei (strain 1710b) GN=astD PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.672e-22 Identity = 62/163 (38.04%), Postives = 86/163 (52.76%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY-DEFVEK 486 GV P+NFP L + PAL GNT+V K +E P A +++ +AGLP GVLN+V G T G ALA+H +D L FTG DTG ++ + LE+GG +P ++ D D+D AV A + F + GQ C R V + D F+E+ Sbjct: 137 GVVAVFGPYNFPGHLPNGHIVPALIAGNTVVFKPSELAPGVARATVEIWRDAGLPAGVLNLVQGEKDT-GVALANHRQIDGLFFTGSSDTGTLLHRQFGGRPEIVLALEMGGNNPLVVADVEDIDAAVHHAIQSAFLSAGQRCTCARRILVPRGAFGDRFLER 298
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ASTD_BURP0 (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Burkholderia pseudomallei (strain 1106a) GN=astD PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.672e-22 Identity = 62/163 (38.04%), Postives = 86/163 (52.76%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY-DEFVEK 486 GV P+NFP L + PAL GNT+V K +E P A +++ +AGLP GVLN+V G T G ALA+H +D L FTG DTG ++ + LE+GG +P ++ D D+D AV A + F + GQ C R V + D F+E+ Sbjct: 137 GVVAVFGPYNFPGHLPNGHIVPALIAGNTVVFKPSELAPGVARATVEIWRDAGLPAGVLNLVQGEKDT-GVALANHRQIDGLFFTGSSDTGTLLHRQFGGRPEIVLALEMGGNNPLVVADVEDIDAAVHHAIQSAFLSAGQRCTCARRILVPRGAFGDRFLER 298
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ASTD_BURMS (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Burkholderia mallei (strain SAVP1) GN=astD PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.672e-22 Identity = 62/163 (38.04%), Postives = 86/163 (52.76%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY-DEFVEK 486 GV P+NFP L + PAL GNT+V K +E P A +++ +AGLP GVLN+V G T G ALA+H +D L FTG DTG ++ + LE+GG +P ++ D D+D AV A + F + GQ C R V + D F+E+ Sbjct: 137 GVVAVFGPYNFPGHLPNGHIVPALIAGNTVVFKPSELAPGVARATVEIWRDAGLPAGVLNLVQGEKDT-GVALANHRQIDGLFFTGSSDTGTLLHRQFGGRPEIVLALEMGGNNPLVVADVEDIDAAVHHAIQSAFLSAGQRCTCARRILVPRGAFGDRFLER 298
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ASTD_BURMA (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Burkholderia mallei GN=astD PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.672e-22 Identity = 62/163 (38.04%), Postives = 86/163 (52.76%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY-DEFVEK 486 GV P+NFP L + PAL GNT+V K +E P A +++ +AGLP GVLN+V G T G ALA+H +D L FTG DTG ++ + LE+GG +P ++ D D+D AV A + F + GQ C R V + D F+E+ Sbjct: 137 GVVAVFGPYNFPGHLPNGHIVPALIAGNTVVFKPSELAPGVARATVEIWRDAGLPAGVLNLVQGEKDT-GVALANHRQIDGLFFTGSSDTGTLLHRQFGGRPEIVLALEMGGNNPLVVADVEDIDAAVHHAIQSAFLSAGQRCTCARRILVPRGAFGDRFLER 298
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: IOLA2_GEOTN (Methylmalonate semialdehyde dehydrogenase [acylating] 2 OS=Geobacillus thermodenitrificans (strain NG80-2) GN=iolA2 PE=3 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 3.490e-22 Identity = 65/164 (39.63%), Postives = 87/164 (53.05%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAR 492 GV I P+NFP+++ W A+ CGNT VLK +E+TPL A +A+LF EAGLP GVLN+V G L H D+ +SF G + V + AA K V G K+ I+ DAD+D AV A F + G+ C A S + DE VE+ + Sbjct: 144 GVVAGITPFNFPMMVPCWMFPLAIACGNTFVLKPSERTPLLANRLAELFTEAGLPAGVLNIVHGAHEVVNGIL-EHKDIKAVSFVGSQPVAEYVYKTAAAYG-KRVQALAGAKNHSIVMPDADLDMAVTNIINAAFGSAGERCMACSVVVAVGDIADELVERLK 305
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: GABD1_MYCPA (Succinate-semialdehyde dehydrogenase [NADP+] OS=Mycobacterium paratuberculosis GN=gabD1 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.490e-22 Identity = 62/162 (38.27%), Postives = 81/162 (50.00%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486 GV ++PWNFPL APAL GN +LK A P +ALY+A + G P G + +A + V + TG G+ V +A +KP LELGG PFI+ AD+D+AV+ A A N GQ C A R VH +YD FV+K Sbjct: 126 GVVLAVMPWNFPLWQAVRFAAPALMAGNVGILKHASNVPQSALYLADVITRGGFPEGCFQTLL-VPSSAVERILRDPRVAAATLTGSEPAGQSVAAIAG-DEIKPTVLELGGSDPFIVMPSADLDEAVKTAVTARVQNNGQSCIAAKRFIVHTDIYDAFVDK 285
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: GABD1_MYCA1 (Succinate-semialdehyde dehydrogenase [NADP+] OS=Mycobacterium avium (strain 104) GN=gabD1 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.490e-22 Identity = 62/162 (38.27%), Postives = 81/162 (50.00%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486 GV ++PWNFPL APAL GN +LK A P +ALY+A + G P G + +A + V + TG G+ V +A +KP LELGG PFI+ AD+D+AV+ A A N GQ C A R VH +YD FV+K Sbjct: 126 GVVLAVMPWNFPLWQAVRFAAPALMAGNVGILKHASNVPQSALYLADVITRGGFPEGCFQTLL-VPSSAVERILRDPRVAAATLTGSEPAGQSVAAIAG-DEIKPTVLELGGSDPFIVMPSADLDEAVKTAVTARVQNNGQSCIAAKRFIVHTDIYDTFVDK 285
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ASTD_VIBPA (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Vibrio parahaemolyticus GN=astD PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.490e-22 Identity = 63/152 (41.45%), Postives = 82/152 (53.95%), Query Frame = 1 Query: 1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDD-ADVDQAVELAHFALFYNQGQCCCAGSRTYV 453 GV P+NFP L + PAL GNT+V K +EQTP T KL+ EAGLP GV+N+V G T G ALA +D + FTG +TG I+ A K + LE+GG +P +I D+ D+D V + F + GQ C R YV Sbjct: 136 GVMAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSEQTPWTGELAMKLWEEAGLPKGVINLVQGAKET-GIALADAKGIDGILFTGSANTGHILHRQFAGQPGKMLALEMGGNNPMVISDNYGDLDATVYTIIQSAFISAGQRCTCARRLYV 286 The following BLAST results are available for this feature:
BLAST of FC869243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869243 ID=FC869243; Name=FC869243; organism=Citrus clementina; type=EST; length=596bpback to top |